; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14261 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14261
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSignal peptidase complex subunit 1
Genome locationCarg_Chr04:10679505..10681642
RNA-Seq ExpressionCarg14261
SyntenyCarg14261
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0006465 - signal peptide processing (biological process)
GO:0045047 - protein targeting to ER (biological process)
GO:0005787 - signal peptidase complex (cellular component)
GO:0015934 - large ribosomal subunit (cellular component)
GO:0030176 - integral component of endoplasmic reticulum membrane (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR009542 - Signal peptidase complex subunit Spc1/SPCS1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7032360.1 putative signal peptidase complex subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-45100Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTKNFTL
        MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTKNFTL
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTKNFTL

XP_022956722.1 probable signal peptidase complex subunit 1 [Cucurbita moschata]5.3e-4196.74Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKLAEQMMQIMLVAFAVVAF  GYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDP VAEKYPKPQPQEPVALKKKPTK
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

XP_022998775.1 probable signal peptidase complex subunit 1 [Cucurbita maxima]3.4e-4095.65Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKLAEQMMQIMLVAFAVVAF  GYVMESFRMMMLVYA GVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPV LKKKPTK
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

XP_023549840.1 probable signal peptidase complex subunit 1 [Cucurbita pepo subsp. pepo]3.1e-4196.74Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKLAEQMMQIMLVAFAVVAF  GYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPV LKKKPTK
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

XP_038882954.1 probable signal peptidase complex subunit 1 [Benincasa hispida]1.2e-3789.13Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKLAEQ+MQIMLVAFAVVAF  GY+M SFRMM+LVYAGGVVLTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPV LKKK  K
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

TrEMBL top hitse value%identityAlignment
A0A0A0KS09 Uncharacterized protein7.7e-3888.04Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKLAEQ+MQ+MLVAFAVVAF  GYVM SFR+M+LVYAGGV LTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPV LKKKP K
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

A0A1S3BET6 probable signal peptidase complex subunit 11.0e-3789.13Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKLAEQ+MQIMLVAFAVVAF  GYVM SFRMM+LVYAGGV LTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPV  KKKP K
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

A0A5D3CZV6 Putative signal peptidase complex subunit 11.0e-3789.13Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKLAEQ+MQIMLVAFAVVAF  GYVM SFRMM+LVYAGGV LTTLITVPNWPFFNRHPLKWLDPS+AEKYPKPQPQEPV  KKKP K
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

A0A6J1GX63 probable signal peptidase complex subunit 12.6e-4196.74Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKLAEQMMQIMLVAFAVVAF  GYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDP VAEKYPKPQPQEPVALKKKPTK
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

A0A6J1KDF1 probable signal peptidase complex subunit 11.7e-4095.65Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKLAEQMMQIMLVAFAVVAF  GYVMESFRMMMLVYA GVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPV LKKKPTK
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

SwissProt top hitse value%identityAlignment
B0FWK4 Signal peptidase complex subunit 12.7e-1144.3Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP
        MD++GQKLAEQM Q +++  A+V F  GYV E F   + +   G   + L+T+P WP + RHPLKWL   D    +K P
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP

Q3T134 Signal peptidase complex subunit 12.0e-1144.3Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP
        MD++GQKLAEQM Q +++  A+V F  GY+ E F   + +   G   + L+T+P WP + RHPLKWL   D S  +K P
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP

Q944J0 Probable signal peptidase complex subunit 12.2e-2971.74Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKL EQ+MQI+LV   VVA  +GY  ESFR MML+YAGGVVLTTL+TVPNWPF+N HPLKWLDPS AEK+PKP+    VA KKK +K
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

Q9D958 Signal peptidase complex subunit 13.5e-1147.76Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWL
        MD++GQKLAEQM Q +++  A+V F  GYV E F   + +   G   + L+T+P WP + RHPLKWL
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWL

Q9Y6A9 Signal peptidase complex subunit 13.5e-1144.3Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP
        MD++GQKLAEQM Q +++  A+V F  GYV E F   + +   G   + L+T+P WP + RHPLKWL   + S  +K P
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWL---DPSVAEKYP

Arabidopsis top hitse value%identityAlignment
AT2G22425.1 Microsomal signal peptidase 12 kDa subunit (SPC12)1.5e-3071.74Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKL EQ+MQI+LV   VVA  +GY  ESFR MML+YAGGVVLTTL+TVPNWPF+N HPLKWLDPS AEK+PKP+    VA KKK +K
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

AT2G22425.2 Microsomal signal peptidase 12 kDa subunit (SPC12)1.5e-3071.74Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKL EQ+MQI+LV   VVA  +GY  ESFR MML+YAGGVVLTTL+TVPNWPF+N HPLKWLDPS AEK+PKP+    VA KKK +K
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK

AT4G40042.1 Microsomal signal peptidase 12 kDa subunit (SPC12)1.5e-3070.65Show/hide
Query:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK
        MDWQGQKLAEQ+MQI+L+  AVV+F +GY   SFRMMML+YAGGVVLTTLIT+PNWP FNRH LKWLDPS AEK+PKPQ     + KK  +K
Subjt:  MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATTGGCAAGGGCAAAAGCTAGCGGAGCAGATGATGCAGATTATGTTGGTTGCTTTTGCGGTGGTGGCCTTTTCGATAGGCTATGTTATGGAATCGTTTCGGATGAT
GATGTTGGTTTATGCTGGCGGTGTGGTTCTTACCACACTAATCACTGTTCCGAATTGGCCTTTCTTTAATCGCCACCCCCTCAAATGGCTGGATCCTAGCGTGGCTGAAA
AATACCCTAAGCCGCAGCCGCAAGAGCCGGTGGCTTTGAAGAAGAAACCGACGAAGAACTTTACATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATTGGCAAGGGCAAAAGCTAGCGGAGCAGATGATGCAGATTATGTTGGTTGCTTTTGCGGTGGTGGCCTTTTCGATAGGCTATGTTATGGAATCGTTTCGGATGAT
GATGTTGGTTTATGCTGGCGGTGTGGTTCTTACCACACTAATCACTGTTCCGAATTGGCCTTTCTTTAATCGCCACCCCCTCAAATGGCTGGATCCTAGCGTGGCTGAAA
AATACCCTAAGCCGCAGCCGCAAGAGCCGGTGGCTTTGAAGAAGAAACCGACGAAGAACTTTACATTGTAA
Protein sequenceShow/hide protein sequence
MDWQGQKLAEQMMQIMLVAFAVVAFSIGYVMESFRMMMLVYAGGVVLTTLITVPNWPFFNRHPLKWLDPSVAEKYPKPQPQEPVALKKKPTKNFTL