; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14055 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14055
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor IBH1-like 1
Genome locationCarg_Chr02:6303026..6303553
RNA-Seq ExpressionCarg14055
SyntenyCarg14055
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR044660 - Transcription factor IBH1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587785.1 Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. sororia]4.9e-69100Show/hide
Query:  MTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAKKLVRKRRK
        MTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAKKLVRKRRK
Subjt:  MTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKCKKPAAELIAKKLVRKRRK

Query:  VLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
        VLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
Subjt:  VLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS

KAG7035712.1 Transcription factor IBH1-like 1, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-86100Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS
        MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS

Query:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
        RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
Subjt:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS

XP_022933891.1 transcription factor IBH1-like 1 isoform X2 [Cucurbita moschata]3.2e-8498.86Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS
        MRNPS LKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRT NPKITRIMWSSGKIVKRS
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS

Query:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
        RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
Subjt:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS

XP_022968867.1 transcription factor IBH1-like 1 [Cucurbita maxima]8.6e-8296.57Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS
        MRNPS LKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRT NPKITRIMWSS KIVKRS
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS

Query:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
        RRVQRMRRKCKKPAAELIAK L RKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYI SSS
Subjt:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS

XP_023532012.1 transcription factor IBH1-like 1 [Cucurbita pepo subsp. pepo]3.9e-8296.57Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS
        MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSAD+ALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRT NPKI+RIMWSSGKIVKRS
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS

Query:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
        RRVQRMRRK KKPAAELIA+KLVR+RRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
Subjt:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS

TrEMBL top hitse value%identityAlignment
A0A1S3B8V1 uncharacterized protein LOC1034873051.0e-5672.28Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGR--------TNNPKITRIMWS
        M+NP+SLK+EFLKKWMMGL+IYTT+N+NMTV +RK AIKLSADIALASSRNCATRWS+A+IA +SVD+ S LVA+ +LGR         +N KITR  WS
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGR--------TNNPKITRIMWS

Query:  SGKIVKRSRRV-QRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
        SGKIVKRSRRV +R RR+ K  AA  IA++LV++R KVLRGLVPGGEFMDEISLIEETLDY+SALQAQVDVMR LA+AY  SSS
Subjt:  SGKIVKRSRRV-QRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS

A0A6J1E715 transcription factor IBH1-like 16.5e-5973.22Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRT-------NNPKITRIMWSS
        MRNPS LKR+FLKKW MGL+IYTT+N+NMTV  RK AIKLSADIALASSRNCATRWS+A+IA TSV DGS LVA+ +LGR        ++ KITR  WSS
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRT-------NNPKITRIMWSS

Query:  GKIVKRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLA-TAYIASSS
         KI+KRSRRV R R+KC+KPAAE IAK+LV+KR + LRGLVPGGEFMDE+SLIEETLDYI ALQ QVDVMRCLA TAY+A  S
Subjt:  GKIVKRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLA-TAYIASSS

A0A6J1F0A2 transcription factor IBH1-like 1 isoform X21.5e-8498.86Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS
        MRNPS LKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRT NPKITRIMWSSGKIVKRS
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS

Query:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
        RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
Subjt:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS

A0A6J1HUQ3 transcription factor IBH1-like 14.2e-8296.57Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS
        MRNPS LKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRT NPKITRIMWSS KIVKRS
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRS

Query:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS
        RRVQRMRRKCKKPAAELIAK L RKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYI SSS
Subjt:  RRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS

A0A6J1JMR3 transcription factor IBH1-like 15.3e-6174.32Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRT-------NNPKITRIMWSS
        MRNPSSLKR+FLKKW+MGL+IYTT+N+NMTV  RK AIKLSADIALASSRNCATRWS+A+IA TSV DGS LVA+ LLGR        ++ KITR  WSS
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRT-------NNPKITRIMWSS

Query:  GKIVKRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLA-TAYIASSS
        GKI+KRSRRV R R+KC+KPAAE IA++LV+KR + LRGLVPGGEFMDE+SLIEETLDYI ALQ QVDVMRCLA TAY+A  S
Subjt:  GKIVKRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLA-TAYIASSS

SwissProt top hitse value%identityAlignment
Q9M0B9 Transcription factor IBH1-like 13.7e-2743.35Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDG---SRLVADVLLGRTNNPKITRIMWSSGKIV
        M+  SS+  EFLKKW MGL+I+  S  N +V +RK AIKLSAD+A+AS R   T WS+ALI  T+ +D     ++++ +      N K+ +      KIV
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDG---SRLVADVLLGRTNNPKITRIMWSSGKIV

Query:  KRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRCLATA
        +RS+++ R + K     A   AK+LV++R + LR +VPGGE M +++ L++ETLDYI +LQ QV+VMR +  A
Subjt:  KRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRCLATA

