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Carg14470 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14470
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionhybrid signal transduction histidine kinase L
Genome locationCarg_Chr18:8423766..8424281
RNA-Seq ExpressionCarg14470
SyntenyCarg14470
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573739.1 hypothetical protein SDJN03_27626, partial [Cucurbita argyrosperma subsp. sororia]6.0e-88100Show/hide
Query:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
        MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
Subjt:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD

Query:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Subjt:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

XP_022945533.1 uncharacterized protein LOC111449741 [Cucurbita moschata]8.1e-8598.25Show/hide
Query:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
        MSEF QQQQQPQQPQQPQQAALVYPSSTAGVKPP HHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
Subjt:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD

Query:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        IEFGFDSRNPNGKASFPPGGNGGYKGNGN NGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Subjt:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

XP_022966907.1 uncharacterized protein LOC111466471 [Cucurbita maxima]1.2e-8397.08Show/hide
Query:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
        MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHG SHSRGKEPKLHPDKEGD
Subjt:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD

Query:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        IEFGFDSRNPNGKA+FPPGGNGGYKGNGND+GNSHGNSFKPF+NGGEMRSEIKHADHHE VDINFRAGGHA
Subjt:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

XP_023541867.1 uncharacterized protein LOC111801886 [Cucurbita pepo subsp. pepo]2.1e-8598.26Show/hide
Query:  MSEF-QQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEG
        MSEF QQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEG
Subjt:  MSEF-QQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEG

Query:  DIEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        DIEFGFDSRNPNGKA+FPPGGNGGYKGNGN NGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Subjt:  DIEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

XP_038892720.1 uncharacterized protein LOC120081701 [Benincasa hispida]3.0e-5574.73Show/hide
Query:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGV---KPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSHSRGKEPKLHPD
        MSE QQQQQQ  Q QQ QQ A VYP++ A V    PPSHHSNGSFGAVFIVLAVIVV+SALACFLGRLCNRRV N QR KPEKTH G+  RGKEPKLHPD
Subjt:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGV---KPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSHSRGKEPKLHPD

Query:  KEGDIEFGFDSRNPNG-KASFP-PGGNGGYKG--NGNDNG----NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH
        KEGDIEFGFD RNPNG K  FP  GGNGG KG  NGN NG    N HGNSFKPF+NGGE RSEIKH DHHE  D NF+A GH
Subjt:  KEGDIEFGFDSRNPNG-KASFP-PGGNGGYKG--NGNDNG----NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH

TrEMBL top hitse value%identityAlignment
A0A1S3BF63 hybrid signal transduction histidine kinase L3.2e-5571.05Show/hide
Query:  MSEFQQQQQQP-QQPQQPQQAALVYP----SSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL
        MSE QQQQ+QP QQ QQ QQ A VYP    +S     PPSHHSNGSFGAVFIVLAVIVV+SALACFLGRLCNRRV N QR KPEK+H G+  +RGKEPKL
Subjt:  MSEFQQQQQQP-QQPQQPQQAALVYP----SSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL

Query:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNDNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH
        HPDKEGDIEFGFD RNP+GK  FPPG      GNGG KG GN NG       N HGNSFKPF+NGGE RSEIKH DHHE  D NF+AGGH
Subjt:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNDNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH

A0A5A7ST81 Hybrid signal transduction histidine kinase L3.2e-5571.05Show/hide
Query:  MSEFQQQQQQP-QQPQQPQQAALVYP----SSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL
        MSE QQQQ+QP QQ QQ QQ A VYP    +S     PPSHHSNGSFGAVFIVLAVIVV+SALACFLGRLCNRRV N QR KPEK+H G+  +RGKEPKL
Subjt:  MSEFQQQQQQP-QQPQQPQQAALVYP----SSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL

Query:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNDNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH
        HPDKEGDIEFGFD RNP+GK  FPPG      GNGG KG GN NG       N HGNSFKPF+NGGE RSEIKH DHHE  D NF+AGGH
Subjt:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNDNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH

A0A6J1G163 uncharacterized protein LOC1114497413.9e-8598.25Show/hide
Query:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
        MSEF QQQQQPQQPQQPQQAALVYPSSTAGVKPP HHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
Subjt:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD

Query:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        IEFGFDSRNPNGKASFPPGGNGGYKGNGN NGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
Subjt:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

A0A6J1HP92 uncharacterized protein LOC1114664715.7e-8497.08Show/hide
Query:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD
        MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHG SHSRGKEPKLHPDKEGD
Subjt:  MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGD

Query:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA
        IEFGFDSRNPNGKA+FPPGGNGGYKGNGND+GNSHGNSFKPF+NGGEMRSEIKHADHHE VDINFRAGGHA
Subjt:  IEFGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA

E5GBJ1 Uncharacterized protein3.2e-5571.05Show/hide
Query:  MSEFQQQQQQP-QQPQQPQQAALVYP----SSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL
        MSE QQQQ+QP QQ QQ QQ A VYP    +S     PPSHHSNGSFGAVFIVLAVIVV+SALACFLGRLCNRRV N QR KPEK+H G+  +RGKEPKL
Subjt:  MSEFQQQQQQP-QQPQQPQQAALVYP----SSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVN-QRRKPEKTHGGSH-SRGKEPKL

Query:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNDNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH
        HPDKEGDIEFGFD RNP+GK  FPPG      GNGG KG GN NG       N HGNSFKPF+NGGE RSEIKH DHHE  D NF+AGGH
Subjt:  HPDKEGDIEFGFDSRNPNGKASFPPG------GNGGYKGNGNDNG-------NSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23530.1 unknown protein1.6e-0936.76Show/hide
Query:  QQPQQPQQAALVYPSS------TAGVKPPSHH-SNGSFGAVFIVLAVIVVLSALACFLGRLCNR--RVVNQRRKPEKTHGGSHSRG----KEPKLHPDKE
        Q  QQ QQ  +VYP++          KP S   S+G+FG VFIVLAVI VLSALAC  GRLCNR  R   Q+      H  + S+     +  +  P + 
Subjt:  QQPQQPQQAALVYPSS------TAGVKPPSHH-SNGSFGAVFIVLAVIVVLSALACFLGRLCNR--RVVNQRRKPEKTHGGSHSRG----KEPKLHPDKE

Query:  GDIEFGFDSRNPN--GKASFPPGGNG---GYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHA---------DHHEVVDINFRAGG
        GD++FGFD + P    K S   GG     G+     + G   G        GG     IKHA         DHH   +I  R GG
Subjt:  GDIEFGFDSRNPN--GKASFPPGGNG---GYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHA---------DHHEVVDINFRAGG

AT1G70470.1 unknown protein1.5e-1240.69Show/hide
Query:  QPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNR-------RVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIE
        QPQ+ QQPQ       S+++   P S  S+GSFG  FIVLA I+VL+ALAC  GRLCNR       +  N+  K EK         +  +  P + GD+E
Subjt:  QPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNR-------RVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIE

Query:  FGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGE
        FGFD + P G  S P G NGG    G DN    G        GG+
Subjt:  FGFDSRNPNGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGE

AT1G74055.1 unknown protein8.9e-0540.32Show/hide
Query:  QQPQQPQQAALVYPSST-----AGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNR
        QQPQQ      + P +T     A    P+H+S+ S G  F V++V+++L+ L+CFLGR C R
Subjt:  QQPQQPQQAALVYPSST-----AGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGAGTTTCAACAACAACAACAACAACCTCAGCAGCCTCAGCAGCCTCAGCAGGCGGCTCTGGTTTATCCCAGCTCCACCGCCGGCGTCAAGCCTCCATCCCACCA
TTCCAACGGTTCATTTGGGGCAGTTTTTATTGTTCTTGCTGTTATTGTTGTCTTATCAGCTCTTGCTTGCTTTCTTGGCCGCCTCTGCAACCGGCGAGTTGTAAACCAGA
GGCGGAAGCCGGAGAAGACCCACGGCGGATCTCACTCCAGAGGGAAAGAACCCAAATTGCATCCTGATAAAGAAGGGGACATCGAATTTGGATTTGATTCAAGAAACCCA
AATGGGAAAGCCAGTTTCCCACCTGGTGGAAATGGAGGATACAAAGGTAATGGTAATGACAACGGTAATAGCCATGGAAATAGCTTCAAACCCTTCGACAATGGCGGCGA
AATGAGAAGCGAAATCAAACATGCTGATCATCATGAAGTAGTAGATATCAACTTCAGAGCTGGAGGACATGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGAGTTTCAACAACAACAACAACAACCTCAGCAGCCTCAGCAGCCTCAGCAGGCGGCTCTGGTTTATCCCAGCTCCACCGCCGGCGTCAAGCCTCCATCCCACCA
TTCCAACGGTTCATTTGGGGCAGTTTTTATTGTTCTTGCTGTTATTGTTGTCTTATCAGCTCTTGCTTGCTTTCTTGGCCGCCTCTGCAACCGGCGAGTTGTAAACCAGA
GGCGGAAGCCGGAGAAGACCCACGGCGGATCTCACTCCAGAGGGAAAGAACCCAAATTGCATCCTGATAAAGAAGGGGACATCGAATTTGGATTTGATTCAAGAAACCCA
AATGGGAAAGCCAGTTTCCCACCTGGTGGAAATGGAGGATACAAAGGTAATGGTAATGACAACGGTAATAGCCATGGAAATAGCTTCAAACCCTTCGACAATGGCGGCGA
AATGAGAAGCGAAATCAAACATGCTGATCATCATGAAGTAGTAGATATCAACTTCAGAGCTGGAGGACATGCTTGA
Protein sequenceShow/hide protein sequence
MSEFQQQQQQPQQPQQPQQAALVYPSSTAGVKPPSHHSNGSFGAVFIVLAVIVVLSALACFLGRLCNRRVVNQRRKPEKTHGGSHSRGKEPKLHPDKEGDIEFGFDSRNP
NGKASFPPGGNGGYKGNGNDNGNSHGNSFKPFDNGGEMRSEIKHADHHEVVDINFRAGGHA