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Carg14154 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14154
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionlate embryogenesis abundant protein D-29-like
Genome locationCarg_Chr04:4067173..4067977
RNA-Seq ExpressionCarg14154
SyntenyCarg14154
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600582.1 hypothetical protein SDJN03_05815, partial [Cucurbita argyrosperma subsp. sororia]3.6e-103100Show/hide
Query:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
Subjt:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_022942848.1 late embryogenesis abundant protein D-29-like [Cucurbita moschata]1.3e-10098.54Show/hide
Query:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGT TWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
Subjt:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMD AGDAATKTTHTI TAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_022983013.1 late embryogenesis abundant protein D-29-like [Cucurbita maxima]4.1e-7578.16Show/hide
Query:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGT TWSFVAVLWLLWA EMGVVEKCRGEIGQGA+KDVKDNITEI EM N++GKAEA+KKGASEVFNDAKDAAESWSNWASA+ISKGLGLEEEGLKQTAH
Subjt:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMM                                 DKA DAKTKAK+T VNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_023533965.1 uncharacterized protein LOC111795650 [Cucurbita pepo subsp. pepo]4.0e-9493.2Show/hide
Query:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGT TWSFVAVLWLL AAEMGVVEKCRG +G+GAM+DVKDNITEIMEMTN+EGKAEAVKKGASEVFNDAKDAAES SNWASA+I+KGLGLEEEGLKQTAH
Subjt:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMD AGDAATKTTHTIHTAASDASDKAGEAVKAVSDKAS+AKTKAKDTF+NGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKE ASHAAVQIGAKIR
Subjt:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

XP_038906279.1 late embryogenesis abundant protein D-29 isoform X2 [Benincasa hispida]1.3e-4957.52Show/hide
Query:  TRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHM
        T   S VAV+WLL      V +KCRG +G+ A++DVKDN++EI + T+++ KAEAVK GAS+VF+DAK+ AESWSNWA  +ISKGLG   E LK+TAH++
Subjt:  TRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHM

Query:  MDLAGDAATKTTHTIHTAASD----ASDKAGEAVKAVSD------------------KASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN
        +D AGDAATKTT  + TAASD    AS+KAGEAVKA SD                  KASD KTKAK+T V+GK+KAA+VYEAAK EV ++  A KE VN
Subjt:  MDLAGDAATKTTHTIHTAASD----ASDKAGEAVKAVSD------------------KASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN

Query:  CEAAKEMASHAAVQIGAKIREKSSEL
        C AAKEMAS +A +IG +IREK++EL
Subjt:  CEAAKEMASHAAVQIGAKIREKSSEL

TrEMBL top hitse value%identityAlignment
A0A0A0KUJ5 Uncharacterized protein9.3e-4152.7Show/hide
Query:  MGTRTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA
        MG +T +  VAV+WL+      V EKC G  G+ A+KDVK+N++EI E  N++ KAEAVK  ASEV+ +AKD  ESWSNWA  +IS+GLGL EE +K+TA
Subjt:  MGTRTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA

Query:  HHMMDLAGDAATKTTHTIHTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA
        H++ D AGDAA KTT  I+TAASD    AS+KAGEA KA S+ AS  K+K+           K+T V+GK+KAA++YEAAK          K+  NCE A
Subjt:  HHMMDLAGDAATKTTHTIHTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA

Query:  KEMASHAAVQIGAKIREKSSEL
        +EMAS  A +IG +IREKS+EL
Subjt:  KEMASHAAVQIGAKIREKSSEL

A0A1S3BT31 late embryogenesis abundant protein D-29-like6.1e-4053.15Show/hide
Query:  MGTRTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA
        MG +T +  VAV+WL+      V EKC G  G+ A++DVKDN++EI E   ++ KAEAVK  ASEV++DAKD AESWSNWA  +ISKGLGL E+ LK+TA
Subjt:  MGTRTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA

Query:  HHMMDLAGDAATKTTHTIHTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA
        H++ D AGDAA KTT  I+TAAS     AS+KAGEA KA S+ AS+ K+K+           K+T V+GK+KAA+VYEAAK          K+  NCE A
Subjt:  HHMMDLAGDAATKTTHTIHTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA

Query:  KEMASHAAVQIGAKIREKSSEL
        +EMAS  A +IG +IREK++EL
Subjt:  KEMASHAAVQIGAKIREKSSEL

A0A5A7TSE6 Late embryogenesis abundant protein D-29-like6.1e-4053.15Show/hide
Query:  MGTRTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA
        MG +T +  VAV+WL+      V EKC G  G+ A++DVKDN++EI E   ++ KAEAVK  ASEV++DAKD AESWSNWA  +ISKGLGL E+ LK+TA
Subjt:  MGTRTWSF-VAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTA

Query:  HHMMDLAGDAATKTTHTIHTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA
        H++ D AGDAA KTT  I+TAAS     AS+KAGEA KA S+ AS+ K+K+           K+T V+GK+KAA+VYEAAK          K+  NCE A
Subjt:  HHMMDLAGDAATKTTHTIHTAASD----ASDKAGEAVKAVSDKASDAKTKA-----------KDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAA

Query:  KEMASHAAVQIGAKIREKSSEL
        +EMAS  A +IG +IREK++EL
Subjt:  KEMASHAAVQIGAKIREKSSEL

A0A6J1FVT6 late embryogenesis abundant protein D-29-like6.2e-10198.54Show/hide
Query:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGT TWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
Subjt:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMMD AGDAATKTTHTI TAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

A0A6J1J6J8 late embryogenesis abundant protein D-29-like2.0e-7578.16Show/hide
Query:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH
        MGT TWSFVAVLWLLWA EMGVVEKCRGEIGQGA+KDVKDNITEI EM N++GKAEA+KKGASEVFNDAKDAAESWSNWASA+ISKGLGLEEEGLKQTAH
Subjt:  MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAH

Query:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
        HMM                                 DKA DAKTKAK+T VNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR
Subjt:  HMMDLAGDAATKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIR

Query:  EKSSEL
        EKSSEL
Subjt:  EKSSEL

SwissProt top hitse value%identityAlignment
P13940 Late embryogenesis abundant protein D-291.8e-0429.94Show/hide
Query:  IEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGL-EEEGLKQTAHHMMDLAGDAATKTTHTIHTAAS--------DASDKAGEAVKAVSDKASD
        ++   +  K  ASEV  +AK+  ESW+ WA  +IS+GLG  +++  K +     D   D ATKT   +   AS         A D    A K   D  + 
Subjt:  IEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGL-EEEGLKQTAHHMMDLAGDAATKTTHTIHTAAS--------DASDKAGEAVKAVSDKASD

Query:  AKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN--CEAAKEMASHAAVQIGAKIREKSSEL
        AK K+ +      EKA ++ ++AK        A KE V    +   EM + A  + GA+  E++ E+
Subjt:  AKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVN--CEAAKEMASHAAVQIGAKIREKSSEL

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGACAAGGACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGCGGAGATGGGGGTGGTGGAAAAATGCAGGGGTGAAATAGGACAAGGGGCAATGAAGGA
TGTGAAGGATAATATCACTGAAATTATGGAGATGACGAATATTGAGGGAAAAGCAGAAGCCGTTAAGAAAGGTGCTTCTGAAGTGTTTAATGACGCCAAGGACGCAGCTG
AGTCTTGGTCCAACTGGGCTTCCGCTCAGATTTCCAAGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGATGGACTTAGCCGGCGACGCAGCC
ACAAAAACCACACACACAATCCACACAGCAGCTTCAGATGCATCTGACAAAGCCGGAGAGGCGGTGAAGGCGGTGTCGGATAAAGCCAGCGACGCCAAAACGAAGGCCAA
AGACACGTTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAAGCGGCTAAAACCGAAGTGGAGCGGGAAGTTGCGGCGGTTAAGGAGTGTGTGAACTGTGAAGCTG
CTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGACAAGGACGTGGTCGTTTGTGGCGGTTTTGTGGCTGTTATGGGCGGCGGAGATGGGGGTGGTGGAAAAATGCAGGGGTGAAATAGGACAAGGGGCAATGAAGGA
TGTGAAGGATAATATCACTGAAATTATGGAGATGACGAATATTGAGGGAAAAGCAGAAGCCGTTAAGAAAGGTGCTTCTGAAGTGTTTAATGACGCCAAGGACGCAGCTG
AGTCTTGGTCCAACTGGGCTTCCGCTCAGATTTCCAAGGGATTAGGATTGGAAGAAGAAGGATTGAAACAGACAGCCCACCACATGATGGACTTAGCCGGCGACGCAGCC
ACAAAAACCACACACACAATCCACACAGCAGCTTCAGATGCATCTGACAAAGCCGGAGAGGCGGTGAAGGCGGTGTCGGATAAAGCCAGCGACGCCAAAACGAAGGCCAA
AGACACGTTTGTGAACGGGAAAGAGAAGGCGGCGAAGGTGTATGAAGCGGCTAAAACCGAAGTGGAGCGGGAAGTTGCGGCGGTTAAGGAGTGTGTGAACTGTGAAGCTG
CTAAAGAGATGGCGTCGCATGCCGCCGTACAAATCGGGGCGAAGATAAGGGAGAAGTCCTCGGAGCTGTGA
Protein sequenceShow/hide protein sequence
MGTRTWSFVAVLWLLWAAEMGVVEKCRGEIGQGAMKDVKDNITEIMEMTNIEGKAEAVKKGASEVFNDAKDAAESWSNWASAQISKGLGLEEEGLKQTAHHMMDLAGDAA
TKTTHTIHTAASDASDKAGEAVKAVSDKASDAKTKAKDTFVNGKEKAAKVYEAAKTEVEREVAAVKECVNCEAAKEMASHAAVQIGAKIREKSSEL