Arabidopsis top hitse value%identityAlignment
AT4G30410.1 sequence-specific DNA binding transcription factors2.6e-2843.35Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDG---SRLVADVLLGRTNNPKITRIMWSSGKIV
        M+  SS+  EFLKKW MGL+I+  S  N +V +RK AIKLSAD+A+AS R   T WS+ALI  T+ +D     ++++ +      N K+ +      KIV
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDG---SRLVADVLLGRTNNPKITRIMWSSGKIV

Query:  KRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRCLATA
        +RS+++ R + K     A   AK+LV++R + LR +VPGGE M +++ L++ETLDYI +LQ QV+VMR +  A
Subjt:  KRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRCLATA

AT4G30410.2 sequence-specific DNA binding transcription factors2.6e-2843.35Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDG---SRLVADVLLGRTNNPKITRIMWSSGKIV
        M+  SS+  EFLKKW MGL+I+  S  N +V +RK AIKLSAD+A+AS R   T WS+ALI  T+ +D     ++++ +      N K+ +      KIV
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDG---SRLVADVLLGRTNNPKITRIMWSSGKIV

Query:  KRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRCLATA
        +RS+++ R + K     A   AK+LV++R + LR +VPGGE M +++ L++ETLDYI +LQ QV+VMR +  A
Subjt:  KRSRRVQRMRRKCKKPAAELIAKKLVRKRRKVLRGLVPGGEFM-DEISLIEETLDYISALQAQVDVMRCLATA

AT5G57780.1 EXPRESSED IN: 18 plant structures3.4e-2040.35Show/hide
Query:  MRNPSSLKREFLKKWMMGLEIYTTSNKN-MTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKR
        M   + +K+EF+KKW+  L +  +S ++ + VT+RKNAI+LS+D+A+A++RN +T WS+ALI+ +               +T N  + R      +I+K+
Subjt:  MRNPSSLKREFLKKWMMGLEIYTTSNKN-MTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKR

Query:  SRRVQRMRRKCK--KPAAELIAKKLVRKRRKVLRGLVPGGEFMDEIS-LIEETLDYISALQAQVDVMRCLA
        +R   RM+ +C   +      AK  VRKR  +L+ LVPGGE +D+   LI ETLDYI  L+AQVDVMR +A
Subjt:  SRRVQRMRRKCK--KPAAELIAKKLVRKRRKVLRGLVPGGEFMDEIS-LIEETLDYISALQAQVDVMRCLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAAATCCCAGTTCTTTAAAACGAGAATTCTTGAAGAAATGGATGATGGGTCTTGAAATATACACAACCTCCAACAAAAACATGACGGTCACCCAGAGAAAAAACGC
CATAAAATTATCCGCAGATATAGCCTTGGCCTCCTCCAGAAACTGCGCCACTCGGTGGAGTCAAGCGCTCATCGCCGCCACCTCCGTTGACGACGGAAGCCGCCTCGTGG
CCGATGTCCTTCTGGGCCGGACTAATAACCCCAAAATTACGCGAATTATGTGGAGTAGTGGGAAGATTGTCAAAAGAAGCCGCCGCGTGCAGCGGATGAGAAGAAAATGC
AAGAAGCCGGCGGCGGAGTTGATTGCGAAGAAGTTGGTGCGGAAAAGAAGGAAAGTTCTTCGGGGATTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCATTGATAGA
AGAAACCCTTGACTACATATCCGCGCTTCAAGCTCAAGTGGATGTAATGCGATGCCTTGCAACTGCATACATAGCATCATCATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCGAAATCCCAGTTCTTTAAAACGAGAATTCTTGAAGAAATGGATGATGGGTCTTGAAATATACACAACCTCCAACAAAAACATGACGGTCACCCAGAGAAAAAACGC
CATAAAATTATCCGCAGATATAGCCTTGGCCTCCTCCAGAAACTGCGCCACTCGGTGGAGTCAAGCGCTCATCGCCGCCACCTCCGTTGACGACGGAAGCCGCCTCGTGG
CCGATGTCCTTCTGGGCCGGACTAATAACCCCAAAATTACGCGAATTATGTGGAGTAGTGGGAAGATTGTCAAAAGAAGCCGCCGCGTGCAGCGGATGAGAAGAAAATGC
AAGAAGCCGGCGGCGGAGTTGATTGCGAAGAAGTTGGTGCGGAAAAGAAGGAAAGTTCTTCGGGGATTGGTTCCGGGAGGTGAATTTATGGATGAAATTTCATTGATAGA
AGAAACCCTTGACTACATATCCGCGCTTCAAGCTCAAGTGGATGTAATGCGATGCCTTGCAACTGCATACATAGCATCATCATCATGA
Protein sequenceShow/hide protein sequence
MRNPSSLKREFLKKWMMGLEIYTTSNKNMTVTQRKNAIKLSADIALASSRNCATRWSQALIAATSVDDGSRLVADVLLGRTNNPKITRIMWSSGKIVKRSRRVQRMRRKC
KKPAAELIAKKLVRKRRKVLRGLVPGGEFMDEISLIEETLDYISALQAQVDVMRCLATAYIASSS