; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14168 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14168
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein SHI RELATED SEQUENCE 1-like
Genome locationCarg_Chr04:4129188..4130208
RNA-Seq ExpressionCarg14168
SyntenyCarg14168
Gene Ontology termsGO:0009734 - auxin-activated signaling pathway (biological process)
GO:0009851 - auxin biosynthetic process (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
InterPro domainsIPR006510 - Zinc finger, lateral root primordium type 1
IPR006511 - SHORT INTERNODES, C-terminal
IPR007818 - SHI protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600597.1 Protein RTE1-HOMOLOG, partial [Cucurbita argyrosperma subsp. sororia]1.8e-147100Show/hide
Query:  MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
        EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA
Subjt:  EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAA

KAG7031235.1 Protein SHORT INTERNODES, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-154100Show/hide
Query:  MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

XP_022942307.1 protein SHORT INTERNODES-like [Cucurbita moschata]7.3e-14998.13Show/hide
Query:  MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGF+PLGGGREPNYHLPTTTTTTTDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEM NFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        EQQQQ PPPPPPNSASPDGG LLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

XP_023552309.1 protein SHI RELATED SEQUENCE 1-like isoform X1 [Cucurbita pepo subsp. pepo]8.6e-15098.13Show/hide
Query:  MAGFYPLGGGREPNYHLPTTTTTT-TDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR
        MAGFYPLGGGREPNYHLPTTTTTT TDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR
Subjt:  MAGFYPLGGGREPNYHLPTTTTTT-TDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR

Query:  TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG
        TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGN PVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG
Subjt:  TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG

Query:  PEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        PEQQQQPPPPPPPNSASPDGG LLITAPSTTMELPPIS ALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  PEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

XP_023552316.1 protein SHI RELATED SEQUENCE 1-like isoform X2 [Cucurbita pepo subsp. pepo]4.0e-14797.39Show/hide
Query:  MAGFYPLGGGREPNYHLPTTTTTT-TDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR
        MAGFYPLGGGREPNYHLPTTTTTT TDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR
Subjt:  MAGFYPLGGGREPNYHLPTTTTTT-TDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCR

Query:  TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG
        TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASS  EMGN PVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG
Subjt:  TCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHG

Query:  PEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        PEQQQQPPPPPPPNSASPDGG LLITAPSTTMELPPIS ALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  PEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

TrEMBL top hitse value%identityAlignment
A0A0A0KUG2 Uncharacterized protein3.4e-9967.13Show/hide
Query:  MAGFYPL----GGGREPNYHLPTTTT------TTTDGLFWYRNYESLEIW-------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVI
        MAGF+PL     GGR PNYH PT TT       TT+GLFWY+NYE LE W       QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR    GGG V 
Subjt:  MAGFYPL----GGGREPNYHLPTTTT------TTTDGLFWYRNYESLEIW-------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQVI

Query:  SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN--TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQF
        SCQDCGNQAKKDC+HMRCRTCCKSRGF+CETHVKSTWVPASKRR+RHLRSDG N KRP+D      SSGL+MGNFP EV++ AVFRCVRMT+LDET+DQ+
Subjt:  SCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN--TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQF

Query:  AYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        AYQTAVNIGG  FKGILYDHGPEQ     PPPPP+S+                     SAALLDP PPYP PL+TY+ AGTQFFLPP+S
Subjt:  AYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

A0A1S3CNX3 protein SHI RELATED SEQUENCE 1-like8.3e-9866.55Show/hide
Query:  MAGFYPL----GGGREPNYHLPTTTT------TTTDGLFWYRNYESLEIW--------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQV
        MAGF+PL     GGR PNYH PT TT       TT+GLFWY+NYE LE W        QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V
Subjt:  MAGFYPL----GGGREPNYHLPTTTT------TTTDGLFWYRNYESLEIW--------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQV

Query:  ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN--TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQ
         SCQDCGNQAKKDC HMRCRTCCKSRGF+CETHVKSTWVPASKRR+R LRSDG N KRP+D      SSGL+M NFP+EV++ AVFRCVRMTTLDET+DQ
Subjt:  ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN--TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQ

