CuGenDBv2

Gene ID	Carg14335
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	hybrid signal transduction histidine kinase L
Genome location	Carg_Chr04:10118685..10119182
RNA-Seq Expression	Carg14335
Synteny	Carg14335
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6601504.1 hypothetical protein SDJN03_06737, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-83

97.63

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Query:  MSDL-QQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFG
        MSDL QQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFG
Subjt:  MSDL-QQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFG

Query:  LDLRNPNGKGKAPSGGNGGTKGNGH---GPNGPNGHSHGFKPFENGQIKHADDHHHEGDFKFKAAAHPV
        LDLRNPNGKGKAPSGGNGGTKGNGH   GPNGPNGHSHGFKPFENGQIKHADDHHHEGDFKFKAAAHPV
Subjt:  LDLRNPNGKGKAPSGGNGGTKGNGH---GPNGPNGHSHGFKPFENGQIKHADDHHHEGDFKFKAAAHPV

KAG7032287.1 hypothetical protein SDJN02_06331, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.9e-86

100

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Query:  MSDLQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGL
        MSDLQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGL
Subjt:  MSDLQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGL

Query:  DLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFENGQIKHADDHHHEGDFKFKAAAHPV
        DLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFENGQIKHADDHHHEGDFKFKAAAHPV
Subjt:  DLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFENGQIKHADDHHHEGDFKFKAAAHPV

XP_022956516.1 uncharacterized protein LOC111458233 [Cucurbita moschata]

1.5e-80

94.71

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Query:  MSDLQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGL
        MSDL  QQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVAC LGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGL
Subjt:  MSDLQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGL

Query:  DLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFEN-----GQIKHADDHHHEGDFKFKAAAHPV
        DLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFEN     GQIKHADD HHEGDFKFKAAAHPV
Subjt:  DLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFEN-----GQIKHADDHHHEGDFKFKAAAHPV

XP_022972292.1 uncharacterized protein LOC111470841 [Cucurbita maxima]

1.9e-78

92.81

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Query:  LQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGLDLR
        + + QQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDK+GDIEFGLDLR
Subjt:  LQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGLDLR

Query:  NPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFEN-----GQIKHADDHHHEGDFKFKAAAHPV
        NPNGKGKA SGGNGGTKGNGHGPN PNGHSHGFKPFEN     GQIKHADDHHHEGDFKFKAAAHPV
Subjt:  NPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFEN-----GQIKHADDHHHEGDFKFKAAAHPV

XP_023543410.1 uncharacterized protein LOC111803300 [Cucurbita pepo subsp. pepo]

5.1e-84

98.8

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Query:  MSDL-QQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFG
        MSDL QQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFG
Subjt:  MSDL-QQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFG

Query:  LDLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFENGQIKHADDHHHEGDFKFKAAAHPV
        LDLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFENGQIKHADD HHEGDFKFKAAAHPV
Subjt:  LDLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFENGQIKHADDHHHEGDFKFKAAAHPV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KTP5 Uncharacterized protein

2.8e-56

71.96

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Query:  MSDLQQ-----QQQQQQPALVYPNTAA--VGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAEN-QRAKPEKTHGGARP-RGKEPKLHPD
        MS+LQQ     QQQQQQPA VYP+TAA   GSQ PP HHSNGSFGAVFIVLAVI+VIS +ACFLGRLCNRR EN QR KPEK+H GARP RGKEPKLHPD
Subjt:  MSDLQQ-----QQQQQQPALVYPNTAA--VGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAEN-QRAKPEKTHGGARP-RGKEPKLHPD

Query:  KEGDIEFGLDLRNPNGKGKAPSGGNGGT---------KGNGHGP---NGPNGHSHGFKPFENG-----QIKHADDHHHEGDFKFKAAAH
        KEGDIEFG DLRNP+GKGK PSGGNG T         KGNG+GP   NGPNGH + FKPFENG     +IKH D  HHEGDF FKAA H
Subjt:  KEGDIEFGLDLRNPNGKGKAPSGGNGGT---------KGNGHGP---NGPNGHSHGFKPFENG-----QIKHADDHHHEGDFKFKAAAH

A0A5A7ST81 Hybrid signal transduction histidine kinase L

3.1e-55

73.18

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Query:  QQQQQQQQPALVYPNTAA--VGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAEN-QRAKPEKTHGGARP-RGKEPKLHPDKEGDIEFGL
        QQQQQQQQPA VYP+TAA   GSQ PPSHHSNGSFGAVFIVLAVI+VIS +ACFLGRLCNRR EN QR KPEK+H GARP RGKEPKLHPDKEGDIEFG 
Subjt:  QQQQQQQQPALVYPNTAA--VGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAEN-QRAKPEKTHGGARP-RGKEPKLHPDKEGDIEFGL

Query:  DLRNPNGKGKAPSGGNGG--------TKGNGHGP---NGPNGHSHGFKPFENG-----QIKHADDHHHEGDFKFKAAAH
        DLRNP+GKGK P GGNG          KGNG+GP   NGPNGH + FKPFENG     +IKH D  HHEGDF FKA  H
Subjt:  DLRNPNGKGKAPSGGNGG--------TKGNGHGP---NGPNGHSHGFKPFENG-----QIKHADDHHHEGDFKFKAAAH

A0A6J1GWS9 uncharacterized protein LOC111458233

7.4e-81

94.71

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Query:  MSDLQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGL
        MSDL  QQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVAC LGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGL
Subjt:  MSDLQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGL

Query:  DLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFEN-----GQIKHADDHHHEGDFKFKAAAHPV
        DLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFEN     GQIKHADD HHEGDFKFKAAAHPV
Subjt:  DLRNPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFEN-----GQIKHADDHHHEGDFKFKAAAHPV

