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Carg14221 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14221
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:4427261..4429513
RNA-Seq ExpressionCarg14221
SyntenyCarg14221
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600176.1 hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]5.2e-1172.88Show/hide
Query:  MLAEERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILL
        +LAEE RTTNSY+IE  SDNREGKNKAV  D VIA   E Q VLSLR VGFSHLL IL+
Subjt:  MLAEERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILL
KAG6600651.1 hypothetical protein SDJN03_05884, partial [Cucurbita argyrosperma subsp. sororia]4.7e-2081.69Show/hide
Query:  EERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILLSLRSSERRRGTLHLK
        EERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRIL          G +H+K
Subjt:  EERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILLSLRSSERRRGTLHLK
KAG7011932.1 hypothetical protein SDJN02_26840, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1166.15Show/hide
Query:  MLAEERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILLSLRSSE
        +LAEE RT NSY+ EI S NREGKN AVA D VIA   E QLVLSLRPVGFSHLL IL+ + + +
Subjt:  MLAEERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILLSLRSSE
KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-1174.58Show/hide
Query:  MLAEERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILL
        +LAEE RTTNSY+IE  SDNREGKNKAV  D VIA   E Q VLSLR VGFSHLL ILL
Subjt:  MLAEERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILL
KAG7031288.1 hypothetical protein SDJN02_05328, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-39100Show/hide
Query:  MLAEERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILLSLRSSERRRGTLHLKRNPIDLKRCSNQAK
        MLAEERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILLSLRSSERRRGTLHLKRNPIDLKRCSNQAK
Subjt:  MLAEERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILLSLRSSERRRGTLHLKRNPIDLKRCSNQAK
TrEMBL top hitse value%identityAlignment
A0A6J1IL14 uncharacterized protein LOC111478006 isoform X11.2e-0569.57Show/hide
Query:  EERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPV
        EER+TTNS +IEIG+DN EGKN+ VA D VIA  KE Q VLSLR V
Subjt:  EERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPV
A0A6J1ING1 uncharacterized protein LOC111478006 isoform X24.2e-0664.71Show/hide
Query:  EERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHL
        EER+TTNS +IEIG+DN EGKN+ VA D VIA  KE Q VLSLR  G  H+
Subjt:  EERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCAGAAGAGAGGAGGACGACGAACTCTTATATCATTGAGATTGGTTCCGATAACAGAGAGGGGAAGAACAAAGCAGTTGCTCATGATGGAGTGATTGCTCAGGA
GAAAGAAAATCAGTTGGTCCTGTCATTGAGGCCGGTGGGATTTTCGCATCTGCTAAGAATACTGCTTTCATTGAGATCAAGTGAAAGACGAAGAGGAACACTCCATCTCA
AGAGGAACCCAATTGACCTAAAAAGGTGCTCCAATCAAGCAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCAGAAGAGAGGAGGACGACGAACTCTTATATCATTGAGATTGGTTCCGATAACAGAGAGGGGAAGAACAAAGCAGTTGCTCATGATGGAGTGATTGCTCAGGA
GAAAGAAAATCAGTTGGTCCTGTCATTGAGGCCGGTGGGATTTTCGCATCTGCTAAGAATACTGCTTTCATTGAGATCAAGTGAAAGACGAAGAGGAACACTCCATCTCA
AGAGGAACCCAATTGACCTAAAAAGGTGCTCCAATCAAGCAAAATAA
Protein sequenceShow/hide protein sequence
MLAEERRTTNSYIIEIGSDNREGKNKAVAHDGVIAQEKENQLVLSLRPVGFSHLLRILLSLRSSERRRGTLHLKRNPIDLKRCSNQAK