Query:  FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        +AYQTAVNIGGH FKGILYDHGPEQ     PPPPP+S+S                    +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Subjt:  FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

A0A5A7TNR6 Protein SHI RELATED SEQUENCE 1-like8.3e-9866.55Show/hide
Query:  MAGFYPL----GGGREPNYHLPTTTT------TTTDGLFWYRNYESLEIW--------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQV
        MAGF+PL     GGR PNYH PT TT       TT+GLFWY+NYE LE W        QQQ  Q+Q GEGFVYSGDESP RSSLVM+RSGR   +GGG V
Subjt:  MAGFYPL----GGGREPNYHLPTTTT------TTTDGLFWYRNYESLEIW--------QQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGR---NGGGQV

Query:  ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN--TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQ
         SCQDCGNQAKKDC HMRCRTCCKSRGF+CETHVKSTWVPASKRR+R LRSDG N KRP+D      SSGL+M NFP+EV++ AVFRCVRMTTLDET+DQ
Subjt:  ISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN--TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQ

Query:  FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        +AYQTAVNIGGH FKGILYDHGPEQ     PPPPP+S+S                    +AALLD  PPYP PL+TY+ AGTQFFLPP+S
Subjt:  FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

A0A6J1FUH1 protein SHORT INTERNODES-like3.5e-14998.13Show/hide
Query:  MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGF+PLGGGREPNYHLPTTTTTTTDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEM NFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        EQQQQ PPPPPPNSASPDGG LLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

A0A6J1J480 protein SHI RELATED SEQUENCE 1-like2.4e-14596.25Show/hide
Query:  MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
        MAGF+PLGGGREPNYHLP  TTTTTDGLFWYRNYESL IWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT
Subjt:  MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRT

Query:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
        CCKSRGFDCETHVKSTWVPASKRRERHLRSD TNLKRPRDNTAASSGLEMGNFP+EVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP
Subjt:  CCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGP

Query:  EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
        EQQQQ  PPPPPNSASPDGG LLITAP+TTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
Subjt:  EQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

SwissProt top hitse value%identityAlignment
K4B6C9 Protein EXPRESSION OF TERPENOIDS 15.8e-4839.44Show/hide
Query:  MAGFYPLGGGREPNYHLPTTT----TTTTDGLFWYRN--------------YESLEIW----------QQQQVQQQ----------------------AG
        MA F+ LGG +E  +   +++     T ++  F YRN              Y+  E+W          Q  Q QQQ                      + 
Subjt:  MAGFYPLGGGREPNYHLPTTT----TTTTDGLFWYRN--------------YESLEIW----------QQQQVQQQ----------------------AG

Query:  EGF-VYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR--------------SDGTNL
         GF + +GD    RS  VM+RSG  GGG  ISCQDCGNQAKKDC HMRCRTCCKSRGF C+THVKSTWVPA+KRRER  +              ++    
Subjt:  EGF-VYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR--------------SDGTNL

Query:  KRPRDNTAASS-----------GLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ--QQPPPPPPPNSASPDGG--
        KR R++ +ASS           GLE+G FP +V ++AVF+C++M+++++  DQ AYQ AV+IGGH FKGILYD G E Q           +S    GG  
Subjt:  KRPRDNTAASS-----------GLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQ--QQPPPPPPPNSASPDGG--

Query:  ----TLLITAPSTTMELPPISAA----LLDPPPPYPAPLNTYVAAGTQFFLPPTS
                 A +TT      +AA     LD P  +PAPL+T++ AGTQFF P  S
Subjt:  ----TLLITAPSTTMELPPISAA----LLDPPPPYPAPLNTYVAAGTQFFLPPTS

Q9FXH7 Protein SHI RELATED SEQUENCE 74.0e-4143.25Show/hide
Query:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN----------------
        D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTWV A+KRRER  +      KR RD                 
Subjt:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN----------------

