CuGenDBv2

Gene ID	Carg14095
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cytochrome c oxidase assembly factor 6
Genome location	Carg_Chr02:6113828..6114807
RNA-Seq Expression	Carg14095
Synteny	Carg14095
Gene Ontology terms	GO:0005739 - mitochondrion (cellular component) GO:0045277 - respiratory chain complex IV (cellular component)
InterPro domains	IPR003213 - Cytochrome c oxidase, subunit VIb IPR036549 - Cytochrome c oxidase, subunit VIb superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008443871.1 PREDICTED: uncharacterized protein LOC103487365 isoform X1 [Cucumis melo]

2.1e-52

88.6

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA E D SGGS+EVHTDVL+E RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPTS
        PL+LPQPYTFKPT+
Subjt:  PLVLPQPYTFKPTS

XP_022926034.1 cytochrome c oxidase assembly factor 6 [Cucurbita moschata]

2.3e-59

100

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPTS
        PLVLPQPYTFKPTS
Subjt:  PLVLPQPYTFKPTS

XP_022973432.1 cytochrome c oxidase assembly factor 6 [Cucurbita maxima]

3.3e-58

99.12

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA ETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPTS
        PLVLPQPYTFKPTS
Subjt:  PLVLPQPYTFKPTS

XP_023529846.1 cytochrome c oxidase assembly factor 6 [Cucurbita pepo subsp. pepo]

2.1e-57

98.25

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA  TDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPTS
        PLVLPQPYTFKPTS
Subjt:  PLVLPQPYTFKPTS

XP_038878579.1 uncharacterized protein LOC120070767 [Benincasa hispida]

3.5e-52

89.47

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA E D SGG +EVH+DVLAE RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA FVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPTS
        PL+LPQPYTFKPT+
Subjt:  PLVLPQPYTFKPTS

TrEMBL top hits

e value

%identity

Alignment

A0A1S3B9T5 uncharacterized protein LOC103487365 isoform X1

1.0e-52

88.6

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA E D SGGS+EVHTDVL+E RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPTS
        PL+LPQPYTFKPT+
Subjt:  PLVLPQPYTFKPTS

A0A5A7SVN2 Cytochrome c oxidase assembly factor 6 isoform X3

1.0e-52

88.6

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA E D SGGS+EVHTDVL+E RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RA++VKLCRASWVKHFDRKFCQNSRVQRLLDDKD RRG
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPTS
        PL+LPQPYTFKPT+
Subjt:  PLVLPQPYTFKPTS

A0A6J1BZF0 uncharacterized protein LOC111006886

2.9e-52

90.35

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA E D SGG +EVH+DVLA  RQACYKARDAFYACVEKESDKKPTEIASVGL+YPAECKA RAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPTS
        PL LPQPYTFKPTS
Subjt:  PLVLPQPYTFKPTS

A0A6J1EDW1 cytochrome c oxidase assembly factor 6

1.1e-59

100

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPTS
        PLVLPQPYTFKPTS
Subjt:  PLVLPQPYTFKPTS

A0A6J1I7I2 cytochrome c oxidase assembly factor 6

1.6e-58

99.12

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA ETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPTS
        PLVLPQPYTFKPTS
Subjt:  PLVLPQPYTFKPTS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G58005.1 Cytochrome c oxidase, subunit Vib family protein

1.2e-42

69.03

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA +T  S    +VH DVL + R ACYKARDAFYAC+EKES KKPTEIA+VGLLYP EC  SR +FV  CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLVLPQPYTFKPT

AT5G58005.2 Cytochrome c oxidase, subunit Vib family protein

1.2e-42

69.03

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Query:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG
        MA +T  S    +VH DVL + R ACYKARDAFYAC+EKES KKPTEIA+VGLLYP EC  SR +FV  CR+SWVKHFDR++C+N RVQRLLDD D R+G
Subjt:  MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRG

Query:  PLVLPQPYTFKPT
        P+ LPQPYTFKP+
Subjt:  PLVLPQPYTFKPT

Sequences

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CDS sequence

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ATGGCTCCCGAAACTGATCCGTCTGGAGGCTCGGAAGAAGTTCACACCGATGTTTTAGCGGAATTCAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTGT
GGAGAAGGAATCAGACAAGAAGCCCACTGAAATTGCTTCTGTTGGCCTTCTTTATCCCGCTGAGTGTAAAGCCTCCAGGGCTGAGTTTGTCAAACTTTGTAGGGCTTCTT
GGGTGAAGCATTTTGATAGGAAGTTTTGTCAGAACAGTAGGGTTCAAAGACTCTTAGATGACAAAGATTCGAGGAGAGGCCCTTTGGTACTTCCGCAGCCTTACACTTTC
AAGCCCACTAGTTGA

mRNA sequence

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GGTTGGAACGATCGAAAACCCCAACCGCGAAAGAAACCAAGCAACATAGCATAGCATCTCCGTCTCTGTTGTAGCAACTATGGCTCCCGAAACTGATCCGTCTGGAGGCT
CGGAAGAAGTTCACACCGATGTTTTAGCGGAATTCAGACAAGCTTGCTACAAGGCTCGCGATGCTTTTTATGCTTGTGTGGAGAAGGAATCAGACAAGAAGCCCACTGAA
ATTGCTTCTGTTGGCCTTCTTTATCCCGCTGAGTGTAAAGCCTCCAGGGCTGAGTTTGTCAAACTTTGTAGGGCTTCTTGGGTGAAGCATTTTGATAGGAAGTTTTGTCA
GAACAGTAGGGTTCAAAGACTCTTAGATGACAAAGATTCGAGGAGAGGCCCTTTGGTACTTCCGCAGCCTTACACTTTCAAGCCCACTAGTTGAACAAAACACCATCCCC
AGGCGGAACTATTTTGGGCGGTCAGAATCTCATGACTATTGTTATTTTGTTTTGTTTTCTTTTGTTCCTTCTCTTACTTTGTACAGAGATGACTGTGGCGATAAACTTCA
TAATAATGCACTCTTCTTACCAACTTACAAAAGCCTATTCCTTTCCTTTGATACATATAATTTGAATGTATAGTAGGATCTACTTCTAATCAGCAAAGTGAAAAATTATT
TAATGAGACATCTAAAATGTGGCTGCTCTTTAATAATTGTGGGACGTGGATTCAAAAATCTGAATGCCCCCTAATAACCATTTGATATAAATTTGAAGTATTTGTGCAGT
TTCTGTCTCCTA

Protein sequence

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MAPETDPSGGSEEVHTDVLAEFRQACYKARDAFYACVEKESDKKPTEIASVGLLYPAECKASRAEFVKLCRASWVKHFDRKFCQNSRVQRLLDDKDSRRGPLVLPQPYTF
KPTS

Carg14095 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome