; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14403 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14403
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionE3 ubiquitin-protein ligase RING1-like
Genome locationCarg_Chr04:9775204..9775809
RNA-Seq ExpressionCarg14403
SyntenyCarg14403
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601438.1 E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia]5.6e-10999Show/hide
Query:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
        MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEG PPASKASIKAMPSLPVSEL
Subjt:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL

Query:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV
        TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPST SDHSFV
Subjt:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV

Query:  Q
        Q
Subjt:  Q

XP_022956506.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]5.9e-111100Show/hide
Query:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
        MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
Subjt:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL

Query:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV
        TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV
Subjt:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV

Query:  Q
        Q
Subjt:  Q

XP_023523013.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]3.6e-10092.54Show/hide
Query:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
        MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVI ATPKEGQPPASKASIKAMPSLPVSEL
Subjt:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL

Query:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV
        TECVICLEEIEAGDLAKQMPC+HKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKK+DEEGSERRGEREIWVSFSFDN   N +S+QT PS  S HS+ 
Subjt:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV

Query:  Q
        Q
Subjt:  Q

XP_023547759.1 E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]9.5e-10998.01Show/hide
Query:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
        MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVI ATPKEGQPPASKASIKAMPSLPVSEL
Subjt:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL

Query:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV
        TECVICLEEIEAGDLAKQMPC+HKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKK+DEEGSERRGEREIWVSFSFDNVTRNGESVQTPPST SDHSFV
Subjt:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV

Query:  Q
        Q
Subjt:  Q

XP_038891708.1 E3 ubiquitin-protein ligase MPSR1-like [Benincasa hispida]7.8e-7977.23Show/hide
Query:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIP-TLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSE
        MAS P  SEL SA E L F+NRD+S IAPLFLGFAS+IR++  Q    EI+  P TLP+RFIFFNPF  QL+VIQATPK+GQPPASKASIKAMPS+PVSE
Subjt:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIP-TLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSE

Query:  LTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSF
        LTECVICLEEIE G L+KQMPC+HKFHGDCI+KWLELHGSCP+CRYQMPID EDEGKKVD EG+E RGE EIWVSFSFDN  RNGES+QT PST SDHS 
Subjt:  LTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSF

Query:  VQ
        VQ
Subjt:  VQ

TrEMBL top hitse value%identityAlignment
A0A0A0KU18 RING-type domain-containing protein6.0e-7774.63Show/hide
Query:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
        MAS P  S+L+SA E L+ +NRD+S IAPLFLGFAS++RS+  Q  +P   T  TLP+RFIFFNPF  QLMV+QATPK GQPPASKASIKAMPSLPVSE+
Subjt:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL

Query:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV
        TECVICL+EIE G LAKQMPC+HKFHGDCI+KWLELHGSCP+CRYQMPID +DEGKKV +EG+E RGE EIWVSFSFD+   NGESVQT PST SDHS+V
Subjt:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV

Query:  Q
        Q
Subjt:  Q

A0A1S3BFQ2 E3 ubiquitin-protein ligase RING1-like6.0e-7774.63Show/hide
Query:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
        MAS P  S++SSA E L+ +NRD+S IAPLFLGFAS+IRS+      P   T  TLP+RFIFFNPF  QLMV+QATPK+GQPPASKASIKAMPSLPVSE+
Subjt:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL

Query:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV
        TECVICL+EIE G LAKQMPC+HKFHG+CI+KWLELHGSCP+CRYQMPID +DEGKKV +EG+E RGE EIWVSFSFD+  RNGESVQT PST SDHS+V
Subjt:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV

Query:  Q
        Q
Subjt:  Q

A0A5D3D3N1 E3 ubiquitin-protein ligase RING1-like6.0e-7774.63Show/hide
Query:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
        MAS P  S++SSA E L+ +NRD+S IAPLFLGFAS+IRS+      P   T  TLP+RFIFFNPF  QLMV+QATPK+GQPPASKASIKAMPSLPVSE+
Subjt:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL

Query:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV
        TECVICL+EIE G LAKQMPC+HKFHG+CI+KWLELHGSCP+CRYQMPID +DEGKKV +EG+E RGE EIWVSFSFD+  RNGESVQT PST SDHS+V
Subjt:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV

Query:  Q
        Q
Subjt:  Q

A0A6J1GWR8 E3 ubiquitin-protein ligase RING1-like2.9e-111100Show/hide
Query:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
        MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
Subjt:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL

Query:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV
        TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV
Subjt:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFV

Query:  Q
        Q
Subjt:  Q

A0A6J1HTX2 E3 ubiquitin-protein ligase RING1-like4.1e-7369.8Show/hide
Query:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL
        M S+P  SELSSA E+L+ +N D+S +AP FLGFA++I +  PQSPN  I+T PTLP+RFIFFNPF  QL++IQ+TPK  QPPASKASI AMPS+ VS  
Subjt:  MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSEL

Query:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPI-DDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSF
        TECVICL+EIE G +AK+MPC+HKFHGDCIEKWLELHGSCP+CRY+MP+ DDEDEGKKV++EG+ER GEREIWVSFSFDN   N +S+QTPP   SDHS+
Subjt:  TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPI-DDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSF

Query:  VQ
        VQ
Subjt:  VQ

SwissProt top hitse value%identityAlignment
P0CH30 E3 ubiquitin-protein ligase RING16.5e-2047.06Show/hide
Query:  GQPPASKASIKAMPSLPV------SELTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKV
        G PPASK++I+A+P + +      SE  +C +C+++ E G  AKQMPC H +H DC+  WLELH SCP+CR+++P DD D  ++V
Subjt:  GQPPASKASIKAMPSLPV------SELTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKV

Q6AVN2 E3 ubiquitin-protein ligase SIRP11.3e-2045.05Show/hide
Query:  KEGQPPASKASIKAMPSLPVSELTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGE
        + G PPA K +++A+P++ + E+  C +CL+++E G  AKQMPC HKFH  CI  WLELH SCP+CR+++P    +E K ++E  +  R E
Subjt:  KEGQPPASKASIKAMPSLPVSELTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGE

Q8LPN7 E3 ubiquitin-protein ligase RING1-like2.0e-2136.97Show/hide
Query:  SSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRF--IFFNPFPPQLM--VIQATP-KEGQPPASKASIKAMPSLPV------SE
        S AF+   F+   +  +      F  VI +  P  P         +P  F   FF P   QL+  + +  P + G PPASK++I A+P++ V      SE
Subjt:  SSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRF--IFFNPFPPQLM--VIQATP-KEGQPPASKASIKAMPSLPV------SE

Query:  LTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDED-EGKKVDEEGS
        + +C +C++E E G   KQMPC H FH DC+  WLELH SCP+CR+++P DD D E +    +GS
Subjt:  LTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDED-EGKKVDEEGS

Q9LQX2 E3 ubiquitin-protein ligase MPSR15.7e-3242.05Show/hide
Query:  NRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATP-------------KEGQPPASKASIKAMPSLPVSELT-ECVIC
        NRD+    P  LGF      +D +S N +   + +   R I  NPF   ++V++ +              +EG+PPASKASI AMP + +     ECVIC
Subjt:  NRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATP-------------KEGQPPASKASIKAMPSLPVSELT-ECVIC

Query:  LEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTR
        LEE ++ +  K+MPC H+FHG CIEKWL  HGSCP+CRY+MP+D ++ GKK       R    EIWV FSF++  R
Subjt:  LEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTR

Q9SNB6 E3 ubiquitin-protein ligase RDUF11.5e-1643.59Show/hide
Query:  KEGQPPASKASIKAMPSLPVSEL-----TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPID
        + G PPASK++I+++P + +S+        C +C E  EAG   ++MPC H FHGDCI  WL +  SCP+CR+++P D
Subjt:  KEGQPPASKASIKAMPSLPVSEL-----TECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPID

Arabidopsis top hitse value%identityAlignment
AT1G14200.1 RING/U-box superfamily protein5.5e-2232.07Show/hide
Query:  MASDPVASELSSAFESLVFINRD-ISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSE
        M+S+    E SS FE ++    D +S   P+ +  A+     D  S +   +    L  RF+                K+G+ PA K+ ++ MP + + E
Subjt:  MASDPVASELSSAFESLVFINRD-ISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSE

Query:  LTE-----CVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFD
          E     C ICL+E   GD+A +MPC HKFH  C+E+WL  H +CP+CRY+MP+++ +E KK+            IW+ FS +
Subjt:  LTE-----CVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFD

AT1G26800.1 RING/U-box superfamily protein4.1e-3342.05Show/hide
Query:  NRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATP-------------KEGQPPASKASIKAMPSLPVSELT-ECVIC
        NRD+    P  LGF      +D +S N +   + +   R I  NPF   ++V++ +              +EG+PPASKASI AMP + +     ECVIC
Subjt:  NRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATP-------------KEGQPPASKASIKAMPSLPVSELT-ECVIC

Query:  LEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTR
        LEE ++ +  K+MPC H+FHG CIEKWL  HGSCP+CRY+MP+D ++ GKK       R    EIWV FSF++  R
Subjt:  LEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTR

AT1G55530.1 RING/U-box superfamily protein2.7e-2151.39Show/hide
Query:  GQPPASKASIKAMPSLPVSELTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDD
        G PPA K +++A+ ++ + E  +C +CL++ E G  AK MPC+HKFH DC+  WLELH SCP+CRYQ+P D+
Subjt:  GQPPASKASIKAMPSLPVSELTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDD

AT3G19950.1 RING/U-box superfamily protein1.4e-2236.97Show/hide
Query:  SSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRF--IFFNPFPPQLM--VIQATP-KEGQPPASKASIKAMPSLPV------SE
        S AF+   F+   +  +      F  VI +  P  P         +P  F   FF P   QL+  + +  P + G PPASK++I A+P++ V      SE
Subjt:  SSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRF--IFFNPFPPQLM--VIQATP-KEGQPPASKASIKAMPSLPV------SE

Query:  LTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDED-EGKKVDEEGS
        + +C +C++E E G   KQMPC H FH DC+  WLELH SCP+CR+++P DD D E +    +GS
Subjt:  LTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDED-EGKKVDEEGS

AT5G56340.1 RING/U-box superfamily protein7.2e-2246.32Show/hide
Query:  KEGQPPASKASIKAMPSLPVSELTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMP--IDDEDEGKKVDEEGSERRGERE
        ++G PPA K +++A+P++ + E  +C +CL++ E G  AK+MPC HKFH  CI  WLELH SCP+CR+++P   DD+DE K   E     R  RE
Subjt:  KEGQPPASKASIKAMPSLPVSELTECVICLEEIEAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMP--IDDEDEGKKVDEEGSERRGERE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCGACCCAGTCGCTTCTGAGCTTTCTTCTGCCTTCGAAAGCCTGGTTTTCATCAACAGAGACATCTCTCCCATCGCACCCCTTTTCTTGGGTTTCGCCTCCGT
CATCCGTTCAGCCGACCCTCAATCCCCAAATCCAGAAATTCAAACAATACCCACTTTGCCGAACCGATTCATCTTCTTTAATCCCTTTCCCCCTCAATTGATGGTGATCC
AAGCCACTCCCAAGGAAGGCCAACCCCCTGCCTCTAAAGCCTCCATCAAAGCCATGCCCTCTCTCCCTGTCTCTGAACTTACTGAATGTGTGATTTGTTTAGAGGAGATT
GAAGCGGGTGACCTCGCCAAACAAATGCCCTGTTCCCATAAATTCCATGGCGATTGCATTGAGAAGTGGCTGGAGTTACATGGGTCGTGCCCTATTTGTAGATATCAGAT
GCCAATTGACGATGAAGATGAAGGAAAGAAGGTTGATGAAGAAGGGTCAGAGAGGAGAGGAGAAAGGGAGATTTGGGTGAGTTTCTCTTTTGATAATGTTACCAGAAATG
GGGAATCTGTTCAAACCCCCCCTTCAACATATTCTGATCATTCTTTTGTACAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCGACCCAGTCGCTTCTGAGCTTTCTTCTGCCTTCGAAAGCCTGGTTTTCATCAACAGAGACATCTCTCCCATCGCACCCCTTTTCTTGGGTTTCGCCTCCGT
CATCCGTTCAGCCGACCCTCAATCCCCAAATCCAGAAATTCAAACAATACCCACTTTGCCGAACCGATTCATCTTCTTTAATCCCTTTCCCCCTCAATTGATGGTGATCC
AAGCCACTCCCAAGGAAGGCCAACCCCCTGCCTCTAAAGCCTCCATCAAAGCCATGCCCTCTCTCCCTGTCTCTGAACTTACTGAATGTGTGATTTGTTTAGAGGAGATT
GAAGCGGGTGACCTCGCCAAACAAATGCCCTGTTCCCATAAATTCCATGGCGATTGCATTGAGAAGTGGCTGGAGTTACATGGGTCGTGCCCTATTTGTAGATATCAGAT
GCCAATTGACGATGAAGATGAAGGAAAGAAGGTTGATGAAGAAGGGTCAGAGAGGAGAGGAGAAAGGGAGATTTGGGTGAGTTTCTCTTTTGATAATGTTACCAGAAATG
GGGAATCTGTTCAAACCCCCCCTTCAACATATTCTGATCATTCTTTTGTACAGTGA
Protein sequenceShow/hide protein sequence
MASDPVASELSSAFESLVFINRDISPIAPLFLGFASVIRSADPQSPNPEIQTIPTLPNRFIFFNPFPPQLMVIQATPKEGQPPASKASIKAMPSLPVSELTECVICLEEI
EAGDLAKQMPCSHKFHGDCIEKWLELHGSCPICRYQMPIDDEDEGKKVDEEGSERRGEREIWVSFSFDNVTRNGESVQTPPSTYSDHSFVQ