; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14484 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14484
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPectin lyase-like superfamily protein
Genome locationCarg_Chr18:8344557..8349114
RNA-Seq ExpressionCarg14484
SyntenyCarg14484
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004650 - polygalacturonase activity (molecular function)
InterPro domainsIPR000743 - Glycoside hydrolase, family 28
IPR011050 - Pectin lyase fold/virulence factor
IPR012334 - Pectin lyase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7012799.1 putative polygalacturonase, partial [Cucurbita argyrosperma subsp. argyrosperma]4.7e-173100Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNNKVPIMIDQYYCDKYRCKN
        LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNNKVPIMIDQYYCDKYRCKN
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNNKVPIMIDQYYCDKYRCKN

Query:  QTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
        QTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
Subjt:  QTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY

XP_022944899.1 polygalacturonase At1g48100 isoform X4 [Cucurbita moschata]1.0e-15163.85Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQ+GGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------
        LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGG GTVDGQGFNWWTVSTLYNN                  
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI
                                                       KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI
Subjt:  -----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI

Query:  DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
        DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
Subjt:  DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY

XP_022966725.1 polygalacturonase At1g48100 [Cucurbita maxima]5.1e-15163.64Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQ+GGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAW AACKIPGAT
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------
        LQIP DYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN                  
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI
                                                       KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI
Subjt:  -----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI

Query:  DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
        DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
Subjt:  DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY

XP_023542213.1 polygalacturonase At1g48100 isoform X1 [Cucurbita pepo subsp. pepo]1.5e-15063.93Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGG KGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVL-QIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN-----------------
        LQIPSDYKFLIKPITLNGPCMPQLVL QIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN                 
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVL-QIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN-----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPC
                                                        KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPC
Subjt:  ------------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPC

Query:  IDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
        IDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
Subjt:  IDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY

XP_023542214.1 polygalacturonase At1g48100 isoform X2 [Cucurbita pepo subsp. pepo]6.0e-15264.07Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGG KGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------
        LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN                  
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI
                                                       KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI
Subjt:  -----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI

Query:  DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
        DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
Subjt:  DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY

TrEMBL top hitse value%identityAlignment
A0A6J1FZB4 polygalacturonase At1g48100 isoform X12.3e-14962.24Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQ+GGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVL-QIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN-----------------
        LQIPSDYKFLIKPITLNGPCMPQLVL QIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGG GTVDGQGFNWWTVSTLYNN                 
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVL-QIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN-----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQP
                                                                   KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQP
Subjt:  -----------------------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQP

Query:  IHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
        IHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
Subjt:  IHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY

A0A6J1FZB5 polygalacturonase At1g48100 isoform X31.2e-15063.71Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQ+GGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVL-QIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN-----------------
        LQIPSDYKFLIKPITLNGPCMPQLVL QIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGG GTVDGQGFNWWTVSTLYNN                 
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVL-QIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN-----------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ------------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPC
                                                        KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPC
Subjt:  ------------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPC

Query:  IDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
        IDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
Subjt:  IDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY

A0A6J1FZF6 polygalacturonase At1g48100 isoform X45.0e-15263.85Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQ+GGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------
        LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGG GTVDGQGFNWWTVSTLYNN                  
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI
                                                       KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI
Subjt:  -----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI

Query:  DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
        DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
Subjt:  DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY

A0A6J1FZF8 polygalacturonase At1g48100 isoform X29.3e-15162.37Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQ+GGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------
        LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGG GTVDGQGFNWWTVSTLYNN                  
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  ----------------------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPI
                                                                  KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPI
Subjt:  ----------------------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPI

Query:  HLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
        HLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
Subjt:  HLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY

A0A6J1HSE8 polygalacturonase At1g481002.5e-15163.64Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQ+GGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAW AACKIPGAT
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------
        LQIP DYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN                  
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNN------------------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI
                                                       KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI
Subjt:  -----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCI

Query:  DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
        DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY
Subjt:  DVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY

SwissProt top hitse value%identityAlignment
P05117 Polygalacturonase-22.4e-1830.65Show/hide
Query:  IFNILSFGAKGNGVFDDSKALIAAWKAACKI-PGATLQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSG
        + N+LSFGAKG+G   D+ A   AW  AC         +P +  +L+K IT +GPC   + ++I G + A  K+S +    L  W+ F  + N  +GG G
Subjt:  IFNILSFGAKGNGVFDDSKALIAAWKAACKI-PGATLQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSG

Query:  TVDGQGFNWWTVSTLYNNKVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQLNPSSGS
        T++G G  WW  S   N  +P          + CKN    + ++ +K      S   Q IH+   S   C +V    + +N S+ S
Subjt:  TVDGQGFNWWTVSTLYNNKVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQLNPSSGS

