; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14413 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14413
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsigma factor binding protein 1, chloroplastic-like
Genome locationCarg_Chr18:8851016..8851474
RNA-Seq ExpressionCarg14413
SyntenyCarg14413
Gene Ontology termsGO:0006468 - protein phosphorylation (biological process)
GO:0006952 - defense response (biological process)
GO:0009738 - abscisic acid-activated signaling pathway (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0051091 - positive regulation of DNA-binding transcription factor activity (biological process)
GO:0004672 - protein kinase activity (molecular function)
GO:0004842 - ubiquitin-protein transferase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR008889 - VQ
IPR039335 - Sigma factor binding protein 1/2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573793.1 Sigma factor binding protein 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]9.8e-74100Show/hide
Query:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
        MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
Subjt:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA

Query:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL
        GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL
Subjt:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL

XP_022139181.1 uncharacterized protein LOC111010149 [Momordica charantia]9.5e-4569.68Show/hide
Query:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLL--GDDDLTDCD--H
        MD+  +KQ+K R  K +AADFKVVYIS+PMKVKTSAS+FRSLVQKLTG DSDAERFMELIAAAA++DRN+LQ S+SA AFLD+QLL   DDD  D D  H
Subjt:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLL--GDDDLTDCD--H

Query:  RLVAGKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSAL
        RLV+G IE ++YQSS+APP+DL+++NFDA+FA+MF  FLHD SSTQT+MPG + L
Subjt:  RLVAGKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSAL

XP_022945563.1 sigma factor binding protein 1, chloroplastic-like [Cucurbita moschata]9.8e-74100Show/hide
Query:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
        MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
Subjt:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA

Query:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL
        GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL
Subjt:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL

XP_022966872.1 sigma factor binding protein 1, chloroplastic-like [Cucurbita maxima]1.8e-7298.03Show/hide
Query:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
        MDLTAK+QSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
Subjt:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA

Query:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL
        GKIETAAYQSSVAPPEDLVM+NFDASFAEMFQSFLH+SSSTQTEMPGFSALL
Subjt:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL

XP_023542375.1 sigma factor binding protein 1, chloroplastic-like [Cucurbita pepo subsp. pepo]6.3e-7398.68Show/hide
Query:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
        MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
Subjt:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA

Query:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL
        GKIETAAYQSSVAPPEDLVM+NFDASFAEMFQSFLH+SSSTQTEMPGFSALL
Subjt:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL

TrEMBL top hitse value%identityAlignment
A0A6J1CBX0 uncharacterized protein LOC1110101494.6e-4569.68Show/hide
Query:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLL--GDDDLTDCD--H
        MD+  +KQ+K R  K +AADFKVVYIS+PMKVKTSAS+FRSLVQKLTG DSDAERFMELIAAAA++DRN+LQ S+SA AFLD+QLL   DDD  D D  H
Subjt:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLL--GDDDLTDCD--H

Query:  RLVAGKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSAL
        RLV+G IE ++YQSS+APP+DL+++NFDA+FA+MF  FLHD SSTQT+MPG + L
Subjt:  RLVAGKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSAL

A0A6J1G190 sigma factor binding protein 1, chloroplastic-like4.7e-74100Show/hide
Query:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
        MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
Subjt:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA

Query:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL
        GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL
Subjt:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL

A0A6J1GZT9 sigma factor binding protein 1, chloroplastic-like6.7e-3670.37Show/hide
Query:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
        MD+  KK  KR   K +AA FKVVYIS+PMKVKTSAS+FRSLVQKLTG DSDAE FMELIAA    DRN       +SAFLDYQ+LGDD+L D DHRLVA
Subjt:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA

Query:  GKIETAAYQSSVAPPE-DLVMENFDASFAEMFQSF
        GKIETAAYQS VAPPE D V++NFDASF EM   F
Subjt:  GKIETAAYQSSVAPPE-DLVMENFDASFAEMFQSF