A0A6J1I4F2 uncharacterized protein LOC111470841

9.0e-79

92.81

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Query:  LQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGLDLR
        + + QQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDK+GDIEFGLDLR
Subjt:  LQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGLDLR

Query:  NPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFEN-----GQIKHADDHHHEGDFKFKAAAHPV
        NPNGKGKA SGGNGGTKGNGHGPN PNGHSHGFKPFEN     GQIKHADDHHHEGDFKFKAAAHPV
Subjt:  NPNGKGKAPSGGNGGTKGNGHGPNGPNGHSHGFKPFEN-----GQIKHADDHHHEGDFKFKAAAHPV

E5GBJ1 Uncharacterized protein

3.1e-55

73.18

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Query:  QQQQQQQQPALVYPNTAA--VGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAEN-QRAKPEKTHGGARP-RGKEPKLHPDKEGDIEFGL
        QQQQQQQQPA VYP+TAA   GSQ PPSHHSNGSFGAVFIVLAVI+VIS +ACFLGRLCNRR EN QR KPEK+H GARP RGKEPKLHPDKEGDIEFG 
Subjt:  QQQQQQQQPALVYPNTAA--VGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAEN-QRAKPEKTHGGARP-RGKEPKLHPDKEGDIEFGL

Query:  DLRNPNGKGKAPSGGNGG--------TKGNGHGP---NGPNGHSHGFKPFENG-----QIKHADDHHHEGDFKFKAAAH
        DLRNP+GKGK P GGNG          KGNG+GP   NGPNGH + FKPFENG     +IKH D  HHEGDF FKA  H
Subjt:  DLRNPNGKGKAPSGGNGG--------TKGNGHGP---NGPNGHSHGFKPFENG-----QIKHADDHHHEGDFKFKAAAH

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G23530.1 unknown protein

6.5e-13

37.57

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Query:  QQQQQQQQPALVYPNT-----AAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRR---AENQRAKPEKTHGGARPRGKE---PKLHPDKE
        Q  QQ QQP +VYPN          ++P  S  S+G+FG VFIVLAVI V+S +AC  GRLCNR    A+ Q +K  K    +  + +E    +  P + 
Subjt:  QQQQQQQQPALVYPNT-----AAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRR---AENQRAKPEKTHGGARPRGKE---PKLHPDKE

Query:  GDIEFGLDLRNPNGKGKAPSGGNGGTK----------------GNGHGPNGPN-GHSHGFKPFENGQIKHADDHHHEGDFK
        GD++FG D++ P    K PSG +GG                  G G GP  PN  H+  FK  ENG      DHH +G+ +
Subjt:  GDIEFGLDLRNPNGKGKAPSGGNGGTK----------------GNGHGPNGPN-GHSHGFKPFENGQIKHADDHHHEGDFK

AT1G70470.1 unknown protein

8.0e-11

38.51

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Query:  QQQQQQQPALVYPNTAAVGSQ--PPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNR-------RAENQRAKPEKTHGGARPRGKEPKLHPDKEGDI
        Q Q+ QQP  VYP+T++  S    P S  S+GSFG  FIVLA ILV++ +AC  GRLCNR       +  N+ +K EK         +  +  P + GD+
Subjt:  QQQQQQQPALVYPNTAAVGSQ--PPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNR-------RAENQRAKPEKTHGGARPRGKEPKLHPDKEGDI

Query:  EFGLDLRNPNGKGKAPSGGNGG------TKGNGHGPNGPNGHSHGFKP
        EFG D++ P    K P+G NGG          G G  G  G   G +P
Subjt:  EFGLDLRNPNGKGKAPSGGNGG------TKGNGHGPNGPNGHSHGFKP

AT1G74055.1 unknown protein

3.2e-04

34.38

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Query:  LQQQQQQQ----QPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNR
        +QQQ QQQ    +   +  N   + +   P+H+S+ S G  F V++V+++++ ++CFLGR C R
Subjt:  LQQQQQQQ----QPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNR

Sequences

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CDS sequence

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ATGTCGGACCTTCAACAGCAGCAGCAGCAGCAGCAGCCGGCTTTGGTTTATCCCAACACTGCTGCCGTTGGCAGCCAACCTCCTCCTTCCCACCACTCCAACGGCTCATT
CGGGGCAGTTTTTATAGTTCTTGCCGTTATTCTTGTCATATCCACTGTTGCTTGCTTCCTTGGCCGACTCTGCAACCGGCGAGCTGAAAACCAGAGGGCGAAGCCGGAGA
AAACCCACGGCGGCGCTCGTCCCAGAGGGAAAGAACCCAAATTGCATCCTGACAAAGAAGGAGACATCGAATTTGGATTGGATTTGAGAAACCCAAATGGGAAAGGCAAA
GCCCCATCTGGTGGAAATGGAGGAACCAAAGGCAACGGCCATGGGCCTAATGGGCCTAATGGCCATAGCCATGGGTTCAAACCCTTTGAAAATGGCCAAATCAAGCACGC
GGATGATCATCATCATGAAGGGGATTTCAAGTTCAAAGCAGCAGCTCATCCGGTTTGA

mRNA sequence

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Protein sequence

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MSDLQQQQQQQQPALVYPNTAAVGSQPPPSHHSNGSFGAVFIVLAVILVISTVACFLGRLCNRRAENQRAKPEKTHGGARPRGKEPKLHPDKEGDIEFGLDLRNPNGKGK
APSGGNGGTKGNGHGPNGPNGHSHGFKPFENGQIKHADDHHHEGDFKFKAAAHPV

Carg14335 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome