; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14262 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14262
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionnuclear pore complex protein NUP54-like
Genome locationCarg_Chr04:10677127..10678365
RNA-Seq ExpressionCarg14262
SyntenyCarg14262
Gene Ontology termsGO:0006607 - NLS-bearing protein import into nucleus (biological process)
GO:0006999 - nuclear pore organization (biological process)
GO:0036228 - protein localization to nuclear inner membrane (biological process)
GO:0044613 - nuclear pore central transport channel (cellular component)
GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domainsIPR024864 - Nucleoporin Nup54/Nup57/Nup44
IPR025712 - Nucleoporin Nup54, alpha-helical domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601593.1 Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. sororia]2.4e-12186.74Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA
        MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFG                                    TPQSNPAFSTLASTPA
Subjt:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA

Query:  FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR
        FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR
Subjt:  FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR

Query:  DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV
        DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLK+
Subjt:  DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV

KAG7032359.1 Nuclear pore complex protein NUP54, partial [Cucurbita argyrosperma subsp. argyrosperma]7.6e-152100Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA
        MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA
Subjt:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA

Query:  FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR
        FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR
Subjt:  FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR

Query:  DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKVFQITSTCA
        DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKVFQITSTCA
Subjt:  DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKVFQITSTCA

XP_022957465.1 nuclear pore complex protein NUP54-like [Cucurbita moschata]7.9e-11784.23Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA
        MFGAQQSSSAFGTPQSTPAF TLQSTPAF TLQSTPAFGTPQTTP FGTPQ+T                                    PAFSTLASTPA
Subjt:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA

Query:  FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR
        FGT SASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQ+QQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPF NAQLITQMAPVAPLPFCLADR
Subjt:  FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR

Query:  DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV
        DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLK+
Subjt:  DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV

XP_022998033.1 nuclear pore complex protein NUP54-like [Cucurbita maxima]1.6e-10989.26Show/hide
Query:  FGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFST
        FG  Q++ AFGTPQ+TPAFGTPQTTPAFGTPQS PAF TPQS PAF TP         +STPAFGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFST
Subjt:  FGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFST

Query:  PFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPA
        PFSSQPS    QQQQSPLFQQRGA GFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPA
Subjt:  PFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPA

Query:  GVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV
        GVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLK+
Subjt:  GVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV

XP_023515339.1 nuclear pore complex protein NUP54-like [Cucurbita pepo subsp. pepo]3.6e-11783.51Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA
        MFGAQQSSSAFGTPQSTPAF TL+STPAF TL+STPAFGTPQ+TPAFGTPQ+TPAFGTP                                    ASTPA
Subjt:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA

Query:  FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR
        FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQP Q+QQQQQQSPLFQQRGA GFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR
Subjt:  FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR

Query:  DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV
        DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLK+
Subjt:  DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV

TrEMBL top hitse value%identityAlignment
A0A6J1G105 nuclear pore complex protein NUP545.9e-10285.19Show/hide
Query:  FGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNL-STPAFGTPSTSSFATGFGSSLFS
        FG   ++ AFGTPQ+TPAFGTPQ+TPAFGTPQS PAF TPQS PAF TPQ         STPAFGTPSASPAFGN  STPAFGTPS+SSFATGFGSSLFS
Subjt:  FGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNL-STPAFGTPSTSSFATGFGSSLFS

Query:  TPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP
        TPFSSQPS  QQQQQQSPLFQ   A GFGFQTPFAAPQSSPFPNAQL TQMAPVAPLPF +ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYRAKP
Subjt:  TPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKP

Query:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV
        AGVSD MWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLK+
Subjt:  AGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV

A0A6J1H0M2 nuclear pore complex protein NUP54-like3.8e-11784.23Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA
        MFGAQQSSSAFGTPQSTPAF TLQSTPAF TLQSTPAFGTPQTTP FGTPQ+T                                    PAFSTLASTPA
Subjt:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA

Query:  FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR
        FGT SASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQ+QQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPF NAQLITQMAPVAPLPFCLADR
Subjt:  FGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADR

