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Carg14230 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14230
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:4463395..4466510
RNA-Seq ExpressionCarg14230
SyntenyCarg14230
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031297.1 hypothetical protein SDJN02_05337, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-134100Show/hide
Query:  MTCEESSSAVGDRVNFGFFFEFLSSCLLWMLLSSAPTVFDELPFRTNVEAFFCSFGRNGMFVSELQNGDSIMTTTSNYLVNNDAMLYHEMVIILVNHHAS
        MTCEESSSAVGDRVNFGFFFEFLSSCLLWMLLSSAPTVFDELPFRTNVEAFFCSFGRNGMFVSELQNGDSIMTTTSNYLVNNDAMLYHEMVIILVNHHAS
Subjt:  MTCEESSSAVGDRVNFGFFFEFLSSCLLWMLLSSAPTVFDELPFRTNVEAFFCSFGRNGMFVSELQNGDSIMTTTSNYLVNNDAMLYHEMVIILVNHHAS

Query:  IQASLIYTTIVSTKPPLIIHNTRRKSKGVHRKRHQDEDKTTREAMTLARAHSSVPNLLIANLRIFAKYLSGKVKDLMVVLSNFRLAKGSRTFKNEERTGA
        IQASLIYTTIVSTKPPLIIHNTRRKSKGVHRKRHQDEDKTTREAMTLARAHSSVPNLLIANLRIFAKYLSGKVKDLMVVLSNFRLAKGSRTFKNEERTGA
Subjt:  IQASLIYTTIVSTKPPLIIHNTRRKSKGVHRKRHQDEDKTTREAMTLARAHSSVPNLLIANLRIFAKYLSGKVKDLMVVLSNFRLAKGSRTFKNEERTGA

Query:  TTMRIKNRTNIDQAPTKQEPDQAKSSKNRKIAIMISSGSENGIDIPSFRLTTIT
        TTMRIKNRTNIDQAPTKQEPDQAKSSKNRKIAIMISSGSENGIDIPSFRLTTIT
Subjt:  TTMRIKNRTNIDQAPTKQEPDQAKSSKNRKIAIMISSGSENGIDIPSFRLTTIT
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTTGTGAAGAGAGCTCTAGCGCAGTTGGAGATCGTGTGAACTTCGGGTTTTTCTTTGAATTCCTTTCTTCATGTCTTCTGTGGATGTTGTTATCCTCTGCCCCGAC
AGTGTTTGATGAATTACCTTTTAGGACGAATGTGGAGGCATTCTTTTGTTCCTTCGGAAGAAATGGCATGTTTGTGTCTGAGTTACAAAATGGAGATTCGATTATGACAA
CCACTTCGAATTATTTGGTTAATAATGATGCAATGTTGTATCATGAAATGGTCATAATTTTAGTGAATCATCACGCAAGTATTCAAGCATCACTTATTTATACAACTATT
GTTTCAACAAAACCTCCGTTGATAATACACAATACAAGAAGAAAATCCAAGGGAGTACACAGGAAAAGACACCAAGATGAGGACAAAACCACTCGAGAAGCAATGACCCT
GGCAAGAGCCCATTCGTCCGTCCCCAACTTGTTGATTGCCAACCTAAGGATTTTTGCGAAGTATCTTTCTGGGAAGGTCAAAGATTTGATGGTTGTTCTCAGTAACTTCA
GATTGGCTAAAGGTAGCCGAACATTTAAGAATGAAGAACGAACTGGTGCCACCACAATGAGAATTAAAAATAGAACAAATATAGATCAAGCACCAACCAAACAGGAACCC
GATCAAGCTAAAAGTTCAAAAAACAGAAAGATCGCAATCATGATCTCCAGCGGATCAGAAAATGGAATCGACATACCTTCATTTCGATTAACGACGATAACGTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTTGTGAAGAGAGCTCTAGCGCAGTTGGAGATCGTGTGAACTTCGGGTTTTTCTTTGAATTCCTTTCTTCATGTCTTCTGTGGATGTTGTTATCCTCTGCCCCGAC
AGTGTTTGATGAATTACCTTTTAGGACGAATGTGGAGGCATTCTTTTGTTCCTTCGGAAGAAATGGCATGTTTGTGTCTGAGTTACAAAATGGAGATTCGATTATGACAA
CCACTTCGAATTATTTGGTTAATAATGATGCAATGTTGTATCATGAAATGGTCATAATTTTAGTGAATCATCACGCAAGTATTCAAGCATCACTTATTTATACAACTATT
GTTTCAACAAAACCTCCGTTGATAATACACAATACAAGAAGAAAATCCAAGGGAGTACACAGGAAAAGACACCAAGATGAGGACAAAACCACTCGAGAAGCAATGACCCT
GGCAAGAGCCCATTCGTCCGTCCCCAACTTGTTGATTGCCAACCTAAGGATTTTTGCGAAGTATCTTTCTGGGAAGGTCAAAGATTTGATGGTTGTTCTCAGTAACTTCA
GATTGGCTAAAGGTAGCCGAACATTTAAGAATGAAGAACGAACTGGTGCCACCACAATGAGAATTAAAAATAGAACAAATATAGATCAAGCACCAACCAAACAGGAACCC
GATCAAGCTAAAAGTTCAAAAAACAGAAAGATCGCAATCATGATCTCCAGCGGATCAGAAAATGGAATCGACATACCTTCATTTCGATTAACGACGATAACGTAG
Protein sequenceShow/hide protein sequence
MTCEESSSAVGDRVNFGFFFEFLSSCLLWMLLSSAPTVFDELPFRTNVEAFFCSFGRNGMFVSELQNGDSIMTTTSNYLVNNDAMLYHEMVIILVNHHASIQASLIYTTI
VSTKPPLIIHNTRRKSKGVHRKRHQDEDKTTREAMTLARAHSSVPNLLIANLRIFAKYLSGKVKDLMVVLSNFRLAKGSRTFKNEERTGATTMRIKNRTNIDQAPTKQEP
DQAKSSKNRKIAIMISSGSENGIDIPSFRLTTIT