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Carg14402 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14402
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:9775688..9776340
RNA-Seq ExpressionCarg14402
SyntenyCarg14402
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0034426.1 putative lipoprotein yfhM [Cucumis melo var. makuwa]2.8e-1661.18Show/hide
Query:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
        MA QTQH +M  +LLSLL+      SAS A  M+HLGQDF ASQAA+Q  QP + L N RMDLQ+NDY +  AN RHTPKPTG+V
Subjt:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
KAG6601439.1 hypothetical protein SDJN03_06672, partial [Cucurbita argyrosperma subsp. sororia]5.5e-2898.57Show/hide
Query:  MVLILLSLLLSASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
        MVLILLSLLLSASGAAIMIHLGQDFSASQAAHQ KQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
Subjt:  MVLILLSLLLSASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
KAG7032221.1 hypothetical protein SDJN02_06264, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-34100Show/hide
Query:  MAGQTQHFLMVLILLSLLLSASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
        MAGQTQHFLMVLILLSLLLSASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
Subjt:  MAGQTQHFLMVLILLSLLLSASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
KGN51928.1 hypothetical protein Csa_009059 [Cucumis sativus]1.7e-1661.18Show/hide
Query:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
        MA QTQH +M   L+SLL+      SAS A +MIHLGQDF ASQA +Q  QPL+ L N RMDLQ+NDY +  AN RHTPKPTG+V
Subjt:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
XP_008446367.1 PREDICTED: uncharacterized protein LOC103489129 [Cucumis melo]2.8e-1661.18Show/hide
Query:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
        MA QTQH +M  +LLSLL+      SAS A  M+HLGQDF ASQAA+Q  QP + L N RMDLQ+NDY +  AN RHTPKPTG+V
Subjt:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
TrEMBL top hitse value%identityAlignment
A0A0A0KQN6 Uncharacterized protein8.0e-1761.18Show/hide
Query:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
        MA QTQH +M   L+SLL+      SAS A +MIHLGQDF ASQA +Q  QPL+ L N RMDLQ+NDY +  AN RHTPKPTG+V
Subjt:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
A0A1S3BEE6 uncharacterized protein LOC1034891291.4e-1661.18Show/hide
Query:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
        MA QTQH +M  +LLSLL+      SAS A  M+HLGQDF ASQAA+Q  QP + L N RMDLQ+NDY +  AN RHTPKPTG+V
Subjt:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
A0A5A7SX31 Putative lipoprotein yfhM1.4e-1661.18Show/hide
Query:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
        MA QTQH +M  +LLSLL+      SAS A  M+HLGQDF ASQAA+Q  QP + L N RMDLQ+NDY +  AN RHTPKPTG+V
Subjt:  MAGQTQHFLMVLILLSLLL------SASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGGCCAAACCCAACACTTCCTTATGGTTTTGATCCTTCTCTCTCTACTCCTCTCTGCATCAGGAGCTGCAATTATGATCCATCTTGGTCAAGATTTTTCAGCTTC
CCAAGCTGCACATCAGACGAAGCAGCCACTGCAAAAGTTATTGAATGATAGAATGGATTTGCAGTACAATGACTATCCAGTTTCTGAAGCGAATCATCGGCACACTCCAA
AGCCAACTGGGAGAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGGCCAAACCCAACACTTCCTTATGGTTTTGATCCTTCTCTCTCTACTCCTCTCTGCATCAGGAGCTGCAATTATGATCCATCTTGGTCAAGATTTTTCAGCTTC
CCAAGCTGCACATCAGACGAAGCAGCCACTGCAAAAGTTATTGAATGATAGAATGGATTTGCAGTACAATGACTATCCAGTTTCTGAAGCGAATCATCGGCACACTCCAA
AGCCAACTGGGAGAGTTTGATAGAATAAATGTGTTCATCAAAATGTCTCATGTGAACTCTTAACTTAATCCAAAAGAATCAGACATCTAATCTGTTTTTGTGAATTGTTC
TTGCTAAACAAGTAAAAGTATCCATGAGTTGGTAATAAGGATTGAAAAAATTATAATGATATTTATAAGCATTTCACTGTACAAAAGAATGATCAGAATATGTTGAAGGG
GGGGTTTGAACAGATTCCCCATTTCTGGTAACATTATCAAAAGAGAAACTCACCCAAATCTCCCTTTCTCCTCTCCTCTCTGACC
Protein sequenceShow/hide protein sequence
MAGQTQHFLMVLILLSLLLSASGAAIMIHLGQDFSASQAAHQTKQPLQKLLNDRMDLQYNDYPVSEANHRHTPKPTGRV