Query:  DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV
        DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLK+
Subjt:  DIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV

A0A6J1HT18 nuclear pore complex protein NUP543.7e-9686.67Show/hide
Query:  FGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNL-STPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSP
        FG   ++ AFGTPQS P F TPQS PAF TPQS PAF T ASTPAFGTPSASPAFGN  STPAFGTPS+SSFATGFGSSLFSTPFSSQPS  QQQQQQSP
Subjt:  FGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNL-STPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSP

Query:  LFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGM
        LFQ   A GFGFQTPFAAPQSS FPNAQL TQMAPVAPLPF +ADRDIQAIVEAYKDDAGNPKYAFK LLFSVTDPQYRAKPAGVSD MWAEAMAKLEGM
Subjt:  LFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGM

Query:  ESADRERLWPQLVQGFKDLSQRLKV
        ESADRERLWPQLVQGFKDLSQRLK+
Subjt:  ESADRERLWPQLVQGFKDLSQRLKV

A0A6J1KFN7 nuclear pore complex protein NUP54-like7.7e-11089.26Show/hide
Query:  FGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFST
        FG  Q++ AFGTPQ+TPAFGTPQTTPAFGTPQS PAF TPQS PAF TP         +STPAFGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFST
Subjt:  FGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNLSTPAFGTPSTSSFATGFGSSLFST

Query:  PFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPA
        PFSSQPS    QQQQSPLFQQRGA GFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPA
Subjt:  PFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPA

Query:  GVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV
        GVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLK+
Subjt:  GVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV

A0A7J9L8X3 Nup54 domain-containing protein1.6e-9973.52Show/hide
Query:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA
        MFGAQ S+SAFGTP STPAF T  STPAF T  STPAFGT  +TPAFG P +TPAFGT  +TPAFG P S PAF TP S PAF TP S PAF T +STPA
Subjt:  MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA

Query:  FGTPSASPAFGN-LSTPAFGTPSTSSFATGF-GSSLFSTPFSSQPSQRQQQQQQSPLFQQ------RGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAP
        FG PS++PAFG   STPAFGTPST SFATGF GSSLFSTPFSS     Q QQQQ+ LFQQ        ++GFGFQT  +A   +PFP+AQL TQMAPVAP
Subjt:  FGTPSASPAFGN-LSTPAFGTPSTSSFATGF-GSSLFSTPFSSQPSQRQQQQQQSPLFQQ------RGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAP

Query:  LPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV
        LPF LADRDIQAIV+AYK++AGNPKYAFKHLLFSV +PQ+R KPAGVSD MWAEAMAKLEGMES+DRERLWPQLVQGFKDLSQRLK+
Subjt:  LPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKV

SwissProt top hitse value%identityAlignment
F4ID16 Nuclear pore complex protein NUP98B1.7e-0539.8Show/hide
Query:  FGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQT----TPAFGTPQSNPAFSTPQSNP-AFSTPQSNPAF--ST
        FGAQ  SS FG   ST  F   Q++  F    S  AFG+  +T AFG   +TP+FG+  +    T  FG  Q +   STPQS+P   +T QS PAF  ST
Subjt:  FGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQT----TPAFGTPQSNPAFSTPQSNP-AFSTPQSNPAF--ST

Query:  LASTPAFGTPSASPAFGNLSTPAFGTPSTSSF------------ATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFG-FQTPFAAPQSSP
          S+  FG  S +PAFG  STPAFG  +TS F             TGFG S  STP     S        +P F       FG   TP     SSP
Subjt:  LASTPAFGTPSASPAFGNLSTPAFGTPSTSSF------------ATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFG-FQTPFAAPQSSP

O13936 Transcription elongation factor spt52.5e-0433.33Show/hide
Query:  TPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGN-LST
        TPA A    TPA+ T   TPA+ +   TPA+ +   TPA+ +   TPA+      PA+++    PA++     PA+++ A TPA+   + +P++ N   T
Subjt:  TPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGN-LST