Query:  -----------------TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGT---
                          A+SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP             S+S +G T   
Subjt:  -----------------TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGT---

Query:  ----LLITAPS--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF
            L+ + PS  TT  +  ++     +DP   Y A   P N +VA GT FF
Subjt:  ----LLITAPS--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF

Q9LQZ5 Protein SHI RELATED SEQUENCE 53.1e-4141.5Show/hide
Query:  YRNYESLEIW-----------QQQQVQQQAGE-------GFVYSGDES-----PPRSSLVMLRSGRNGGGQVI------SCQDCGNQAKKDCLHMRCRTC
        Y N +  EIW           QQQQ QQ A         G V SG  S       RS    + S    GG  +      +CQDCGNQAKKDC HMRCRTC
Subjt:  YRNYESLEIW-----------QQQQVQQQAGE-------GFVYSGDES-----PPRSSLVMLRSGRNGGGQVI------SCQDCGNQAKKDCLHMRCRTC

Query:  CKSRGFDCETHVKSTWVPASKRRER---------HLRS--DGTNLKRPRD--------------------------NTAASSGLEMG-NFPVEVSSTAVF
        CKSRGF C+THVKSTWVPA+KRRER         H  S  +  N KR R+                          N  ++SGLE+  + P EV+S A+F
Subjt:  CKSRGFDCETHVKSTWVPASKRRER---------HLRS--DGTNLKRPRD--------------------------NTAASSGLEMG-NFPVEVSSTAVF

Query:  RCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQF
        RCVR+++++E  D   +AYQTAVNIGGH FKGILYD GPE Q         ++A+    T +    + T+     +  +LDP   YPA LN+++ AGT F
Subjt:  RCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQF

Query:  FLPPTS
        F PP S
Subjt:  FLPPTS

Q9SD40 Protein SHI RELATED SEQUENCE 11.3e-4748.18Show/hide
Query:  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR----SDGTNL-------KRPRDNTAAS------
        ++++M+RSG +GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+STWVPA+KRRER  +       T L       KR R+N  A+      
Subjt:  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR----SDGTNL-------KRPRDNTAAS------

Query:  ------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGG-------------TLLITA
              SGLE+GNFP EVSS+AVFRCVR++++++  ++FAYQTAV+IGGH FKGILYD GP               S  GG               + TA
Subjt:  ------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGG-------------TLLITA

Query:  PSTTMELPPI------SAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
         S+T  L  I      +A  +DP   YP P+NT++ AGTQFF  P S
Subjt:  PSTTMELPPI------SAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

Q9XGX0 Protein SHORT INTERNODES5.2e-4941.34Show/hide
Query:  MAGFYPL---GGGREPNYHLPTT---TTTTTDGLFWYRNYES--------------LEIW----------QQQQVQQQ--------AGEGFVYSGDESPP
        MAGF+ L   GGG  P+ H   T   +++ T+   W RN  S              LE+W          QQQQ QQQ        AG G   S      
Subjt:  MAGFYPL---GGGREPNYHLPTT---TTTTTDGLFWYRNYES--------------LEIW----------QQQQVQQQ--------AGEGFVYSGDESPP

Query:  RS--SLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSD---------GTNLKRPRDNTAA-------
         S  +L+M+RSG   GG   SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRER  +           G+  KR R+   A       
Subjt:  RS--SLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSD---------GTNLKRPRDNTAA-------

Query:  -------SSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTME---LP
               +SGLE+GNFP EVSS+AVFRCVR++++D+  +++AY+TAV+IGGH FKG+LYD GP ++        P +    G +   ++P+ +     + 
Subjt:  -------SSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTME---LP

Query:  PISAALLDPPP-PYPAPLNTYVAAGTQFF
          S   +DP    YP P+NT++  GT FF
Subjt:  PISAALLDPPP-PYPAPLNTYVAAGTQFF

Arabidopsis top hitse value%identityAlignment
AT1G19790.1 SHI-related sequence 72.8e-4243.25Show/hide
Query:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN----------------
        D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTWV A+KRRER  +      KR RD                 
Subjt:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN----------------

