; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14307 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14307
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-type domain-containing protein
Genome locationCarg_Chr04:10315467..10315886
RNA-Seq ExpressionCarg14307
SyntenyCarg14307
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR011016 - Zinc finger, RING-CH-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044249 - Probable E3 ubiquitin-protein ligase XERICO-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034267.1 putative E3 ubiquitin-protein ligase XERICO [Cucumis melo var. makuwa]4.2e-6390.65Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKN VRSVIQMMSASGN SSSEEE DWENGRERRISITQFK+LGQSF NG TE+   SRCVMAECCVCLC 
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHKACLSKWFDNKH TCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE

KAG6601543.1 putative E3 ubiquitin-protein ligase XERICO, partial [Cucurbita argyrosperma subsp. sororia]5.8e-73100Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE

XP_022957080.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita moschata]5.8e-73100Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE

XP_022984317.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita maxima]2.2e-7298.56Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE DWENGRERRISITQFKSLGQSFNNGGTEKGSASRC+MAECCVCLCG
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE

XP_023523084.1 probable E3 ubiquitin-protein ligase XERICO [Cucurbita pepo subsp. pepo]4.9e-7298.56Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE DWENGRERRISITQFKSLGQSFNNGGTEKGSASRC MAECCVCLCG
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE

TrEMBL top hitse value%identityAlignment
A0A0A0KTI8 RING-type domain-containing protein4.5e-6390.65Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKN VRSVIQMMSASGN SSSEEE DWEN RERRISITQFK+LGQSF NG TE+   SRCVMAECCVCLC 
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHKACLSKWFDNKH TCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE

A0A5A7SYA9 Putative E3 ubiquitin-protein ligase XERICO2.0e-6390.65Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVM+TVMSMAFLKN VRSVIQMMSASGN SSSEEE DWENGRERRISITQFK+LGQSF NG TE+   SRCVMAECCVCLC 
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHKACLSKWFDNKH TCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE

A0A6J1DFU2 probable E3 ubiquitin-protein ligase XERICO6.5e-6289.36Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASG--NPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCL
        MGLSNFPP AEGVLLLPVL+MNTVMSMAFLK+LVRSVIQMMSASG  +PSSSEEE D EN RERRISITQFKSL QSF NGGTE GSASRC+ AECCVCL
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASG--NPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCL

Query:  CGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
        CGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSI+
Subjt:  CGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE

A0A6J1GZI7 probable E3 ubiquitin-protein ligase XERICO2.8e-73100Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE

A0A6J1J1V9 probable E3 ubiquitin-protein ligase XERICO1.1e-7298.56Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG
        MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE DWENGRERRISITQFKSLGQSFNNGGTEKGSASRC+MAECCVCLCG
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCG

Query:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
        FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE
Subjt:  FEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRSIE

SwissProt top hitse value%identityAlignment
Q8LDB8 E3 ubiquitin-protein ligase At1g631707.5e-0748.89Show/hide
Query:  AECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCR
        AECC+CL  +E + E+ EL C H FH  C+ KW    + TCPLC+
Subjt:  AECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCR

Q93Z92 E3 ubiquitin-protein ligase At4g116802.6e-0751.06Show/hide
Query:  AECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHIT--CPLCR
        AECC+CLC +E   E+ EL C H FH  C+ KW    HI   CPLC+
Subjt:  AECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHIT--CPLCR

Q9SI09 Probable E3 ubiquitin-protein ligase XERICO8.0e-1737.16Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE---LDWENGRERR---ISITQFKSLGQSFNNGGTEKGSASRC-----
        MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + ++  S +PSSS      +  EN          + Q +S  + F N        S C     
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE---LDWENGRERR---ISITQFKSLGQSFNNGGTEKGSASRC-----

Query:  VMAECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRS
           EC VCL  F+ D E+++L C H FHK CL KW D  +ITCPLCR+
Subjt:  VMAECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRS

Q9XF92 Brassinosteroid-responsive RING protein 11.3e-0625.9Show/hide
Query:  LLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKS--------------LGQSFNNGGTEKGSASRCVMAECCVCLC
        + LP L + T+  + F++ +V S+ + +  S      E +  W +       I + +S                +   N G +       +   C VCL 
Subjt:  LLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKS--------------LGQSFNNGGTEKGSASRCVMAECCVCLC

Query:  GFEADEEVSEL-SCKHFFHKACLSKWFDNKHITCPLCRS
         FE ++E+  L +C+H FH++CL +W D+   TCPLCR+
Subjt:  GFEADEEVSEL-SCKHFFHKACLSKWFDNKHITCPLCRS

Q9ZU51 E3 ubiquitin-protein ligase RHA2B8.9e-0847.83Show/hide
Query:  AECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRS
        ++C VCL   +  EEV +L C+H FHK CL  W  + +  CPLCRS
Subjt:  AECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRS

Arabidopsis top hitse value%identityAlignment
AT1G24580.1 RING/U-box superfamily protein4.2e-2954.62Show/hide
Query:  MNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCGFEADEEVSEL-SCKHFFHKA
        MNTV+S+  LKN+VRSV Q++++    S   ++   ++   RRISITQFKSL ++      EKG        ECCVCLCGF+ +EEVSEL SCKHFFH+A
Subjt:  MNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCGFEADEEVSEL-SCKHFFHKA

Query:  CLSKWFDNKHITCPLCRSI
        CL  WF N H TCPLCRSI
Subjt:  CLSKWFDNKHITCPLCRSI

AT1G67856.1 RING/U-box superfamily protein2.5e-3453.19Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPS-SSEEELDWENG-RERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCL
        MG+S++P ++EGV  +P+LVMNTV+S++ +KN+VRSV+ M+S+  N + + E++ D E+  R RRISIT F+SL ++       +GS +     +CCVCL
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPS-SSEEELDWENG-RERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCL

Query:  CGFEADEEVSEL-SCKHFFHKACLSKWFDNKHITCPLCRSI
        CGF+ +EEVSEL SCKH+FH ACL KWF N H TCPLCRSI
Subjt:  CGFEADEEVSEL-SCKHFFHKACLSKWFDNKHITCPLCRSI

AT2G04240.1 RING/U-box superfamily protein5.7e-1837.16Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE---LDWENGRERR---ISITQFKSLGQSFNNGGTEKGSASRC-----
        MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + ++  S +PSSS      +  EN          + Q +S  + F N        S C     
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE---LDWENGRERR---ISITQFKSLGQSFNNGGTEKGSASRC-----

Query:  VMAECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRS
           EC VCL  F+ D E+++L C H FHK CL KW D  +ITCPLCR+
Subjt:  VMAECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRS

AT2G04240.2 RING/U-box superfamily protein5.7e-1837.16Show/hide
Query:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE---LDWENGRERR---ISITQFKSLGQSFNNGGTEKGSASRC-----
        MGLS+ P  +EG+L   V+++NT +S++ +K +VRS + ++  S +PSSS      +  EN          + Q +S  + F N        S C     
Subjt:  MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEE---LDWENGRERR---ISITQFKSLGQSFNNGGTEKGSASRC-----

Query:  VMAECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRS
           EC VCL  F+ D E+++L C H FHK CL KW D  +ITCPLCR+
Subjt:  VMAECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRS

AT4G32600.1 RING/U-box superfamily protein1.7e-0944.83Show/hide
Query:  GTEKGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRS
        GT+   A     A CC+CL  +  +EE+ EL C HFFHK C+ KW    + +CPLC+S
Subjt:  GTEKGSASRCVMAECCVCLCGFEADEEVSELSCKHFFHKACLSKWFDNKHITCPLCRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTCTCGAATTTCCCCCCTTCAGCTGAAGGAGTGTTGCTGTTACCTGTTCTTGTGATGAACACTGTAATGTCGATGGCGTTTTTGAAGAACTTGGTGAGATCTGT
GATACAAATGATGAGTGCGAGTGGGAATCCTTCGAGTTCTGAGGAAGAATTGGATTGGGAAAATGGAAGAGAAAGAAGAATCTCAATTACCCAGTTCAAATCTTTGGGTC
AAAGCTTCAATAATGGCGGAACAGAGAAGGGCTCTGCTTCGAGGTGTGTCATGGCAGAGTGCTGTGTTTGTCTTTGTGGGTTTGAAGCTGATGAGGAAGTTAGTGAGTTG
TCTTGCAAGCACTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACATTACTTGCCCTCTTTGTCGTTCCATTGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTCTCGAATTTCCCCCCTTCAGCTGAAGGAGTGTTGCTGTTACCTGTTCTTGTGATGAACACTGTAATGTCGATGGCGTTTTTGAAGAACTTGGTGAGATCTGT
GATACAAATGATGAGTGCGAGTGGGAATCCTTCGAGTTCTGAGGAAGAATTGGATTGGGAAAATGGAAGAGAAAGAAGAATCTCAATTACCCAGTTCAAATCTTTGGGTC
AAAGCTTCAATAATGGCGGAACAGAGAAGGGCTCTGCTTCGAGGTGTGTCATGGCAGAGTGCTGTGTTTGTCTTTGTGGGTTTGAAGCTGATGAGGAAGTTAGTGAGTTG
TCTTGCAAGCACTTTTTTCATAAAGCTTGTCTTTCTAAGTGGTTTGATAATAAGCACATTACTTGCCCTCTTTGTCGTTCCATTGAATAG
Protein sequenceShow/hide protein sequence
MGLSNFPPSAEGVLLLPVLVMNTVMSMAFLKNLVRSVIQMMSASGNPSSSEEELDWENGRERRISITQFKSLGQSFNNGGTEKGSASRCVMAECCVCLCGFEADEEVSEL
SCKHFFHKACLSKWFDNKHITCPLCRSIE