Query:  PAFGTPSTSSFATGFGSSLFSTP
        PA+    T   A G  +S   TP
Subjt:  PAFGTPSTSSFATGFGSSLFSTP

Q8GYF7 Nuclear pore complex protein NUP541.2e-7068.84Show/hide
Query:  FSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNLSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQRQQQQQQ----SPLFQQRGAAGFGFQT
        F TP S+P+F TP S PAF T  S+PAFGTPSA        TPAFGTPS  SF++ GFGSSLFS+PFSSQ  Q+QQQQQQ    S LFQQ+ ++ FGFQ+
Subjt:  FSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNLSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQRQQQQQQ----SPLFQQRGAAGFGFQT

Query:  PF----AAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWP
        PF       Q +PFPNAQL TQMAPVAP+P+ LADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KPA VSD MWAEAM+KLEGM+S +RERLWP
Subjt:  PF----AAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWP

Query:  QLVQGFKDLSQRLKV
        QLVQGFKDLSQRLK+
Subjt:  QLVQGFKDLSQRLKV

Q9VDV3 Nuclear pore complex protein Nup582.2e-1639.78Show/hide
Query:  FGAQQSSSAFGTPQSTPAF-ATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA
        FGA  ++ AFG P STP F AT  + PAF T  +TPAFG P  T AFG P  TPAFG    TPAFG P + PAF  P +  AF  P +  AF   AST A
Subjt:  FGAQQSSSAFGTPQSTPAF-ATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPA

Query:  FGTPSASPAFG------NLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQ--QQQQSPLFQQRGAAGFGFQTPFAAPQSSPF
            + +PA G      + +TPA   P+T+  A GFG++  +T  ++ P+           P  Q   AA   F T      + PF
Subjt:  FGTPSASPAFG------NLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQ--QQQQSPLFQQRGAAGFGFQTPFAAPQSSPF

Arabidopsis top hitse value%identityAlignment
AT1G24310.1 unknown protein8.3e-7268.84Show/hide
Query:  FSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNLSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQRQQQQQQ----SPLFQQRGAAGFGFQT
        F TP S+P+F TP S PAF T  S+PAFGTPSA        TPAFGTPS  SF++ GFGSSLFS+PFSSQ  Q+QQQQQQ    S LFQQ+ ++ FGFQ+
Subjt:  FSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAFGNLSTPAFGTPSTSSFAT-GFGSSLFSTPFSSQPSQRQQQQQQ----SPLFQQRGAAGFGFQT

Query:  PF----AAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWP
        PF       Q +PFPNAQL TQMAPVAP+P+ LADRD+QAI+EAYK+D  NPKYAF+HLLFSVT+PQYR KPA VSD MWAEAM+KLEGM+S +RERLWP
Subjt:  PF----AAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAFKHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWP

Query:  QLVQGFKDLSQRLKV
        QLVQGFKDLSQRLK+
Subjt:  QLVQGFKDLSQRLKV

AT1G59660.1 Nucleoporin autopeptidase1.2e-0639.8Show/hide
Query:  FGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQT----TPAFGTPQSNPAFSTPQSNP-AFSTPQSNPAF--ST
        FGAQ  SS FG   ST  F   Q++  F    S  AFG+  +T AFG   +TP+FG+  +    T  FG  Q +   STPQS+P   +T QS PAF  ST
Subjt:  FGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQT----TPAFGTPQSNPAFSTPQSNP-AFSTPQSNPAF--ST

