; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14072 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14072
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description50S ribosomal protein L35
Genome locationCarg_Chr02:6239558..6242031
RNA-Seq ExpressionCarg14072
SyntenyCarg14072
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001706 - Ribosomal protein L35, non-mitochondrial
IPR018265 - Ribosomal protein L35, conserved site
IPR021137 - Ribosomal protein L35
IPR037229 - Ribosomal protein L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022135558.1 50S ribosomal protein L35, chloroplastic isoform X1 [Momordica charantia]1.4e-5986.84Show/hide
Query:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLA-SFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRG
        MASAST   FGLRF+PLCSRPS  VS  S+RLA SFNK NSLRL SS NISG GVALLQKS  IAP  QV TPLTVVAAKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLA-SFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
        KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ

XP_022933399.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita moschata]2.2e-73100Show/hide
Query:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ

XP_023004823.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita maxima]3.6e-6896.55Show/hide
Query:  AAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRA
        A+VFGLRFTPLCSRPSFHVS +SIRLASFNK NSLRLSSSHNISGVGVALLQKSCQI+PRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRA
Subjt:  AAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRA

Query:  GKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
        GKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  GKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ

XP_023516182.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita pepo subsp. pepo]1.2e-5884.11Show/hide
Query:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASAS  A FGLRF+PLCSR S  VS SS+RL S NKA SLRLSSSHNIS  GVAL+QK C IAP  ++ TP TVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ

XP_023531155.1 50S ribosomal protein L35, chloroplastic-like [Cucurbita pepo subsp. pepo]4.5e-7197.35Show/hide
Query:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK
        MAS S A VFGLRFTPLCSRPSFHVS SSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ

TrEMBL top hitse value%identityAlignment
A0A1S3B9R8 50S ribosomal protein L353.6e-5881.46Show/hide
Query:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASAS A  FGLRF+PLCSRPSF VS +S+ LASFNK NSL+LSSSHNISG G+  LQK   I+P  Q+ TP TV AAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKN KR+LRLSK+HPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ

A0A6J1C550 50S ribosomal protein L356.6e-6086.84Show/hide
Query:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLA-SFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRG
        MASAST   FGLRF+PLCSRPS  VS  S+RLA SFNK NSLRL SS NISG GVALLQKS  IAP  QV TPLTVVAAKGYKMKTHKASAKRFRVTGRG
Subjt:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLA-SFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRG

Query:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
        KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  KIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ

A0A6J1E327 50S ribosomal protein L352.3e-5784.11Show/hide
Query:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASAS  A FGLRF PLCSR S  VS SS+RL S NKA SLRLSSSHNIS  GVALLQK   IAP  ++ TP TVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA+
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ

A0A6J1EZN8 50S ribosomal protein L351.0e-73100Show/hide
Query:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK
        MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK
Subjt:  MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGK

Query:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
        IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  IVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ

A0A6J1L0M4 50S ribosomal protein L351.7e-6896.55Show/hide
Query:  AAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRA
        A+VFGLRFTPLCSRPSFHVS +SIRLASFNK NSLRLSSSHNISGVGVALLQKSCQI+PRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRA
Subjt:  AAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRA

Query:  GKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
        GKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ
Subjt:  GKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ

SwissProt top hitse value%identityAlignment
B2J0D1 50S ribosomal protein L355.1e-0957.14Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+AGK HLL  K++ +K  +SK   V   D  NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

P23326 50S ribosomal protein L35, chloroplastic1.1e-3060.13Show/hide
Query:  MASASTAAVFGLRFTPL-CSRPSFHVSLS-SIRLASFNK--ANSLRLSSSHNISGVGV-ALLQKSCQIAP-RPQVST---PLTVVAAKGYKMKTHKASAK
        MA AS  A    +   L  S PS   S +  I L  FNK   ++L LSSS +IS   V  ++ K+ +I+     VST     TV AAKGYKMKTHKASAK
Subjt:  MASASTAAVFGLRFTPL-CSRPSFHVSLS-SIRLASFNK--ANSLRLSSSHNISGVGV-ALLQKSCQIAP-RPQVST---PLTVVAAKGYKMKTHKASAK

Query:  RFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQ
        RFRVTG+GKIVRRRAGKQHLL KKNTKRK RLSK+  V RSDYDNVIGALPYLKVNR+
Subjt:  RFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQ

Q3M7I2 50S ribosomal protein L354.6e-1058.73Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K T +K + SKM  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

Q8VZ55 50S ribosomal protein L35, chloroplastic6.6e-3362.5Show/hide
Query:  MASASTAAVFGLRFTPLCSRPSFHVSL-SSIRLASFNKANSLRLSSSHNISGVGVAL-LQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGR
        MAS S A+V  + F       S  VSL SS+  A+        LSSSH+ISG+   L L+ S   +P  Q     TV A KGYKMKTHKASAKRFRVTGR
Subjt:  MASASTAAVFGLRFTPLCSRPSFHVSL-SSIRLASFNKANSLRLSSSHNISGVGVAL-LQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KRKLRLSKM  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA

