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Carg13992 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg13992
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr02:6696751..6699250
RNA-Seq ExpressionCarg13992
SyntenyCarg13992
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035773.1 hypothetical protein SDJN02_02571, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-45100Show/hide
Query:  FLLQFVFAEKRKREGTETNPKGVVVEMGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        FLLQFVFAEKRKREGTETNPKGVVVEMGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
Subjt:  FLLQFVFAEKRKREGTETNPKGVVVEMGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE

XP_022138131.1 uncharacterized protein LOC111009377 [Momordica charantia]4.4e-2793.06Show/hide
Query:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        MGY+LRVRLASFFAGAAVASSLG Y+LQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHV  AE
Subjt:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE

XP_022922390.1 uncharacterized protein LOC111430397 [Cucurbita moschata]5.8e-2791.67Show/hide
Query:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        MGY+LRVRLASFF GAAVASSLG Y+LQRDYKIAYDSISQKMGGLHDS+ESRISALEKLNQNDGSQHVQ AE
Subjt:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE

XP_022974358.1 uncharacterized protein LOC111472986 [Cucurbita maxima]1.8e-2890.91Show/hide
Query:  GVVVEMGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        G V EMGY+LRVRLASFFAGAAVASSLG Y+LQRDYKIAYDSISQKMGGLHDS+ESRISALEKLNQNDGSQHVQ AE
Subjt:  GVVVEMGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE

XP_023551615.1 uncharacterized protein LOC111809395 [Cucurbita pepo subsp. pepo]2.0e-2793.06Show/hide
Query:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        MGY+LRVRLASFFAGAAVASSLG Y+LQRDYKIAYDSISQKMGGLHDS+ESRISALEKLNQNDGSQHVQ AE
Subjt:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE

TrEMBL top hitse value%identityAlignment
A0A0A0KJB2 Uncharacterized protein3.4e-2587.5Show/hide
Query:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        MGY+LRVR+ASFFAGAAVASSLG Y+LQRDYKIAYDSIS KMGGLHDSL SRISALEKLN+ND SQHVQ AE
Subjt:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE

A0A1S3AUK7 uncharacterized protein LOC1034830084.0e-2688.89Show/hide
Query:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        MGY+LRVR+ASFFAGAAVASSLG Y+LQRDYKIAYDSIS KMGGLHDS+ SRISALEKLNQNDGSQHVQ AE
Subjt:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE

A0A6J1C8U6 uncharacterized protein LOC1110093772.1e-2793.06Show/hide
Query:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        MGY+LRVRLASFFAGAAVASSLG Y+LQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHV  AE
Subjt:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE

A0A6J1E8L7 uncharacterized protein LOC1114303972.8e-2791.67Show/hide
Query:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        MGY+LRVRLASFF GAAVASSLG Y+LQRDYKIAYDSISQKMGGLHDS+ESRISALEKLNQNDGSQHVQ AE
Subjt:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE

A0A6J1IFZ7 uncharacterized protein LOC1114729868.7e-2990.91Show/hide
Query:  GVVVEMGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        G V EMGY+LRVRLASFFAGAAVASSLG Y+LQRDYKIAYDSISQKMGGLHDS+ESRISALEKLNQNDGSQHVQ AE
Subjt:  GVVVEMGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G53650.1 unknown protein3.7e-1656.94Show/hide
Query:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE
        MGY+ RVRLASFFAGAA AS +G  VL +DYK+A++SISQ+    HDSL+ RIS LE L Q++  Q  +  E
Subjt:  MGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTCTTTTACAATTCGTGTTTGCAGAGAAAAGAAAACGGGAGGGAACAGAAACGAACCCGAAGGGCGTGGTGGTAGAGATGGGTTACATCCTGCGAGTGAGATTGGCTTC
CTTCTTCGCCGGAGCAGCGGTTGCATCGTCTCTGGGGTTTTACGTTCTTCAAAGAGATTACAAGATTGCTTACGACTCCATTTCGCAAAAGATGGGAGGGCTGCATGATT
CTCTGGAGAGTAGAATTTCAGCACTGGAAAAACTGAACCAGAATGACGGTTCCCAACATGTTCAAAGAGCGGAATAG
mRNA sequenceShow/hide mRNA sequence
TTTCTTTTACAATTCGTGTTTGCAGAGAAAAGAAAACGGGAGGGAACAGAAACGAACCCGAAGGGCGTGGTGGTAGAGATGGGTTACATCCTGCGAGTGAGATTGGCTTC
CTTCTTCGCCGGAGCAGCGGTTGCATCGTCTCTGGGGTTTTACGTTCTTCAAAGAGATTACAAGATTGCTTACGACTCCATTTCGCAAAAGATGGGAGGGCTGCATGATT
CTCTGGAGAGTAGAATTTCAGCACTGGAAAAACTGAACCAGAATGACGGTTCCCAACATGTTCAAAGAGCGGAATAGACACACACTGGAGGGGCCAAGCCAGGATAGTCT
GAAGGAAACATAAAGAACTTATGAACAATAATAATAAACTGGTCTGCTTTGTCTGCTCATCAAAAAAGATGTTTTAAGTTTTGGTTGCAAGATTTGTTTATTTCCTGTAT
GATCTTTGTTTGTTGGTATCAGATTTAGGCTTGTTCCATGCTGGTAGCTATGTTGCTGTGATGTTAACCCTGCTCGTGTAAGACTTGGGTATGAGTTTGATGAGAAATCA
TTATATCAGATTTCTAAATATACATATTTTTTCA
Protein sequenceShow/hide protein sequence
FLLQFVFAEKRKREGTETNPKGVVVEMGYILRVRLASFFAGAAVASSLGFYVLQRDYKIAYDSISQKMGGLHDSLESRISALEKLNQNDGSQHVQRAE