Query:  LASTPAFGTPSASPAFGNLSTPAFGTPSTSSF------------ATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFG-FQTPFAAPQSSP
          S+  FG  S +PAFG  STPAFG  +TS F             TGFG S  STP     S        +P F       FG   TP     SSP
Subjt:  LASTPAFGTPSASPAFGNLSTPAFGTPSTSSF------------ATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFG-FQTPFAAPQSSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCGGAGCTCAACAGTCCTCCTCCGCCTTCGGCACTCCACAATCAACTCCGGCCTTTGCCACTCTGCAATCAACTCCGGCCTTTGCCACTCTGCAATCAACTCCGGC
CTTTGGCACTCCGCAGACAACTCCGGCCTTTGGCACTCCGCAGACAACTCCGGCCTTTGGCACTCCGCAGACAACTCCGGCATTTGGCACTCCACAATCGAATCCAGCAT
TTAGCACTCCACAATCGAATCCAGCATTTAGCACTCCACAATCGAATCCAGCATTTAGCACGCTGGCGTCCACTCCTGCCTTCGGAACTCCATCGGCATCTCCCGCATTC
GGAAACCTTTCAACTCCTGCCTTCGGAACTCCATCTACATCGTCTTTTGCCACCGGCTTCGGTTCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCACAACGGCA
ACAGCAGCAGCAGCAATCGCCGCTGTTTCAGCAGCGAGGCGCCGCAGGATTCGGATTCCAGACTCCGTTTGCAGCGCCTCAGTCCAGTCCATTTCCAAATGCTCAACTGA
TCACTCAGATGGCGCCGGTGGCACCGCTTCCTTTCTGCCTGGCTGATCGAGATATTCAAGCAATTGTTGAGGCATACAAGGACGACGCAGGAAACCCTAAGTATGCTTTC
AAGCATTTGTTGTTCAGTGTAACTGATCCTCAATATAGGGCGAAGCCTGCAGGTGTATCGGATACAATGTGGGCTGAGGCAATGGCAAAACTAGAAGGCATGGAAAGTGC
GGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGGTATTTCAAATTACTTCCACATGTGCGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTCGGAGCTCAACAGTCCTCCTCCGCCTTCGGCACTCCACAATCAACTCCGGCCTTTGCCACTCTGCAATCAACTCCGGCCTTTGCCACTCTGCAATCAACTCCGGC
CTTTGGCACTCCGCAGACAACTCCGGCCTTTGGCACTCCGCAGACAACTCCGGCCTTTGGCACTCCGCAGACAACTCCGGCATTTGGCACTCCACAATCGAATCCAGCAT
TTAGCACTCCACAATCGAATCCAGCATTTAGCACTCCACAATCGAATCCAGCATTTAGCACGCTGGCGTCCACTCCTGCCTTCGGAACTCCATCGGCATCTCCCGCATTC
GGAAACCTTTCAACTCCTGCCTTCGGAACTCCATCTACATCGTCTTTTGCCACCGGCTTCGGTTCGTCTCTCTTCTCCACTCCATTCTCTTCTCAGCCTTCACAACGGCA
ACAGCAGCAGCAGCAATCGCCGCTGTTTCAGCAGCGAGGCGCCGCAGGATTCGGATTCCAGACTCCGTTTGCAGCGCCTCAGTCCAGTCCATTTCCAAATGCTCAACTGA
TCACTCAGATGGCGCCGGTGGCACCGCTTCCTTTCTGCCTGGCTGATCGAGATATTCAAGCAATTGTTGAGGCATACAAGGACGACGCAGGAAACCCTAAGTATGCTTTC
AAGCATTTGTTGTTCAGTGTAACTGATCCTCAATATAGGGCGAAGCCTGCAGGTGTATCGGATACAATGTGGGCTGAGGCAATGGCAAAACTAGAAGGCATGGAAAGTGC
GGATAGAGAGCGATTGTGGCCACAGCTTGTTCAAGGTTTTAAGGATTTATCTCAGCGCTTGAAGGTATTTCAAATTACTTCCACATGTGCGTGA
Protein sequenceShow/hide protein sequence
MFGAQQSSSAFGTPQSTPAFATLQSTPAFATLQSTPAFGTPQTTPAFGTPQTTPAFGTPQTTPAFGTPQSNPAFSTPQSNPAFSTPQSNPAFSTLASTPAFGTPSASPAF
GNLSTPAFGTPSTSSFATGFGSSLFSTPFSSQPSQRQQQQQQSPLFQQRGAAGFGFQTPFAAPQSSPFPNAQLITQMAPVAPLPFCLADRDIQAIVEAYKDDAGNPKYAF
KHLLFSVTDPQYRAKPAGVSDTMWAEAMAKLEGMESADRERLWPQLVQGFKDLSQRLKVFQITSTCA