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Carg14006 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14006
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPentatricopeptide repeat-containing protein mitochondrial
Genome locationCarg_Chr02:6624108..6624635
RNA-Seq ExpressionCarg14006
SyntenyCarg14006
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605795.1 hypothetical protein SDJN03_03112, partial [Cucurbita argyrosperma subsp. sororia]5.0e-48100Show/hide
Query:  PSKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        PSKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  PSKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
KAG7016815.1 hypothetical protein SDJN02_21926, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-4292.86Show/hide
Query:  SKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        SKAG N+SAIAMENQS+ CLSYEKLNGVATW+GTSVASAFFASLE CSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS+IRSFEPLPPPVNDVANLPV
Subjt:  SKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
KAG7035759.1 hypothetical protein SDJN02_02557, partial [Cucurbita argyrosperma subsp. argyrosperma]3.3e-52100Show/hide
Query:  MKRRKGKIPSKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVN
        MKRRKGKIPSKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVN
Subjt:  MKRRKGKIPSKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVN

Query:  DVANLPV
        DVANLPV
Subjt:  DVANLPV
XP_022958087.1 uncharacterized protein LOC111459420 [Cucurbita moschata]2.0e-41100Show/hide
Query:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
XP_022995453.1 uncharacterized protein LOC111490985 [Cucurbita maxima]2.9e-4098.85Show/hide
Query:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHED DEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
TrEMBL top hitse value%identityAlignment
A0A0A0KLU3 Uncharacterized protein2.3e-3894.25Show/hide
Query:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQS+ CLSYEKLNG+ATW+GTSVASAFFASLERCSCINLSTSDDHEDP+EAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
A0A1S3AU63 uncharacterized protein LOC1034829844.5e-3985.85Show/hide
Query:  KIPSKAG----YNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS-VIRSFEPLPPPVND
        KI SKAG      KS I MENQS+ CLSYEKLNG+ATW+GTSVASAFFASLERCSCINLSTSDDHEDP+EAHDRPLMYCTSTSSS VIRSFEPLPPPVND
Subjt:  KIPSKAG----YNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSS-VIRSFEPLPPPVND

Query:  VANLPV
        VANLPV
Subjt:  VANLPV
A0A6J1E5Z9 uncharacterized protein LOC1114302721.7e-3895.4Show/hide
Query:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQS+ CLSYEKLNGVATW+GTSVASAFFASLE CSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
A0A6J1H0Y4 uncharacterized protein LOC1114594209.8e-42100Show/hide
Query:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
A0A6J1K418 uncharacterized protein LOC1114909851.4e-4098.85Show/hide
Query:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
        MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHED DEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
Subjt:  MENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G10810.1 unknown protein1.1e-1353.62Show/hide
Query:  SKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPL
        + +  N +A    N S+A  S EKL+  A+W+ T+V SAFFASLERCSC+NLSTSDD ++ +E+H+RPL
Subjt:  SKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPL
AT4G24026.1 unknown protein1.8e-1150.79Show/hide
Query:  AIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTS--DDHEDPDEAHDRPL
        +I++ +  S   S EK++  A+W+  +V SAFF SLERC+C+NLSTS  DD +D DE+H RPL
Subjt:  AIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTS--DDHEDPDEAHDRPL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACGAAGAAAGGGAAAAATACCATCCAAGGCAGGTTACAACAAATCCGCCATAGCCATGGAGAATCAGAGCAGCGCCTGTCTGTCCTACGAGAAGCTTAACGGCGT
CGCCACCTGGCTCGGCACCAGCGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGCGCTGTTCCTGCATCAATCTCTCAACCTCCGACGACCATGAAGATCCCGATGAGGCTC
ACGATCGCCCTCTCATGTACTGCACTTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCGCTTCCTCCGCCGGTCAATGACGTTGCCAATCTCCCCGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACGAAGAAAGGGAAAAATACCATCCAAGGCAGGTTACAACAAATCCGCCATAGCCATGGAGAATCAGAGCAGCGCCTGTCTGTCCTACGAGAAGCTTAACGGCGT
CGCCACCTGGCTCGGCACCAGCGTCGCCTCCGCCTTCTTCGCCTCTCTCGAGCGCTGTTCCTGCATCAATCTCTCAACCTCCGACGACCATGAAGATCCCGATGAGGCTC
ACGATCGCCCTCTCATGTACTGCACTTCCACTTCTTCCTCCGTCATTCGCAGCTTCGAACCGCTTCCTCCGCCGGTCAATGACGTTGCCAATCTCCCCGTCTGA
Protein sequenceShow/hide protein sequence
MKRRKGKIPSKAGYNKSAIAMENQSSACLSYEKLNGVATWLGTSVASAFFASLERCSCINLSTSDDHEDPDEAHDRPLMYCTSTSSSVIRSFEPLPPPVNDVANLPV