; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14022 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14022
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncyclic nucleotide gated channel 1
Genome locationCarg_Chr02:6515664..6517198
RNA-Seq ExpressionCarg14022
SyntenyCarg14022
Gene Ontology termsGO:0034220 - ion transmembrane transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0005216 - ion channel activity (molecular function)
InterPro domainsIPR018490 - Cyclic nucleotide-binding-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042557.1 cyclic nucleotide-gated ion channel 1 [Cucumis melo var. makuwa]1.5e-3597.62Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI
        MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR  I
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI

KAG6605775.1 Cyclic nucleotide-gated ion channel 1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-3597.62Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI
        MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR  I
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI

KAG7035743.1 Cyclic nucleotide-gated ion channel 1, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-59100Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKISTSGQLGRIQAMVIAS
        MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKISTSGQLGRIQAMVIAS
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKISTSGQLGRIQAMVIAS

Query:  TISSSGTLVPIYRSRADEFVELDL
        TISSSGTLVPIYRSRADEFVELDL
Subjt:  TISSSGTLVPIYRSRADEFVELDL

XP_004145926.1 cyclic nucleotide-gated ion channel 1 [Cucumis sativus]1.5e-3597.62Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI
        MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR  I
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI

XP_022957970.1 cyclic nucleotide-gated ion channel 1 isoform X1 [Cucurbita moschata]1.5e-3597.62Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI
        MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR  I
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI

TrEMBL top hitse value%identityAlignment
A0A0A0KJV8 Cyclic nucleotide-binding domain-containing protein7.1e-3697.62Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI
        MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR  I
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI

A0A1S3AUY6 cyclic nucleotide-gated ion channel 17.1e-3697.62Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI
        MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR  I
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI

A0A5A7TLG5 Cyclic nucleotide-gated ion channel 17.1e-3697.62Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI
        MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR  I
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI

A0A6J1DUZ7 cyclic nucleotide-gated ion channel 17.1e-3697.62Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI
        MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR  I
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI

A0A6J1K511 cyclic nucleotide-gated ion channel 17.1e-3697.62Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI
        MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR  I
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKI

SwissProt top hitse value%identityAlignment
O65717 Cyclic nucleotide-gated ion channel 19.0e-3692.59Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR
        MQTYLQSTTTRLEEMRV+RRDAEQWMSHRLLPE+LR+RIRRYEQYKWQETRGVDEENL+ NLPKDLRRDIKRHLCL+LLMR
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR

O82226 Probable cyclic nucleotide-gated ion channel 63.9e-3181.48Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR
        MQTYLQS T RLEEMRV+RRD+EQWM HR+LP  LRER+RRY+QYKW ETRGVDEENLV+NLPKDLRRDIKRHLCL+L+ R
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR

Q9LD40 Putative cyclic nucleotide-gated ion channel 133.0e-3181.48Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR
        MQ YL+STT R EEMRVR+RDAEQWMSHR+LP+ LR+RIRRYEQYKWQETRGV+EENL+RNLPKDLRRDIKRH CL LL +
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR

Q9LNJ0 Probable cyclic nucleotide-gated ion channel 105.1e-3181.48Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR
        MQ YL+STT R EEMRVR+RDAEQWMSHR+LPE LR+RIRRYEQY+WQETRGV+EE L+RNLPKDLRRDIKRHLCL LL +
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR

Q9M0A4 Putative cyclic nucleotide-gated ion channel 93.9e-3181.48Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR
        MQTYLQS T RLEEMRV+RRD+EQWM HR+LP  LRER+RRY+QYKW ETRGVDEENLV+NLPKDLRRDIKRHLCL+L+ R
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR

Arabidopsis top hitse value%identityAlignment
AT2G23980.1 cyclic nucleotide-gated channel 62.8e-3281.48Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR
        MQTYLQS T RLEEMRV+RRD+EQWM HR+LP  LRER+RRY+QYKW ETRGVDEENLV+NLPKDLRRDIKRHLCL+L+ R
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR

AT4G01010.1 cyclic nucleotide-gated channel 132.1e-3281.48Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR
        MQ YL+STT R EEMRVR+RDAEQWMSHR+LP+ LR+RIRRYEQYKWQETRGV+EENL+RNLPKDLRRDIKRH CL LL +
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR

AT4G30560.1 cyclic nucleotide gated channel 92.8e-3281.48Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR
        MQTYLQS T RLEEMRV+RRD+EQWM HR+LP  LRER+RRY+QYKW ETRGVDEENLV+NLPKDLRRDIKRHLCL+L+ R
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR

AT4G30560.2 cyclic nucleotide gated channel 92.8e-3281.48Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR
        MQTYLQS T RLEEMRV+RRD+EQWM HR+LP  LRER+RRY+QYKW ETRGVDEENLV+NLPKDLRRDIKRHLCL+L+ R
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR

AT5G53130.1 cyclic nucleotide gated channel 16.4e-3792.59Show/hide
Query:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR
        MQTYLQSTTTRLEEMRV+RRDAEQWMSHRLLPE+LR+RIRRYEQYKWQETRGVDEENL+ NLPKDLRRDIKRHLCL+LLMR
Subjt:  MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGACATATTTGCAATCCACCACTACAAGATTGGAAGAAATGAGAGTTAGAAGGAGAGATGCAGAACAATGGATGTCCCACCGTTTACTCCCTGAGAGCCTCCGGGA
GCGAATCAGGAGGTACGAACAGTACAAGTGGCAGGAAACTAGAGGGGTTGATGAAGAGAATCTGGTTCGAAATCTTCCGAAAGATCTCAGAAGGGACATAAAGCGCCATC
TCTGCTTGTCTCTGCTAATGAGGCAAAAGATTTCAACCTCAGGTCAGTTGGGCAGAATCCAAGCAATGGTCATTGCCTCAACTATAAGTTCATCTGGAACCCTCGTGCCT
ATCTATCGATCTCGTGCAGATGAGTTCGTCGAACTGGATTTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGACATATTTGCAATCCACCACTACAAGATTGGAAGAAATGAGAGTTAGAAGGAGAGATGCAGAACAATGGATGTCCCACCGTTTACTCCCTGAGAGCCTCCGGGA
GCGAATCAGGAGGTACGAACAGTACAAGTGGCAGGAAACTAGAGGGGTTGATGAAGAGAATCTGGTTCGAAATCTTCCGAAAGATCTCAGAAGGGACATAAAGCGCCATC
TCTGCTTGTCTCTGCTAATGAGGCAAAAGATTTCAACCTCAGGTCAGTTGGGCAGAATCCAAGCAATGGTCATTGCCTCAACTATAAGTTCATCTGGAACCCTCGTGCCT
ATCTATCGATCTCGTGCAGATGAGTTCGTCGAACTGGATTTGTGA
Protein sequenceShow/hide protein sequence
MQTYLQSTTTRLEEMRVRRRDAEQWMSHRLLPESLRERIRRYEQYKWQETRGVDEENLVRNLPKDLRRDIKRHLCLSLLMRQKISTSGQLGRIQAMVIASTISSSGTLVP
IYRSRADEFVELDL