A0A6J1HP65 sigma factor binding protein 1, chloroplastic-like8.9e-7398.03Show/hide
Query:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
        MDLTAK+QSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
Subjt:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA

Query:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL
        GKIETAAYQSSVAPPEDLVM+NFDASFAEMFQSFLH+SSSTQTEMPGFSALL
Subjt:  GKIETAAYQSSVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL

D1MWZ4 Sigma factor binding protein 19.0e-4169.23Show/hide
Query:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA
        M++T KKQ+K RSRKSAAADFKVVYIS+PMKVKTSAS+FRSLVQ+LTG DSDAERFMEL A+AAS    NLQSS SA+ F DYQLLGDDDL      +VA
Subjt:  MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVA

Query:  GKIETAAYQSSVA---PPEDL-VMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL
        GK+ETAAY+SSVA   PP+DL V+ N DASF  MF  F  DS + Q EMPG +ALL
Subjt:  GKIETAAYQSSVA---PPEDL-VMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G41180.1 VQ motif-containing protein6.7e-0450Show/hide
Query:  KRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDS
        ++R   +     KV YISNPM+V+T  S+FR LVQ+LTG D+
Subjt:  KRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDS

AT3G56710.1 sigma factor binding protein 11.0e-0436.56Show/hide
Query:  LTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRN-NLQSSTSASAFLDYQLLGDDDLTDC
        ++ K   +++   S     KV YISNPM+V+T AS+FR LVQ+LTG D+  +   E I + +S D N +  +   A   L  +  G+ D +DC
Subjt:  LTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRN-NLQSSTSASAFLDYQLLGDDDLTDC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCTTACCGCCAAGAAGCAGTCGAAGCGCCGATCTAGAAAATCGGCCGCCGCCGATTTCAAAGTCGTGTACATTTCGAATCCGATGAAGGTGAAAACCAGCGCCTC
CAGGTTCCGATCTCTCGTCCAGAAACTCACTGGCTTGGATTCCGACGCCGAGAGGTTCATGGAATTGATTGCCGCCGCTGCTTCAAGTGATCGGAATAATCTTCAATCGT
CGACATCGGCGTCGGCGTTCCTTGATTATCAACTCCTCGGCGATGACGATTTAACTGATTGTGATCATCGGCTTGTGGCGGGAAAGATTGAAACGGCGGCGTATCAGTCG
TCGGTGGCTCCGCCGGAGGATTTGGTTATGGAGAACTTTGATGCGAGTTTTGCGGAAATGTTTCAAAGCTTTTTGCATGATTCTTCTTCAACGCAAACTGAGATGCCAGG
TTTCAGTGCTCTACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCTTACCGCCAAGAAGCAGTCGAAGCGCCGATCTAGAAAATCGGCCGCCGCCGATTTCAAAGTCGTGTACATTTCGAATCCGATGAAGGTGAAAACCAGCGCCTC
CAGGTTCCGATCTCTCGTCCAGAAACTCACTGGCTTGGATTCCGACGCCGAGAGGTTCATGGAATTGATTGCCGCCGCTGCTTCAAGTGATCGGAATAATCTTCAATCGT
CGACATCGGCGTCGGCGTTCCTTGATTATCAACTCCTCGGCGATGACGATTTAACTGATTGTGATCATCGGCTTGTGGCGGGAAAGATTGAAACGGCGGCGTATCAGTCG
TCGGTGGCTCCGCCGGAGGATTTGGTTATGGAGAACTTTGATGCGAGTTTTGCGGAAATGTTTCAAAGCTTTTTGCATGATTCTTCTTCAACGCAAACTGAGATGCCAGG
TTTCAGTGCTCTACTGTAA
Protein sequenceShow/hide protein sequence
MDLTAKKQSKRRSRKSAAADFKVVYISNPMKVKTSASRFRSLVQKLTGLDSDAERFMELIAAAASSDRNNLQSSTSASAFLDYQLLGDDDLTDCDHRLVAGKIETAAYQS
SVAPPEDLVMENFDASFAEMFQSFLHDSSSTQTEMPGFSALL