; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14228 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14228
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description50S ribosomal protein L29, chloroplastic-like
Genome locationCarg_Chr04:4460021..4461912
RNA-Seq ExpressionCarg14228
SyntenyCarg14228
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001854 - Ribosomal protein L29/L35
IPR036049 - Ribosomal protein L29/L35 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577307.1 50S ribosomal protein L29, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]5.0e-7192.26Show/hide
Query:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV+ P+KFLSSTSKSSFNG QIRFPFSFRVPPK A TGGRNS VVMMAKREEELK+IR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022941582.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita moschata]1.2e-77100Show/hide
Query:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
        MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_022977189.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita maxima]2.7e-7799.4Show/hide
Query:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_023531622.1 50S ribosomal protein L29, chloroplastic-like [Cucurbita pepo subsp. pepo]6.1e-7799.4Show/hide
Query:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
        MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNS VVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA

XP_038903244.1 50S ribosomal protein L29, chloroplastic [Benincasa hispida]3.8e-7192.86Show/hide
Query:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
        MINLSIASPS+VS P K L+STSKSSFNG QIRFPFSFRVPPKTA TGGRNSSVVMMAKREEELKEIR K+TEEI EEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA

TrEMBL top hitse value%identityAlignment
A0A0A0KVL7 Uncharacterized protein1.9e-6890Show/hide
Query:  MINLSIAS-PSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTG-GRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNE
        MINLSIAS PS++  PSKFL+STSKSSFN  QIRFPFSFR+PPKTA+TG GRNSSVVMMAKRE+ELK+IR+KTTEEINEEVIDLKGELLMLRLQKSARNE
Subjt:  MINLSIAS-PSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTG-GRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNE

Query:  FKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
        FKSSEFRRMRKRI+RMLTV+REREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  FKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1EMX4 50S ribosomal protein L29, chloroplastic-like3.3e-6890.24Show/hide
Query:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSV+ P+KFLSSTSKSSFNG QIRFPFS RVPPK A TGGRNS VVMMAKREEELK+IR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEE AAE++
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEA

A0A6J1FMW5 50S ribosomal protein L29, chloroplastic-like6.0e-78100Show/hide
Query:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
        MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1IQR3 50S ribosomal protein L29, chloroplastic-like1.3e-7799.4Show/hide
Query:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
        M+NLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA

A0A6J1JCM6 50S ribosomal protein L29, chloroplastic-like1.2e-7091.67Show/hide
Query:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK
        MINLSIASPSSV+ P+KFLSSTSKSSFNG QIRFPFSFRVPPK A  GGRNS VVMMAKREEELK+IR KTTEEINEEV+DLKGELLMLRLQKSARNEFK
Subjt:  MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFK

Query:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA
        SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWK+SIVVRPPPSLKKLREEE AAE AEKSA
Subjt:  SSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA

SwissProt top hitse value%identityAlignment
B8HMR2 50S ribosomal protein L297.2e-0431.75Show/hide
Query:  ELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEE
        ++K++   +  E+  +++DLK +L  LRLQK+ R E K  +F+ +R ++A+++T++R+R++ +
Subjt:  ELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEE

P82248 50S ribosomal protein L29, chloroplastic3.1e-3964.19Show/hide
Query:  SKSSFNGRQ---IRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKR
        +KSSF+G +   +    S R+  +T       SSVV+M K+E+ELKE+RTKT E++NEE++ LKGEL MLRLQ+SAR  FK S+F RMRKR+ARMLTVKR
Subjt:  SKSSFNGRQ---IRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKR

Query:  EREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKS
        EREIE+GVGKRLSRKLD+ WKRSIVVRPPPSLKKL+E+  A  EAEK+
Subjt:  EREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKS

Q49ZG0 50S ribosomal protein L292.5e-0448.39Show/hide
Query:  KEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEG
        KEIR  TT EI E++   K EL  LR Q +     +++  R +RK IAR+ TV REREIE+G
Subjt:  KEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEG

Q9FJP3 50S ribosomal protein L29, chloroplastic5.8e-4667.26Show/hide
Query:  MINLSIASPSSVS-FPSKFLSSTS-KSSFNGRQIRFPFSFRVP-PKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARN
        M++LSIA+P + + F     S+TS  SSF+G +I+   S RVP   T S+     SVVMM+KRE ELKEIR+KTTE++ EEV+DLKGEL MLRLQKSARN
Subjt:  MINLSIASPSSVS-FPSKFLSSTS-KSSFNGRQIRFPFSFRVP-PKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARN

Query:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAE
        EFKSS+FRRM+K++ARMLTVKREREI+EG+ KRLSRKLDR+WK+SIV RPPPSLKKL+EEEAA E AE
Subjt:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAE

Q9SWI6 50S ribosomal protein L29, chloroplastic2.7e-3574.07Show/hide
Query:  RNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPP
        R +++V MAKRE+EL+EIR  TTE++ EEV+DLKGEL +LRL++SAR EFK+SEF RMRKRIARMLTVKREREIE+G+ KRLSRKLDRKWK+SIVVRPPP
Subjt:  RNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPP

Query:  SLKKLREE
        SL+  +EE
Subjt:  SLKKLREE

Arabidopsis top hitse value%identityAlignment
AT5G65220.1 Ribosomal L29 family protein4.1e-4767.26Show/hide
Query:  MINLSIASPSSVS-FPSKFLSSTS-KSSFNGRQIRFPFSFRVP-PKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARN
        M++LSIA+P + + F     S+TS  SSF+G +I+   S RVP   T S+     SVVMM+KRE ELKEIR+KTTE++ EEV+DLKGEL MLRLQKSARN
Subjt:  MINLSIASPSSVS-FPSKFLSSTS-KSSFNGRQIRFPFSFRVP-PKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARN

Query:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAE
        EFKSS+FRRM+K++ARMLTVKREREI+EG+ KRLSRKLDR+WK+SIV RPPPSLKKL+EEEAA E AE
Subjt:  EFKSSEFRRMRKRIARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAACCTTTCAATTGCTTCGCCTTCGAGCGTTTCGTTCCCTTCTAAATTTCTTAGCTCGACCTCCAAATCCTCCTTCAATGGCCGTCAAATCCGGTTCCCATTTTC
GTTTCGCGTTCCTCCTAAAACAGCATCTACCGGAGGCCGCAATTCGTCGGTGGTAATGATGGCGAAGAGGGAGGAGGAGTTGAAGGAAATCAGAACGAAAACTACTGAGG
AAATAAACGAAGAGGTCATCGATCTTAAGGGTGAACTTCTTATGCTTCGGCTTCAGAAATCAGCTCGCAATGAGTTTAAGTCCAGCGAATTCCGCCGCATGCGCAAACGG
ATTGCTCGGATGCTAACCGTGAAACGTGAAAGAGAGATTGAAGAGGGAGTGGGCAAAAGGCTGTCAAGAAAGCTAGACAGAAAGTGGAAGAGAAGTATTGTGGTCAGACC
ACCTCCATCTTTGAAGAAGTTGCGAGAGGAAGAAGCAGCCGCTGAAGAAGCTGAGAAATCTGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAACCTTTCAATTGCTTCGCCTTCGAGCGTTTCGTTCCCTTCTAAATTTCTTAGCTCGACCTCCAAATCCTCCTTCAATGGCCGTCAAATCCGGTTCCCATTTTC
GTTTCGCGTTCCTCCTAAAACAGCATCTACCGGAGGCCGCAATTCGTCGGTGGTAATGATGGCGAAGAGGGAGGAGGAGTTGAAGGAAATCAGAACGAAAACTACTGAGG
AAATAAACGAAGAGGTCATCGATCTTAAGGGTGAACTTCTTATGCTTCGGCTTCAGAAATCAGCTCGCAATGAGTTTAAGTCCAGCGAATTCCGCCGCATGCGCAAACGG
ATTGCTCGGATGCTAACCGTGAAACGTGAAAGAGAGATTGAAGAGGGAGTGGGCAAAAGGCTGTCAAGAAAGCTAGACAGAAAGTGGAAGAGAAGTATTGTGGTCAGACC
ACCTCCATCTTTGAAGAAGTTGCGAGAGGAAGAAGCAGCCGCTGAAGAAGCTGAGAAATCTGCTTGA
Protein sequenceShow/hide protein sequence
MINLSIASPSSVSFPSKFLSSTSKSSFNGRQIRFPFSFRVPPKTASTGGRNSSVVMMAKREEELKEIRTKTTEEINEEVIDLKGELLMLRLQKSARNEFKSSEFRRMRKR
IARMLTVKREREIEEGVGKRLSRKLDRKWKRSIVVRPPPSLKKLREEEAAAEEAEKSA