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Carg14137 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14137
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein SPIRAL1-like 5
Genome locationCarg_Chr04:3982988..3983719
RNA-Seq ExpressionCarg14137
SyntenyCarg14137
Gene Ontology termsGO:0043622 - cortical microtubule organization (biological process)
GO:0010005 - cortical microtubule, transverse to long axis (cellular component)
InterPro domainsIPR039613 - Protein SPIRAL1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146520.1 protein SPIRAL1-like 5 [Cucumis sativus]2.2e-4291Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD-QNNPSPSPKQAAS-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD  NNPSPSPKQ  S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD-QNNPSPSPKQAAS-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGD

XP_008452039.1 PREDICTED: protein SPIRAL1-like 5 [Cucumis melo]7.6e-4390.2Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAAS-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD   NNPSPSPKQ  S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAAS-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

XP_022136791.1 protein SPIRAL1-like 5 [Momordica charantia]4.4e-4389Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQ-NNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK
        MSRGGSYGGGRSSLGYLFGNDD+P KPQVS+V+LPPPYGIDI+PDDQ NNPSPSPKQ  SNNYPRAHGQNSGNF+TDRPSTKVKS PG DSSLGYLFGDK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQ-NNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK

XP_022941576.1 protein SPIRAL1-like 5 [Cucurbita moschata]4.2e-49100Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK
        MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK

XP_038883008.1 protein SPIRAL1-like 5 [Benincasa hispida]3.1e-4491.09Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGD
        MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD   NNPSPSPKQ  SNNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

TrEMBL top hitse value%identityAlignment
A0A1S3BTQ0 protein SPIRAL1-like 53.7e-4390.2Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAAS-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD   NNPSPSPKQ  S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAAS-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A5D3CZ49 Protein SPIRAL1-like 53.7e-4390.2Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAAS-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFG
        MSRGGSYGGGRSSLGYLFG DD+PRKPQVSKVVLPPPYGID+NPDD   NNPSPSPKQ  S NNYPRAHGQNSGNFITDRPSTKVKS PGGDSSLGYLFG
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDD--QNNPSPSPKQAAS-NNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFG

Query:  DK
        DK
Subjt:  DK

A0A6J1C4I1 protein SPIRAL1-like 52.2e-4389Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQ-NNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK
        MSRGGSYGGGRSSLGYLFGNDD+P KPQVS+V+LPPPYGIDI+PDDQ NNPSPSPKQ  SNNYPRAHGQNSGNF+TDRPSTKVKS PG DSSLGYLFGDK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQ-NNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK

A0A6J1FLH4 protein SPIRAL1-like 52.0e-49100Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK
        MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK

A0A6J1J7K0 protein SPIRAL1-like 52.0e-49100Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK
        MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK

SwissProt top hitse value%identityAlignment
B3H4F1 Protein SPIRAL1-like 13.3e-1747.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAA------------------SNNYPRAHGQNSGNFITDRPSTKV
        M RG S GGG+SSLGYLFG+ + P KP ++    P    + I+ D      PSPK  A                  +NNY RA GQN+GNF+TDRPSTKV
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAA------------------SNNYPRAHGQNSGNFITDRPSTKV

Query:  KSVPGGDSSLGYLFG
         + PGG SSL YLFG
Subjt:  KSVPGGDSSLGYLFG

Q2QQ99 Protein SPIRAL1-like 39.1e-1549.48Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAA-SNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLF
        M RG S GGG+SSLGYLFG  + P+  +    V  P      +  ++    P+  Q++ +NNY RA GQN GNF+TDRPSTKV++ PGG SSL YLF
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAA-SNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLF

Q7Y1L9 Protein SPIRAL1-like 13.0e-1848.25Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPR-----KPQVSKVVLPPPYGIDINPDDQNNPSPSPKQA------------ASNNYPRAHGQNSGNFITDRPSTKVK
        MSRGGS GGG+SSLGYLFG ++ P+      P  +    P P            PSP+   A            ++NNY RA GQN+GNF+TDRPSTKV 
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPR-----KPQVSKVVLPPPYGIDINPDDQNNPSPSPKQA------------ASNNYPRAHGQNSGNFITDRPSTKVK

Query:  SVPGGDSSLGYLFG
        + PGG SSLGYLFG
Subjt:  SVPGGDSSLGYLFG

Q8LGD1 Protein SPIRAL1-like 51.1e-2563.37Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDE-PRKPQVSKVVLP-PPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGD
        MSRGGS+GGG+SSLGYLFG+D+E P+ P       P PPYG+D   +D +     PK  ++NNY R  GQNSGNF+TDRP+TKVKSVPGG SSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDE-PRKPQVSKVVLP-PPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K

Q9LE54 Protein SPIRAL1-like 23.3e-1750.94Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVV--------LPPPYGIDINPDDQNNPSPSPKQA-ASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSS
        M RG S GGG+SSLGYLFG+ + P+   V+K           PP      N  D     P+   + ++NNY RA GQN+GNFITDRPSTKV S PGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVV--------LPPPYGIDINPDDQNNPSPSPKQA-ASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

