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Carg13975 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13975
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:6803032..6803271
RNA-Seq ExpressionCarg13975
SyntenyCarg13975
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040112.1 hypothetical protein E6C27_scaffold366G00870 [Cucumis melo var. makuwa]5.7e-2583.78Show/hide
Query:  SLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS
        +LIVLSVAHLSAD SQ IAR PD LTSHQLLY+LF++PLQQLSRLALS+WTF CVPPPGSFYYYYYSSD D SS
Subjt:  SLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS

KAF3966134.1 hypothetical protein CMV_009733 [Castanea mollissima]1.6e-1968.35Show/hide
Query:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSSE
        MVFNSL+VLSVAHLSADA QCIA +P+RL+SHQLL ++  +PLQQL RLAL +WTFLC+PPP SFY Y Y S   SS +
Subjt:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSSE

PON98040.1 hypothetical protein TorRG33x02_061140 [Trema orientale]8.5e-2170.51Show/hide
Query:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS
        MVFNSL+VLSVAH+SADA QC+A  P+RL+SHQLL ++F +PLQQL RLAL +WTFLC+PPP SFY Y YSSD D  S
Subjt:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS

XP_022153861.1 uncharacterized protein LOC111021275 [Momordica charantia]1.4e-2887.18Show/hide
Query:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS
        MVF+SLIVLSVAHLSADASQCIA  PDRLTSHQLLY+LF +PLQQLSRLALS WTF CVPPPGSFYYYYYSSD D+SS
Subjt:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS

XP_022958637.1 uncharacterized protein LOC111459803 [Cucurbita moschata]4.6e-35100Show/hide
Query:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSSE
        MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSSE
Subjt:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSSE

TrEMBL top hitse value%identityAlignment
A0A0A0L0B8 Uncharacterized protein3.6e-2582.67Show/hide
Query:  NSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS
        N  IVLSVAHLSADASQ IAR PD LTSHQLLY+LF++PLQQLSRLALS+WT  CVPPPGSFYYYYYSSD D SS
Subjt:  NSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS

A0A2P5FJR7 Uncharacterized protein4.1e-2170.51Show/hide
Query:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS
        MVFNSL+VLSVAH+SADA QC+A  P+RL+SHQLL ++F +PLQQL RLAL +WTFLC+PPP SFY Y YSSD D  S
Subjt:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS

A0A5A7T9K4 Uncharacterized protein2.8e-2583.78Show/hide
Query:  SLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS
        +LIVLSVAHLSAD SQ IAR PD LTSHQLLY+LF++PLQQLSRLALS+WTF CVPPPGSFYYYYYSSD D SS
Subjt:  SLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS

A0A6J1DKC2 uncharacterized protein LOC1110212757.0e-2987.18Show/hide
Query:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS
        MVF+SLIVLSVAHLSADASQCIA  PDRLTSHQLLY+LF +PLQQLSRLALS WTF CVPPPGSFYYYYYSSD D+SS
Subjt:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS

A0A6J1H2D5 uncharacterized protein LOC1114598032.3e-35100Show/hide
Query:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSSE
        MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSSE
Subjt:  MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSSE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G55365.1 unknown protein8.5e-1145Show/hide
Query:  MVFNSLIVLSVAHLSADASQCIARSP--DRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS
        MVFNS +V++VA +S D  Q I R P   R+ + QL  +   +P+ QLSR  L +WTF+C+P   SFY Y Y +   SSS
Subjt:  MVFNSLIVLSVAHLSADASQCIARSP--DRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSS

AT5G56520.1 unknown protein3.6e-0943.48Show/hide
Query:  MVFNSLIVLSVAHLSADASQCIARSP--DRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYY
        MVF    V+SVAH+SA+  Q +   P  DR++S ++L ++  +PLQQL R  L  W ++CVPPP   Y+
Subjt:  MVFNSLIVLSVAHLSADASQCIARSP--DRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATTTAACAGCTTAATCGTGTTATCGGTTGCTCATTTATCGGCCGATGCATCGCAATGCATTGCACGATCTCCCGATCGCCTCACCAGCCACCAACTTCTTTATGT
TCTCTTCAGCTACCCTCTTCAACAGCTCTCTCGCCTCGCCCTCTCTATATGGACTTTCTTATGCGTTCCTCCACCGGGTTCCTTCTACTATTACTACTACTCCTCCGACT
ACGATTCCTCATCCGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTATTTAACAGCTTAATCGTGTTATCGGTTGCTCATTTATCGGCCGATGCATCGCAATGCATTGCACGATCTCCCGATCGCCTCACCAGCCACCAACTTCTTTATGT
TCTCTTCAGCTACCCTCTTCAACAGCTCTCTCGCCTCGCCCTCTCTATATGGACTTTCTTATGCGTTCCTCCACCGGGTTCCTTCTACTATTACTACTACTCCTCCGACT
ACGATTCCTCATCCGAATGA
Protein sequenceShow/hide protein sequence
MVFNSLIVLSVAHLSADASQCIARSPDRLTSHQLLYVLFSYPLQQLSRLALSIWTFLCVPPPGSFYYYYYSSDYDSSSE