Query:  -----------------TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGT---
                          A+SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP             S+S +G T   
Subjt:  -----------------TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGT---

Query:  ----LLITAPS--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF
            L+ + PS  TT  +  ++     +DP   Y A   P N +VA GT FF
Subjt:  ----LLITAPS--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF

AT1G19790.2 SHI-related sequence 72.8e-4243.25Show/hide
Query:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN----------------
        D  P RSS       R G    ++CQDCGNQAKKDC HMRCRTCCKSRGFDC+THVKSTWV A+KRRER  +      KR RD                 
Subjt:  DESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSDGTNLKRPRDN----------------

Query:  -----------------TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGT---
                          A+SSGLE  + P E+SS AVFRC+R++++D+ ++++AYQTAV+IGGH FKGILYD GP             S+S +G T   
Subjt:  -----------------TAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGT---

Query:  ----LLITAPS--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF
            L+ + PS  TT  +  ++     +DP   Y A   P N +VA GT FF
Subjt:  ----LLITAPS--TTMELPPISA--ALLDPPPPYPA---PLNTYVAAGTQFF

AT1G75520.1 SHI-related sequence 52.2e-4241.5Show/hide
Query:  YRNYESLEIW-----------QQQQVQQQAGE-------GFVYSGDES-----PPRSSLVMLRSGRNGGGQVI------SCQDCGNQAKKDCLHMRCRTC
        Y N +  EIW           QQQQ QQ A         G V SG  S       RS    + S    GG  +      +CQDCGNQAKKDC HMRCRTC
Subjt:  YRNYESLEIW-----------QQQQVQQQAGE-------GFVYSGDES-----PPRSSLVMLRSGRNGGGQVI------SCQDCGNQAKKDCLHMRCRTC

Query:  CKSRGFDCETHVKSTWVPASKRRER---------HLRS--DGTNLKRPRD--------------------------NTAASSGLEMG-NFPVEVSSTAVF
        CKSRGF C+THVKSTWVPA+KRRER         H  S  +  N KR R+                          N  ++SGLE+  + P EV+S A+F
Subjt:  CKSRGFDCETHVKSTWVPASKRRER---------HLRS--DGTNLKRPRD--------------------------NTAASSGLEMG-NFPVEVSSTAVF

Query:  RCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQF
        RCVR+++++E  D   +AYQTAVNIGGH FKGILYD GPE Q         ++A+    T +    + T+     +  +LDP   YPA LN+++ AGT F
Subjt:  RCVRMTTLDETNDQ--FAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQF

Query:  FLPPTS
        F PP S
Subjt:  FLPPTS

AT3G51060.1 Lateral root primordium (LRP) protein-related9.1e-4948.18Show/hide
Query:  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR----SDGTNL-------KRPRDNTAAS------
        ++++M+RSG +GGG   +SCQDCGNQAKKDC HMRCRTCCKSRGF+C THV+STWVPA+KRRER  +       T L       KR R+N  A+      
Subjt:  SSLVMLRSGRNGGGQ-VISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLR----SDGTNL-------KRPRDNTAAS------

Query:  ------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGG-------------TLLITA
              SGLE+GNFP EVSS+AVFRCVR++++++  ++FAYQTAV+IGGH FKGILYD GP               S  GG               + TA
Subjt:  ------SGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGG-------------TLLITA

Query:  PSTTMELPPI------SAALLDPPPPYPAPLNTYVAAGTQFFLPPTS
         S+T  L  I      +A  +DP   YP P+NT++ AGTQFF  P S
Subjt:  PSTTMELPPI------SAALLDPPPPYPAPLNTYVAAGTQFFLPPTS