Arabidopsis top hitse value%identityAlignment
AT1G26355.1 SPIRAL1-like12.4e-1847.83Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAA------------------SNNYPRAHGQNSGNFITDRPSTKV
        M RG S GGG+SSLGYLFG+ + P KP ++    P    + I+ D      PSPK  A                  +NNY RA GQN+GNF+TDRPSTKV
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAA------------------SNNYPRAHGQNSGNFITDRPSTKV

Query:  KSVPGGDSSLGYLFG
         + PGG SSL YLFG
Subjt:  KSVPGGDSSLGYLFG

AT1G69230.1 SPIRAL1-like22.4e-1850.94Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVV--------LPPPYGIDINPDDQNNPSPSPKQA-ASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSS
        M RG S GGG+SSLGYLFG+ + P+   V+K           PP      N  D     P+   + ++NNY RA GQN+GNFITDRPSTKV S PGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVV--------LPPPYGIDINPDDQNNPSPSPKQA-ASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

AT1G69230.2 SPIRAL1-like22.4e-1850.94Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVV--------LPPPYGIDINPDDQNNPSPSPKQA-ASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSS
        M RG S GGG+SSLGYLFG+ + P+   V+K           PP      N  D     P+   + ++NNY RA GQN+GNFITDRPSTKV S PGG SS
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVV--------LPPPYGIDINPDDQNNPSPSPKQA-ASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSS

Query:  LGYLFG
        L YLFG
Subjt:  LGYLFG

AT2G03680.1 spiral16.5e-1643.48Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDEPRKP---------QVSKVVLPPPYGI----------DINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTK
        M RG S GGG+SSL YLFG D    KP         + +    PP   +           + P + N   P+  +   NNY RA GQN+GNF+TDRPSTK
Subjt:  MSRGGSYGGGRSSLGYLFGNDDEPRKP---------QVSKVVLPPPYGI----------DINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTK

Query:  VKSVPGGDSSLGYLF
        V + PGG SSL YLF
Subjt:  VKSVPGGDSSLGYLF

AT4G23496.1 SPIRAL1-like58.1e-2763.37Show/hide
Query:  MSRGGSYGGGRSSLGYLFGNDDE-PRKPQVSKVVLP-PPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGD
        MSRGGS+GGG+SSLGYLFG+D+E P+ P       P PPYG+D   +D +     PK  ++NNY R  GQNSGNF+TDRP+TKVKSVPGG SSLGYLFGD
Subjt:  MSRGGSYGGGRSSLGYLFGNDDE-PRKPQVSKVVLP-PPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGD

Query:  K
        K
Subjt:  K


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAGAGGTGGAAGCTATGGCGGTGGAAGAAGCTCGTTGGGGTATCTTTTTGGAAACGACGATGAACCCAGAAAGCCTCAAGTCTCAAAAGTGGTTCTTCCTCCTCC
TTATGGAATTGATATCAACCCTGATGACCAAAACAACCCTTCCCCCTCTCCAAAACAAGCTGCCTCCAACAATTATCCCCGAGCTCATGGCCAAAACTCGGGCAACTTCA
TCACGGATCGCCCATCAACCAAGGTCAAATCTGTTCCTGGTGGTGATTCATCGCTAGGGTATCTGTTTGGAGATAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATAGGGATCATCATCATCATCATATATATATATATATAAACAACCAAAATTAGGGTTTGAACTTTCCTTGGTTGCCAATTTTGGTTTTGGTTCAGATCAGATCATGAGCA
GAGGTGGAAGCTATGGCGGTGGAAGAAGCTCGTTGGGGTATCTTTTTGGAAACGACGATGAACCCAGAAAGCCTCAAGTCTCAAAAGTGGTTCTTCCTCCTCCTTATGGA
ATTGATATCAACCCTGATGACCAAAACAACCCTTCCCCCTCTCCAAAACAAGCTGCCTCCAACAATTATCCCCGAGCTCATGGCCAAAACTCGGGCAACTTCATCACGGA
TCGCCCATCAACCAAGGTCAAATCTGTTCCTGGTGGTGATTCATCGCTAGGGTATCTGTTTGGAGATAAGTGAAGTGAAGTGAATGATTTATGTGTTCCATTAGTAGCTG
ATCATATTGGAACTCTAAAGGGTATGTATGCTTTGCTTTAGTGTGCGGATTTGTAATAAATTGTGTGCAATTATTATGTATCTCAACCAACACTTAGACTGAATTATATT
TCTGTACTTTGTTGCTTCTACCAAATATGTTATGTATTCAATAGCATCTTGCCGACTTGTGGTTTGATTATGTTTGTGGTTAAGTATAAGAAATTCCACTTTTCCTTT
Protein sequenceShow/hide protein sequence
MSRGGSYGGGRSSLGYLFGNDDEPRKPQVSKVVLPPPYGIDINPDDQNNPSPSPKQAASNNYPRAHGQNSGNFITDRPSTKVKSVPGGDSSLGYLFGDK