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Carg14393 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14393
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRNA-binding protein
Genome locationCarg_Chr04:9814720..9818536
RNA-Seq ExpressionCarg14393
SyntenyCarg14393
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601448.1 Galactoside 2-alpha-L-fucosyltransferase, partial [Cucurbita argyrosperma subsp. sororia]4.9e-9999.47Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYV+KFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
KAG7032230.1 hypothetical protein SDJN02_06273 [Cucurbita argyrosperma subsp. argyrosperma]1.7e-99100Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
XP_022151151.1 uncharacterized protein LOC111019147 [Momordica charantia]1.5e-9595.21Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGTIKTI+LPEDVYV+KFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVANMEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
XP_022957544.1 uncharacterized protein LOC111458914 [Cucurbita moschata]4.9e-9999.47Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYV+KFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
XP_022996766.1 uncharacterized protein LOC111491881 [Cucurbita maxima]7.1e-9897.88Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL+RTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDG +KTITLPEDVYV+KFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
TrEMBL top hitse value%identityAlignment
A0A0A0KQQ3 Uncharacterized protein1.5e-8588.65Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLT+TRKLVKGLAKAEP+WLKAMEQAPPP+FPR+DGTIKTITLPEDVYV+KFF+KHPDS Y DAIKFC F+PPPARIF  RVLELKEQGV+EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG
        EAM VANMEYRAEKK KK AYSRLKQIARLQGKKPP NPYPSAIKEIQAEERKFVRDRFF+PKIKEIAQRLKEERAAEMQ+R  G
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG
A0A6J1DDQ7 uncharacterized protein LOC1110191477.1e-9695.21Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL RTRKLVKGLAKAEP+WLKAMEQAPPPTFPR+DGTIKTI+LPEDVYV+KFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGV EE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVANMEYRAEKK KKKAY+RLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRG GW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
A0A6J1GZF0 uncharacterized protein LOC1114589142.4e-9999.47Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYV+KFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
A0A6J1KC52 uncharacterized protein LOC1114918813.4e-9897.88Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSFMKGDLL+RTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDG +KTITLPEDVYV+KFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
        EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS
A0A7N2LBH9 Uncharacterized protein4.6e-8786.7Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MSF+KGDLLTRTRKLVKGLAK++PIWLKAME APP TFPR DG +K I+LPEDVY++KFFQKHPDSK+EDAIK CSFDPPPAR+FGLRVL+LKEQGVSEE
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
        EAMAVA+MEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERK+VRDRFFNPKI EI Q+LKEE+AAE QDR RG GW
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26750.1 unknown protein5.7e-5354.84Show/hide
Query:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE
        MS+MKGDLL++TR+LV GLA  EP+WLKAME +PPP FPR +G I+ I LPED YV KF  KHP +K +D  K  +F P  AR++G RVLELKE G+SE 
Subjt:  MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEE

Query:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGS
        +AM+VANMEY +E+K  KKAY RLK++A +Q K PPP PYPSA K +  + +   +DRF  P ++ +  +LK E+   +QDR  GS
Subjt:  EAMAVANMEYRAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTCATGAAAGGAGACTTGCTAACTAGGACTAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTATTTGGCTCAAAGCCATGGAACAGGCGCCACCTCCTAC
ATTTCCTCGAATAGATGGAACAATCAAGACAATCACTCTTCCTGAGGATGTATATGTAGAAAAGTTCTTCCAGAAACATCCAGATTCAAAATACGAAGATGCGATCAAGT
TCTGTAGTTTCGATCCTCCTCCAGCCCGAATATTCGGCCTGCGAGTGCTTGAACTGAAGGAACAGGGTGTCAGTGAGGAGGAAGCCATGGCAGTAGCCAATATGGAATAC
CGGGCAGAGAAAAAGGCGAAAAAGAAGGCTTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCTAACCCGTATCCAAGTGCTATTAAGGAGAT
ACAAGCCGAGGAAAGGAAATTCGTGCGAGATCGTTTCTTCAACCCCAAGATTAAAGAGATCGCTCAAAGGTTGAAGGAGGAGAGAGCAGCTGAAATGCAGGACAGAATGA
GAGGCAGTGGCTGGTCATGA
mRNA sequenceShow/hide mRNA sequence
AGTAATCGACTCAAAACAGGTACAAAATTTACCCTGATTATATAATGTTGTGTAAATACCGAAATTGCCCCTAAACATCACAATTCTCAGCCCTAGATCATTTTTCTCTC
GACTAGCTCATCTTCCTCTCACCATTGAAGCCTCTTCGTAGGACTCTTTCAGCTCCGGCCGTTCCCTCTCGTTCTAGTGATCATTTCGTTGGTTTCGCAGATCATTGGAT
TGAATCGCAGTCCAAAGGAGGAGCCATGTCCTTCATGAAAGGAGACTTGCTAACTAGGACTAGAAAGCTCGTCAAGGGCTTGGCCAAAGCAGAACCTATTTGGCTCAAAG
CCATGGAACAGGCGCCACCTCCTACATTTCCTCGAATAGATGGAACAATCAAGACAATCACTCTTCCTGAGGATGTATATGTAGAAAAGTTCTTCCAGAAACATCCAGAT
TCAAAATACGAAGATGCGATCAAGTTCTGTAGTTTCGATCCTCCTCCAGCCCGAATATTCGGCCTGCGAGTGCTTGAACTGAAGGAACAGGGTGTCAGTGAGGAGGAAGC
CATGGCAGTAGCCAATATGGAATACCGGGCAGAGAAAAAGGCGAAAAAGAAGGCTTACTCTCGCTTGAAGCAAATTGCACGTCTTCAAGGGAAGAAACCTCCTCCTAACC
CGTATCCAAGTGCTATTAAGGAGATACAAGCCGAGGAAAGGAAATTCGTGCGAGATCGTTTCTTCAACCCCAAGATTAAAGAGATCGCTCAAAGGTTGAAGGAGGAGAGA
GCAGCTGAAATGCAGGACAGAATGAGAGGCAGTGGCTGGTCATGAAGAGTTGTTTAATTTATACGACTTCCATCCTCCCATCTTTCTTCTCGCTCTGCTCTGGAAACTAG
CTTTTGGAATAATTTTGGCAATTGGCTAAATAGGGAACGACACATTTTTTTAGATTCAAGTGACTACTACATCTGAAGCATTGGATCAAGCATGTTAAAGGATTTTTCTT
TCGATGTTATTCGGGTCTGATGTTATTCGGGTCTTGGATTAATAATAGAACGATTCAAAAGCATAAAGATTTTGC
Protein sequenceShow/hide protein sequence
MSFMKGDLLTRTRKLVKGLAKAEPIWLKAMEQAPPPTFPRIDGTIKTITLPEDVYVEKFFQKHPDSKYEDAIKFCSFDPPPARIFGLRVLELKEQGVSEEEAMAVANMEY
RAEKKAKKKAYSRLKQIARLQGKKPPPNPYPSAIKEIQAEERKFVRDRFFNPKIKEIAQRLKEERAAEMQDRMRGSGWS