AT5G66350.1 Lateral root primordium (LRP) protein-related3.7e-5041.34Show/hide
Query:  MAGFYPL---GGGREPNYHLPTT---TTTTTDGLFWYRNYES--------------LEIW----------QQQQVQQQ--------AGEGFVYSGDESPP
        MAGF+ L   GGG  P+ H   T   +++ T+   W RN  S              LE+W          QQQQ QQQ        AG G   S      
Subjt:  MAGFYPL---GGGREPNYHLPTT---TTTTTDGLFWYRNYES--------------LEIW----------QQQQVQQQ--------AGEGFVYSGDESPP

Query:  RS--SLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSD---------GTNLKRPRDNTAA-------
         S  +L+M+RSG   GG   SCQDCGNQ+KKDC HMRCRTCCKSRG DC THVKSTWVPA+KRRER  +           G+  KR R+   A       
Subjt:  RS--SLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCETHVKSTWVPASKRRERHLRSD---------GTNLKRPRDNTAA-------

Query:  -------SSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTME---LP
               +SGLE+GNFP EVSS+AVFRCVR++++D+  +++AY+TAV+IGGH FKG+LYD GP ++        P +    G +   ++P+ +     + 
Subjt:  -------SSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGGTLLITAPSTTME---LP

Query:  PISAALLDPPP-PYPAPLNTYVAAGTQFF
          S   +DP    YP P+NT++  GT FF
Subjt:  PISAALLDPPP-PYPAPLNTYVAAGTQFF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGTTTTTACCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCT
TGAAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAA
ACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAA
ACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGGCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGG
GTTAGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGAATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCG
TCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGC
ACCCTCCTCATCACCGCCCCCTCCACCACCATGGAATTGCCACCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGC
CGGTACGCAATTTTTTCTTCCCCCAACGTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGTTTTTACCCACTAGGCGGCGGAAGAGAACCCAATTATCACCTTCCCACTACCACCACCACCACCACGGACGGATTATTTTGGTACAGAAATTATGAGAGCCT
TGAAATATGGCAGCAACAGCAGGTGCAGCAGCAAGCGGGAGAAGGGTTTGTTTACTCGGGCGATGAATCGCCTCCAAGATCGTCGTTGGTGATGCTGAGATCCGGCAGAA
ACGGGGGAGGGCAAGTAATAAGCTGCCAAGACTGTGGAAATCAAGCCAAAAAGGATTGCCTTCACATGCGATGTAGAACTTGCTGTAAAAGTCGTGGCTTTGACTGTGAA
ACCCACGTCAAAAGTACTTGGGTTCCGGCCTCCAAACGCCGTGAGCGACACCTCCGCAGCGACGGCACTAATCTCAAACGACCTCGAGACAACACCGCCGCTTCCTCAGG
GTTAGAAATGGGGAATTTTCCGGTGGAAGTGAGCTCAACGGCGGTGTTTCGGTGCGTGCGAATGACAACGTTGGACGAAACCAACGACCAATTTGCTTACCAAACAGCCG
TCAACATCGGAGGCCATACCTTCAAGGGCATTCTTTACGACCACGGCCCTGAACAACAACAACAACCACCACCACCACCACCACCCAACTCCGCCTCCCCCGACGGTGGC
ACCCTCCTCATCACCGCCCCCTCCACCACCATGGAATTGCCACCCATCAGCGCCGCATTGCTCGATCCTCCTCCGCCGTACCCAGCTCCTCTGAACACCTACGTCGCCGC
CGGTACGCAATTTTTTCTTCCCCCAACGTCTTAA
Protein sequenceShow/hide protein sequence
MAGFYPLGGGREPNYHLPTTTTTTTDGLFWYRNYESLEIWQQQQVQQQAGEGFVYSGDESPPRSSLVMLRSGRNGGGQVISCQDCGNQAKKDCLHMRCRTCCKSRGFDCE
THVKSTWVPASKRRERHLRSDGTNLKRPRDNTAASSGLEMGNFPVEVSSTAVFRCVRMTTLDETNDQFAYQTAVNIGGHTFKGILYDHGPEQQQQPPPPPPPNSASPDGG
TLLITAPSTTMELPPISAALLDPPPPYPAPLNTYVAAGTQFFLPPTS