; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14020 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14020
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSuccinate dehydrogenase assembly factor 4, mitochondrial
Genome locationCarg_Chr02:6526900..6527232
RNA-Seq ExpressionCarg14020
SyntenyCarg14020
Gene Ontology termsGO:0008652 - cellular amino acid biosynthetic process (biological process)
GO:0009064 - glutamine family amino acid metabolic process (biological process)
GO:0034553 - mitochondrial respiratory chain complex II assembly (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0016638 - oxidoreductase activity, acting on the CH-NH2 group of donors (molecular function)
GO:0043167 - ion binding (molecular function)
InterPro domainsIPR012875 - Succinate dehydrogenase assembly factor 4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605777.1 Succinate dehydrogenase assembly factor 4, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.9e-51100Show/hide
Query:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
        MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
Subjt:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD

Query:  WERNGRCYDF
        WERNGRCYDF
Subjt:  WERNGRCYDF

KGN49871.1 hypothetical protein Csa_000062 [Cucumis sativus]2.7e-3372.97Show/hide
Query:  MSSNLTRLF-SPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYG
        MSSNL+RLF SPP+L+AL AV+R T  S+SR VSSS+NQQPSRLE+GV  +EQREAGKGS P++HEAAGDDR  +DEG D  K T E+GGPKGPEPTRYG
Subjt:  MSSNLTRLF-SPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYG

Query:  DWERNGRCYDF
        DWER GRC DF
Subjt:  DWERNGRCYDF

XP_022957978.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita moschata]8.4e-5199.09Show/hide
Query:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
        MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPG+EQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
Subjt:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD

Query:  WERNGRCYDF
        WERNGRCYDF
Subjt:  WERNGRCYDF

XP_022995844.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita maxima]9.3e-5097.27Show/hide
Query:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
        MSSNLTRLFSPPSLTALSAVNR TS SVSRLVSSSANQQPSRLEQGVPG+EQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
Subjt:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD

Query:  WERNGRCYDF
        WERNGRCYDF
Subjt:  WERNGRCYDF

XP_023532848.1 succinate dehydrogenase assembly factor 4, mitochondrial [Cucurbita pepo subsp. pepo]1.9e-5098.18Show/hide
Query:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
        MSSNLTRLFSPPSLT+LSAVNRATSISVSRLVSSSANQQPSRLEQGVPG+EQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
Subjt:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD

Query:  WERNGRCYDF
        WERNGRCYDF
Subjt:  WERNGRCYDF

TrEMBL top hitse value%identityAlignment
A0A0A0KQ66 Succinate dehydrogenase assembly factor 4, mitochondrial1.3e-3372.97Show/hide
Query:  MSSNLTRLF-SPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYG
        MSSNL+RLF SPP+L+AL AV+R T  S+SR VSSS+NQQPSRLE+GV  +EQREAGKGS P++HEAAGDDR  +DEG D  K T E+GGPKGPEPTRYG
Subjt:  MSSNLTRLF-SPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYG

Query:  DWERNGRCYDF
        DWER GRC DF
Subjt:  DWERNGRCYDF

A0A5A7TMD3 Succinate dehydrogenase assembly factor 4, mitochondrial1.1e-3272.07Show/hide
Query:  MSSNLTRLF-SPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYG
        MSS+L+RLF SPP+L+AL  V R TS S+SR VSSS+NQQPSR EQGV  +EQREA KGS P+QHEAAGDDR S+D+G D  K   E+GGPKG EPTRYG
Subjt:  MSSNLTRLF-SPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYG

Query:  DWERNGRCYDF
        DWERNGRCYDF
Subjt:  DWERNGRCYDF

A0A6A3BZE2 Succinate dehydrogenase assembly factor 4, mitochondrial1.0e-1452.94Show/hide
Query:  SNLTRLFS--------PPSLTAL--SAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQ-REAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPK
        ++L+RLFS         PS T     +V R+ S S +R V SSA Q  S+L  G   DE+ REA K +L  +++  G+D    DEG  VNK TGEVGGPK
Subjt:  SNLTRLFS--------PPSLTAL--SAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQ-REAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPK

Query:  GPEPTRYGDWERNGRCYDF
        GPEPTRYGDWERNGRCYDF
Subjt:  GPEPTRYGDWERNGRCYDF

A0A6J1H1T7 Succinate dehydrogenase assembly factor 4, mitochondrial4.1e-5199.09Show/hide
Query:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
        MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPG+EQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
Subjt:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD

Query:  WERNGRCYDF
        WERNGRCYDF
Subjt:  WERNGRCYDF

A0A6J1K722 Succinate dehydrogenase assembly factor 4, mitochondrial4.5e-5097.27Show/hide
Query:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
        MSSNLTRLFSPPSLTALSAVNR TS SVSRLVSSSANQQPSRLEQGVPG+EQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD
Subjt:  MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGD

Query:  WERNGRCYDF
        WERNGRCYDF
Subjt:  WERNGRCYDF

SwissProt top hitse value%identityAlignment
Q54Y25 Succinate dehydrogenase assembly factor 4, mitochondrial1.3e-0659.52Show/hide
Query:  DDRDSEDEGADVNKATGEVGGPKGPEPTRYGDWERNGRCYDF
        ++ D ++    VN  T E+GGPKGPEPTRY DWERNGR  DF
Subjt:  DDRDSEDEGADVNKATGEVGGPKGPEPTRYGDWERNGRCYDF

Q5VUM1 Succinate dehydrogenase assembly factor 4, mitochondrial1.0e-0639.82Show/hide
Query:  SNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGA-----DVNKATGEVGGPKGPEPTR
        S L  L S  S TA  A          R  SSS   +   ++Q +         K  LP+    A +D   E E       DVN  T E GGP+GPEPTR
Subjt:  SNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGA-----DVNKATGEVGGPKGPEPTR

Query:  YGDWERNGRCYDF
        YGDWER GRC DF
Subjt:  YGDWERNGRCYDF

Q8BTE0 Succinate dehydrogenase assembly factor 4, mitochondrial5.4e-0841.18Show/hide
Query:  ATSISVSRLVSSSANQQPSRL---------EQGVPGDEQREAGKGSLP----DQHEAAGDDRDS-EDEGADVNKATGEVGGPKGPEPTRYGDWERNGRCY
        +T++SVSR+       +PS L         ++G P   ++   K  LP    D  E + ++R+  +    DVN  T E GGPKGPEPTRYGDWER GRC 
Subjt:  ATSISVSRLVSSSANQQPSRL---------EQGVPGDEQREAGKGSLP----DQHEAAGDDRDS-EDEGADVNKATGEVGGPKGPEPTRYGDWERNGRCY

Query:  DF
        DF
Subjt:  DF

Q9VLU6 Succinate dehydrogenase assembly factor 4, mitochondrial4.5e-0776.67Show/hide
Query:  NKATGEVGGPKGPEPTRYGDWERNGRCYDF
        N  TGE+GGP GPEPTRYGDWER GR  DF
Subjt:  NKATGEVGGPKGPEPTRYGDWERNGRCYDF

Arabidopsis top hitse value%identityAlignment
AT5G67490.1 unknown protein3.8e-0942.42Show/hide
Query:  ISVSRLVSSSANQQPSR-LEQGVPGDEQ-----REAGKGSLPDQHEAAGDDRDSEDE--------GADVNKATGEVGGPKGPEPTRYGDWERNGRCYDF
        I+ SR VSS   +  SR L  G P   Q     ++  +   PDQ+         E+E        G  VN+ TGE+GGP+GPEPTRYGDWE+ GRC DF
Subjt:  ISVSRLVSSSANQQPSR-LEQGVPGDEQ-----REAGKGSLPDQHEAAGDDRDSEDE--------GADVNKATGEVGGPKGPEPTRYGDWERNGRCYDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCAATCTCACCCGTCTATTCTCGCCGCCTAGTCTCACCGCTCTATCGGCGGTGAATCGCGCCACTTCCATTTCGGTGAGTCGACTCGTCTCCTCCTCGGCGAA
TCAGCAACCTTCTCGATTGGAGCAAGGTGTTCCCGGCGATGAGCAACGAGAAGCCGGAAAAGGAAGTTTGCCGGATCAACACGAGGCTGCCGGTGATGATCGAGATAGTG
AAGATGAGGGAGCTGATGTGAACAAAGCGACCGGCGAGGTCGGTGGACCTAAAGGTCCCGAGCCAACTCGCTATGGCGATTGGGAAAGAAACGGTCGGTGCTACGATTTT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAGCAATCTCACCCGTCTATTCTCGCCGCCTAGTCTCACCGCTCTATCGGCGGTGAATCGCGCCACTTCCATTTCGGTGAGTCGACTCGTCTCCTCCTCGGCGAA
TCAGCAACCTTCTCGATTGGAGCAAGGTGTTCCCGGCGATGAGCAACGAGAAGCCGGAAAAGGAAGTTTGCCGGATCAACACGAGGCTGCCGGTGATGATCGAGATAGTG
AAGATGAGGGAGCTGATGTGAACAAAGCGACCGGCGAGGTCGGTGGACCTAAAGGTCCCGAGCCAACTCGCTATGGCGATTGGGAAAGAAACGGTCGGTGCTACGATTTT
TGA
Protein sequenceShow/hide protein sequence
MSSNLTRLFSPPSLTALSAVNRATSISVSRLVSSSANQQPSRLEQGVPGDEQREAGKGSLPDQHEAAGDDRDSEDEGADVNKATGEVGGPKGPEPTRYGDWERNGRCYDF