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Carg13970 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13970
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioninactive protein RESTRICTED TEV MOVEMENT 2-like
Genome locationCarg_Chr02:6905717..6907864
RNA-Seq ExpressionCarg13970
SyntenyCarg13970
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR045045 - Small heat shock protein RTM2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605846.1 Inactive protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. sororia]1.6e-86100Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
        GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS

Query:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
        SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
Subjt:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL

KAG7035794.1 Inactive protein RESTRICTED TEV MOVEMENT 2, partial [Cucurbita argyrosperma subsp. argyrosperma]5.1e-93100Show/hide
Query:  MSNETLDPLTKGFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNG
        MSNETLDPLTKGFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNG
Subjt:  MSNETLDPLTKGFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNG

Query:  QQQAEEPEKKSSPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
        QQQAEEPEKKSSPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
Subjt:  QQQAEEPEKKSSPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL

XP_022958345.1 inactive protein RESTRICTED TEV MOVEMENT 2-like [Cucurbita moschata]1.8e-8598.85Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
        GFRREQIRVQVSSTRKLRISGERPY+NKTWQRFHKEFEIPSNCTTS ITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS

Query:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
        SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
Subjt:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL

XP_022995333.1 uncharacterized protein LOC111490909 [Cucurbita maxima]4.7e-7891.95Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
        GFR+EQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPR+AAPNPPPP QQQ+NGQQQAE+PEKKS
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS

Query:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
        SPA NGKA+AKS+REREGS+CNGDKI+ RAGRLKEVAPGLLGKF+L VLAAVLLFLLAKRLDQNMAGGA ESRL
Subjt:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL

XP_023534144.1 uncharacterized protein LOC111795792 [Cucurbita pepo subsp. pepo]1.6e-8195.98Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
        GFRREQIRVQVSSTRKLRISGERPYRNKT QRFHKEFEIPSNCTTS ITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPP QQQQNGQQQAEEPEKKS
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS

Query:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
        SPAANGKAEAKSN EREGS+CNGDKI+ RAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
Subjt:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL

TrEMBL top hitse value%identityAlignment
A0A1S3BMF5 uncharacterized protein LOC1034916222.2e-1745.29Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNK---TWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPE
        GF +EQI+VQVSS RKLRISGER  ++    T QRF+KEFEIPSNC T+ ITAKYK GILHVRQPLQ QD S              +QQ +     E+ E
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNK---TWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPE

Query:  KKSSPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVL--AAVLLFLLAKRLDQNM
         K +  A+   E  S+  +     NG        RLKE  P +  K +LP+L  +A+LL   A+ L   M
Subjt:  KKSSPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVL--AAVLLFLLAKRLDQNM

A0A5D3DDX4 Circumsporozoite protein-like2.2e-1745.29Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNK---TWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPE
        GF +EQI+VQVSS RKLRISGER  ++    T QRF+KEFEIPSNC T+ ITAKYK GILHVRQPLQ QD S              +QQ +     E+ E
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNK---TWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPE

Query:  KKSSPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVL--AAVLLFLLAKRLDQNM
         K +  A+   E  S+  +     NG        RLKE  P +  K +LP+L  +A+LL   A+ L   M
Subjt:  KKSSPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVL--AAVLLFLLAKRLDQNM

A0A6J1DIF9 inactive protein RESTRICTED TEV MOVEMENT 2-like1.4e-3556.74Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
        GF +EQIRVQVSST KLRISGERPYRNK WQRFHKEF+IP NC TS ITAKYK GILHVRQPL+ +  S+     AP   PP+QQ    Q+QAE PEKKS
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS

Query:  SPAANGKAEAKSNREREGSTCNG---------------DKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQ
        + AA+G AEA+ ++E   +  +                DKI  +AGRLKE+  G + K ILP+L A LLFL AKRL++
Subjt:  SPAANGKAEAKSNREREGSTCNG---------------DKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQ

A0A6J1H377 inactive protein RESTRICTED TEV MOVEMENT 2-like8.6e-8698.85Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
        GFRREQIRVQVSSTRKLRISGERPY+NKTWQRFHKEFEIPSNCTTS ITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS

Query:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
        SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
Subjt:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL

A0A6J1K7M4 uncharacterized protein LOC1114909092.3e-7891.95Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
        GFR+EQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPR+AAPNPPPP QQQ+NGQQQAE+PEKKS
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS

Query:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL
        SPA NGKA+AKS+REREGS+CNGDKI+ RAGRLKEVAPGLLGKF+L VLAAVLLFLLAKRLDQNMAGGA ESRL
Subjt:  SPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G53540.1 HSP20-like chaperones superfamily protein2.8e-0432.1Show/hide
Query:  GFRREQIRVQVSSTRKLRISGER----PYRNKTWQR-------FHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSE
        G R+E+++V+V     L+ISGER      +N  W R       F + F +P N    +I A  ++G+L V  P  P+   E
Subjt:  GFRREQIRVQVSSTRKLRISGER----PYRNKTWQR-------FHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSE

AT2G27140.1 HSP20-like chaperones superfamily protein5.8e-1031.35Show/hide
Query:  ETLDPLTKGFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQP------LQPQDV---SEPPRTAAPNP----
        E L     GFR+EQ++VQV++TRKLR+ G+RP     W RF KEF IP N     ++AK++   L VR P       QP  +   ++PP     NP    
Subjt:  ETLDPLTKGFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQP------LQPQDV---SEPPRTAAPNP----

Query:  -------PPPQQQQQNGQQQAEEPEKKSSP-AANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFL
                PP++ ++N  +  ++ EK  SP  A    EA +   R       + + G    +K     L    ++P  A +LL L
Subjt:  -------PPPQQQQQNGQQQAEEPEKKSSP-AANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFL

AT3G46230.1 heat shock protein 17.43.6e-0431.51Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNK----TWQR-------FHKEFEIPSNCTTSKITAKYKDGILHVRQP
        G ++E+++V+V     L+ISGER   N+    TW R       F + F +P N    ++ A  ++G+L V  P
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNK----TWQR-------FHKEFEIPSNCTTSKITAKYKDGILHVRQP

AT5G04890.1 HSP20-like chaperones superfamily protein1.3e-0428.93Show/hide
Query:  GFRREQIRV-QVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQP-QDVSEPPRT----AAPNPPPPQQQQQNGQQQAE
        GF +EQ++V  V S++ +R++GERP  N+ W RF++ F +P NC   KI   +K+ +L +  P +    V+  P T    AA      + +++   +++ 
Subjt:  GFRREQIRV-QVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQP-QDVSEPPRT----AAPNPPPPQQQQQNGQQQAE

Query:  EPEKKSSPAANGKAEAKSNRE
          EK+   A   K +    +E
Subjt:  EPEKKSSPAANGKAEAKSNRE

AT5G20970.1 HSP20-like chaperones superfamily protein4.4e-1033.03Show/hide
Query:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS
        GF++EQ++V V++TRKLR++GERP     W RFH+E  +P       ++A +KD  L++R P    ++   P+T  P P   +   Q+ ++Q + P+   
Subjt:  GFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKKS

Query:  SPAANGKAE
           + GK +
Subjt:  SPAANGKAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAACGAGACATTAGATCCGTTAACCAAAGGTTTTCGCAGAGAGCAAATTCGGGTTCAAGTATCCTCCACAAGAAAGCTGAGGATCTCCGGCGAGCGGCCTTACCG
GAACAAGACATGGCAGCGTTTCCACAAGGAGTTTGAAATCCCATCAAACTGCACCACCTCTAAAATTACAGCCAAGTACAAGGACGGCATCCTTCATGTCCGTCAGCCAT
TGCAGCCACAGGACGTGTCGGAGCCGCCACGCACGGCAGCTCCCAACCCACCGCCACCGCAGCAGCAGCAGCAAAATGGCCAGCAACAAGCTGAGGAACCAGAGAAGAAG
AGCAGCCCAGCCGCCAATGGAAAAGCGGAAGCCAAAAGCAATAGAGAAAGAGAAGGAAGTACTTGCAACGGTGACAAGATCAGTGGTCGAGCTGGGCGGCTGAAGGAGGT
GGCTCCTGGATTGTTGGGGAAGTTTATTTTGCCTGTTTTGGCGGCTGTGTTGCTTTTCCTGTTGGCTAAGAGGTTGGATCAGAACATGGCTGGTGGAGCCGGAGAATCTC
GGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAACGAGACATTAGATCCGTTAACCAAAGGTTTTCGCAGAGAGCAAATTCGGGTTCAAGTATCCTCCACAAGAAAGCTGAGGATCTCCGGCGAGCGGCCTTACCG
GAACAAGACATGGCAGCGTTTCCACAAGGAGTTTGAAATCCCATCAAACTGCACCACCTCTAAAATTACAGCCAAGTACAAGGACGGCATCCTTCATGTCCGTCAGCCAT
TGCAGCCACAGGACGTGTCGGAGCCGCCACGCACGGCAGCTCCCAACCCACCGCCACCGCAGCAGCAGCAGCAAAATGGCCAGCAACAAGCTGAGGAACCAGAGAAGAAG
AGCAGCCCAGCCGCCAATGGAAAAGCGGAAGCCAAAAGCAATAGAGAAAGAGAAGGAAGTACTTGCAACGGTGACAAGATCAGTGGTCGAGCTGGGCGGCTGAAGGAGGT
GGCTCCTGGATTGTTGGGGAAGTTTATTTTGCCTGTTTTGGCGGCTGTGTTGCTTTTCCTGTTGGCTAAGAGGTTGGATCAGAACATGGCTGGTGGAGCCGGAGAATCTC
GGCTGTGA
Protein sequenceShow/hide protein sequence
MSNETLDPLTKGFRREQIRVQVSSTRKLRISGERPYRNKTWQRFHKEFEIPSNCTTSKITAKYKDGILHVRQPLQPQDVSEPPRTAAPNPPPPQQQQQNGQQQAEEPEKK
SSPAANGKAEAKSNREREGSTCNGDKISGRAGRLKEVAPGLLGKFILPVLAAVLLFLLAKRLDQNMAGGAGESRL