Q8YRL9 50S ribosomal protein L354.6e-1058.73Show/hide
Query:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL
        K+KT KA+AKRFR TG GKIVRR+A K HLL  K T +K + SKM  V+  D +NV   LPYL
Subjt:  KMKTHKASAKRFRVTGRGKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYL

Arabidopsis top hitse value%identityAlignment
AT2G24090.1 Ribosomal protein L354.7e-3462.5Show/hide
Query:  MASASTAAVFGLRFTPLCSRPSFHVSL-SSIRLASFNKANSLRLSSSHNISGVGVAL-LQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGR
        MAS S A+V  + F       S  VSL SS+  A+        LSSSH+ISG+   L L+ S   +P  Q     TV A KGYKMKTHKASAKRFRVTGR
Subjt:  MASASTAAVFGLRFTPLCSRPSFHVSL-SSIRLASFNKANSLRLSSSHNISGVGVAL-LQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGR

Query:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA
        GKIVRRR+GKQHLL KKN KRKLRLSKM  V+RSDYDNVIGALPYLKVNR+A
Subjt:  GKIVRRRAGKQHLLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCTGCTTCGACGGCGGCGGTCTTTGGTCTTAGGTTTACGCCACTGTGTTCTCGGCCATCATTTCACGTCTCTCTTAGTTCCATCCGGCTCGCTTCGTTCAATAA
GGCGAACTCGTTGAGGCTCAGTTCCTCTCACAACATTTCCGGGGTTGGAGTTGCTCTCCTTCAGAAGTCATGTCAAATCGCTCCCCGTCCTCAAGTTTCTACTCCTCTGA
CTGTTGTCGCTGCTAAAGGCTACAAAATGAAAACCCACAAGGCTTCGGCCAAGCGATTCAGGGTGACGGGTCGGGGGAAAATTGTTCGGAGGAGAGCAGGAAAGCAGCAT
TTGCTGTACAAGAAGAACACCAAGAGAAAATTACGGCTTTCCAAAATGCACCCAGTTAGCCGAAGTGACTACGATAATGTGATCGGTGCTTTGCCATACCTGAAGGTGAA
CAGGCAAGCGCAGTAG
mRNA sequenceShow/hide mRNA sequence
TTCACTTTATCCACAGCAGGCCGAGGCCAAGGCTCGTAGAGATTGGCAGAAAGAAGAAGAAAGACCAGAGGGTTCGAAGCTTCAGTGATGGCATCTGCTTCGACGGCGGC
GGTCTTTGGTCTTAGGTTTACGCCACTGTGTTCTCGGCCATCATTTCACGTCTCTCTTAGTTCCATCCGGCTCGCTTCGTTCAATAAGGCGAACTCGTTGAGGCTCAGTT
CCTCTCACAACATTTCCGGGGTTGGAGTTGCTCTCCTTCAGAAGTCATGTCAAATCGCTCCCCGTCCTCAAGTTTCTACTCCTCTGACTGTTGTCGCTGCTAAAGGCTAC
AAAATGAAAACCCACAAGGCTTCGGCCAAGCGATTCAGGGTGACGGGTCGGGGGAAAATTGTTCGGAGGAGAGCAGGAAAGCAGCATTTGCTGTACAAGAAGAACACCAA
GAGAAAATTACGGCTTTCCAAAATGCACCCAGTTAGCCGAAGTGACTACGATAATGTGATCGGTGCTTTGCCATACCTGAAGGTGAACAGGCAAGCGCAGTAGAGGCCAT
CACCTCACCCCATTAGATCTTGGCTCTACTTAGTTCATTTGTAATTGTAACCAAATGATTTTCAATTTTCCAGAACTCCTCAAAGAGCTAAGTTTGATTGCTTTTGAATA
TTATTTCTCTAGTTTATACCATCAGTTCATAATGGTGCTTTCTTTTAATTCTCTTCCTCTCGTCTCTTTTTGCTAATCTTCTTGGGCTATAAAACCGAAGTCATCTTCTC
TGTAAATCACGATCATTTTGTCCTTGTCGAATATGTCTAACCTGTTTGATCAGTTGTATCTCAACATATAAAAATATAACTCCGTAGCTAAATGGCAATTGCACTTCTGT
TTGCTCAGGGAATTGACTTTTT
Protein sequenceShow/hide protein sequence
MASASTAAVFGLRFTPLCSRPSFHVSLSSIRLASFNKANSLRLSSSHNISGVGVALLQKSCQIAPRPQVSTPLTVVAAKGYKMKTHKASAKRFRVTGRGKIVRRRAGKQH
LLYKKNTKRKLRLSKMHPVSRSDYDNVIGALPYLKVNRQAQ