P43212 Polygalacturonase6.1e-2236.3Show/hide
Query:  IFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGT
        IFN+  +GA G+G  D ++A   AW+AACK P A L +P + KF++  +  NGPC P    ++DG + A    +SW  + +  WL F  L  FT+ G G 
Subjt:  IFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGT

Query:  VDGQGFNWWTVSTLYNNKVPIMIDQYYCDKYRCKNQTGAVAISGIK
        +DGQG  WW     + N   I  D+      +    TG + I G+K
Subjt:  VDGQGFNWWTVSTLYNNKVPIMIDQYYCDKYRCKNQTGAVAISGIK

Q7M1E7 Polygalacturonase1.0e-2138.74Show/hide
Query:  STIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGS
        +T+FN+  +GA G+G  D ++A    W AACK   A L +P++ KF +  +   GPC P L  ++DG ++A P  + W  S +  WL F  L +F + G+
Subjt:  STIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGS

Query:  GTVDGQGFNWW
        G +DGQG  WW
Subjt:  GTVDGQGFNWW

Q949Z1 Polygalacturonase At1g481002.7e-2222.29Show/hide
Query:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKH-------------QKQKGGGKGSGSSPAPAPLPDYNQTQS-TIFNILSFGAKGNGVFDDSKAL
        M + S IL ++++S ++      + AR  +H  K +H              +         S P P+P P    + S  +F++ SFGA G+G  DD+ A 
Subjt:  MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKH-------------QKQKGGGKGSGSSPAPAPLPDYNQTQS-TIFNILSFGAKGNGVFDDSKAL

Query:  IAAWKAACKIPGATLQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSW-SKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVST-------
          AWKAAC +    +  P    F I     +GPC P LV Q+DG ++ P     W  K +  QWL F  L  FT  G GTV+G G  WW +         
Subjt:  IAAWKAACKIPGATLQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSW-SKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVST-------

Query:  -------------------------------------------------------------------------LYNNKVP--------------------
                                                                                 +YN+ V                     
Subjt:  -------------------------------------------------------------------------LYNNKVP--------------------

Query:  -------------------------------------------------------------------IMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGS
                                                                           I++DQYYC    C+N+T AV +  ++Y  I G+
Subjt:  -------------------------------------------------------------------IMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGS

Query:  YTVQ--PIHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHAC
        Y V+  PIH ACS  + C ++ +  ++L P  G        CWN+YGK +   +P  ID CL  GS  V   A   ++ C
Subjt:  YTVQ--PIHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHAC

Q94AJ5 Probable polygalacturonase At1g801706.5e-2435Show/hide
Query:  IFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT-LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSG
        + ++ +FGAKGNGV DD+KA   AWK AC     T + +P +Y  L++PI L+GPC  +L LQI G ++AP     W   +  +WL F  L   T+ G G
Subjt:  IFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT-LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSG

Query:  TVDGQGFNWWTVSTLYNNKVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQL
        TV+G G  WW  S  +N+  P          ++CKN         ++   +I S   Q +H+A +S   C  V + G+++
Subjt:  TVDGQGFNWWTVSTLYNNKVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQL

Arabidopsis top hitse value%identityAlignment
AT1G10640.1 Pectin lyase-like superfamily protein9.9e-3624.62Show/hide
Query:  HHHNKKSKHQ-KQKGGGKG-SGSSPA--------PAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDYKFLIKPITLNG
        HHH  K K + K K   K    +SP         P PLP   Q  S +FN++ FGAKG+G  DD+KA  AAW AACKI  + + +P +Y +L+ PI+ +G
Subjt:  HHHNKKSKHQ-KQKGGGKG-SGSSPA--------PAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDYKFLIKPITLNG

Query:  P-CMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWW-------------------------------------------
        P C   +V Q+DG ++AP    +W K  L  W++F  L    + G G +DG+G  WW                                           
Subjt:  P-CMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWW-------------------------------------------

Query:  ------------TVSTLYNN--------------------------------------------------------------------------------
                    T  T+ N+                                                                                
Subjt:  ------------TVSTLYNN--------------------------------------------------------------------------------

Query:  ----------------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSS
                                                            ++PI I+Q+YCD  +CKNQT AVA+ G+ Y++I G+YTV+P+H ACS 
Subjt:  ----------------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSS

Query:  QIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHD
          PC+DV L  I+L P         A CW ++G+   P +P  ID CL+ G     ++   HD
Subjt:  QIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHD

AT1G56710.1 Pectin lyase-like superfamily protein1.5e-3125.5Show/hide
Query:  SPAPAPLPDYNQTQS---TIFNILSFGAKGNGVFDDSKALIAAWKAACKIPG---ATLQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSK
        SP+PAP P YN   +   T+F++ SFGA G+   DD+ A   AW AAC   G   A L +P  + FL+KP T NGPC   LVLQIDG +++P    SW  
Subjt:  SPAPAPLPDYNQTQS---TIFNILSFGAKGNGVFDDSKALIAAWKAACKIPG---ATLQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSK

Query:  SSLFQWLNFKWLHNFTIGGSGTVDGQGFNWW---------------------------------------------------------------------
        +   QW+ F  ++  +I GSG ++G+G  WW                                                                     
Subjt:  SSLFQWLNFKWLHNFTIGGSGTVDGQGFNWW---------------------------------------------------------------------

Query:  ---------------------------------------------------------------------TVSTLYNN-----------------------
                                                                             T ST++N+                       
Subjt:  ---------------------------------------------------------------------TVSTLYNN-----------------------

Query:  ------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQ--PIHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSI
              + PIMIDQYYC    C NQT AV IS + Y  I G+Y ++  PIH  CS  +PC ++ L  + L PS G    ++  CWN+YG  +  + P   
Subjt:  ------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQ--PIHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSI

Query:  DYCL
         YCL
Subjt:  DYCL

AT1G60590.1 Pectin lyase-like superfamily protein2.9e-3524.65Show/hide
Query:  PAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDYKFLIKPITLNGP-CMPQLVLQIDGDVLAPPKVSSWSKSSLFQW
        P P PLP      S  FN+L FGAKG+G+ DD++A  AAW +ACK+  +T+ IP DY FL+ PI+ +GP C   +V Q++G ++AP    SW    L  W
Subjt:  PAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDYKFLIKPITLNGP-CMPQLVLQIDGDVLAPPKVSSWSKSSLFQW

Query:  LNFKWLHNFTIGGSGTVDGQGFNWW----------------------------------------------------------TVSTLYNN---------
        + F  L   TI G+G +DG+G  WW                                                          T  T+ N+         
Subjt:  LNFKWLHNFTIGGSGTVDGQGFNWW----------------------------------------------------------TVSTLYNN---------

Query:  ----------------------------------------------------------------------------------------------------
                                                                                                            
Subjt:  ----------------------------------------------------------------------------------------------------

Query:  -----------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCW
                               ++PI+IDQ+YCD  +C N T AV++ G+ Y++I G+YTV+P+H ACS   PCIDV L GI+L P           CW
Subjt:  -----------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCW

Query:  NSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHD
         ++G+  +  VP  ID CL+ G  A   +   HD
Subjt:  NSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHD

AT3G26610.1 Pectin lyase-like superfamily protein7.7e-7335.26Show/hide
Query:  KGSKILTLFLVSLLVSS--SVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT
        K   IL + L  ++V++  S V +E RK HH KK K + ++        SPAPAP P  N+    +FNI S+GAKG+GV DDSKAL+ AWKAACK+ G  
Subjt:  KGSKILTLFLVSLLVSS--SVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGAT

Query:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTL---------------------
        ++IP+  +FL+K +TL GPC  + V+QI+G ++AP K+ SW  SSLFQWLNFKW+ + TI GSGT++G+G+NWW + T                      
Subjt:  LQIPSDYKFLIKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTL---------------------

Query:  ----------------------------YNN---------------------------------------------------------------------
                                     NN                                                                     
Subjt:  ----------------------------YNN---------------------------------------------------------------------

Query:  ----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCID
                                                      KVPI+IDQYYCDK +CKNQT AV+ISG+KY+ I+GS+TVQP+ +ACS+ +PC+D
Subjt:  ----------------------------------------------KVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCID

Query:  VDLIGIQLNPSSGSRGFQS-----ALCWNSYGKSQAPLVPSSIDYCLRR---GSGAVRRIARSHDHAC
        VDL+ I+L PS G RG Q+     ALCWNSYGK+Q PLVPSSI YCLR+   G    ++++RS+D  C
Subjt:  VDLIGIQLNPSSGSRGFQS-----ALCWNSYGKSQAPLVPSSIDYCLRR---GSGAVRRIARSHDHAC

AT5G14650.1 Pectin lyase-like superfamily protein2.4e-2923.66Show/hide
Query:  LTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDY
        L   L+  L SS     +AR   + K ++    +GG  G+                    N+L  GAKG+G  DD+KA   AW+ ACK+  +TL +PS  
Subjt:  LTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDY

Query:  KFLIKPITLNG-PCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWW------------------------TVS-----
         FL+ P++  G  C  ++V Q++G ++AP   S+W  S L QW+ FK L   TI G G +DG+G  WW                        TVS     
Subjt:  KFLIKPITLNG-PCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWW------------------------TVS-----

Query:  ------------------------------------------TLYNNKV---------------------------------------------------
                                                   +Y + +                                                   
Subjt:  ------------------------------------------TLYNNKV---------------------------------------------------

Query:  ------------------------------------PIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQLNPSS
                                            PI+IDQYYCD   C N+T AVA+S I Y  I G+YT +P+  ACS  +PC  + L  I+L P++
Subjt:  ------------------------------------PIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYTVQPIHLACSSQIPCIDVDLIGIQLNPSS

Query:  GSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHAC
        G        CW ++G+ +   +P     CL+    +    +RS++ AC
Subjt:  GSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHAC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAAGGAAGCAAGATTTTAACTCTTTTTCTGGTCTCTTTGCTGGTGTCTTCTTCTGTGGTTCCATTAGAGGCAAGGAAGCATCATCACAACAAGAAGAGCAAGCA
TCAGAAGCAAAAGGGTGGTGGTAAAGGCAGTGGTTCAAGCCCTGCACCAGCTCCACTTCCTGATTATAATCAAACCCAGTCCACCATTTTTAATATCTTGTCTTTTGGAG
CAAAGGGAAATGGTGTTTTTGATGATTCCAAGGCACTTATAGCAGCATGGAAAGCTGCATGCAAGATTCCTGGAGCTACATTACAAATACCTTCGGATTATAAGTTTCTT
ATCAAACCCATAACTCTAAATGGTCCTTGTATGCCTCAGCTTGTTCTTCAGATTGATGGAGATGTATTGGCGCCGCCAAAAGTGAGTTCTTGGTCCAAATCTAGCTTGTT
TCAATGGCTGAATTTCAAATGGCTGCATAATTTTACCATTGGTGGCTCTGGGACTGTGGATGGTCAGGGGTTTAATTGGTGGACTGTCTCTACGCTTTATAACAACAAGG
TACCCATTATGATAGACCAATACTACTGCGACAAGTACAGATGCAAGAACCAAACAGGAGCAGTGGCAATTTCAGGCATAAAATACGATCAAATCATAGGAAGTTACACA
GTGCAGCCTATTCACTTAGCTTGCAGCAGCCAAATCCCATGCATAGACGTTGATCTTATAGGTATCCAGCTGAACCCATCTTCAGGGTCCAGAGGCTTTCAGAGCGCTCT
GTGTTGGAACTCATATGGCAAATCTCAGGCCCCGCTTGTTCCTTCAAGCATAGACTATTGCTTGAGAAGGGGCAGTGGCGCTGTAAGGAGAATTGCTAGGTCCCATGATC
ATGCCTGCTACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACAAAGGAAGCAAGATTTTAACTCTTTTTCTGGTCTCTTTGCTGGTGTCTTCTTCTGTGGTTCCATTAGAGGCAAGGAAGCATCATCACAACAAGAAGAGCAAGCA
TCAGAAGCAAAAGGGTGGTGGTAAAGGCAGTGGTTCAAGCCCTGCACCAGCTCCACTTCCTGATTATAATCAAACCCAGTCCACCATTTTTAATATCTTGTCTTTTGGAG
CAAAGGGAAATGGTGTTTTTGATGATTCCAAGGCACTTATAGCAGCATGGAAAGCTGCATGCAAGATTCCTGGAGCTACATTACAAATACCTTCGGATTATAAGTTTCTT
ATCAAACCCATAACTCTAAATGGTCCTTGTATGCCTCAGCTTGTTCTTCAGATTGATGGAGATGTATTGGCGCCGCCAAAAGTGAGTTCTTGGTCCAAATCTAGCTTGTT
TCAATGGCTGAATTTCAAATGGCTGCATAATTTTACCATTGGTGGCTCTGGGACTGTGGATGGTCAGGGGTTTAATTGGTGGACTGTCTCTACGCTTTATAACAACAAGG
TACCCATTATGATAGACCAATACTACTGCGACAAGTACAGATGCAAGAACCAAACAGGAGCAGTGGCAATTTCAGGCATAAAATACGATCAAATCATAGGAAGTTACACA
GTGCAGCCTATTCACTTAGCTTGCAGCAGCCAAATCCCATGCATAGACGTTGATCTTATAGGTATCCAGCTGAACCCATCTTCAGGGTCCAGAGGCTTTCAGAGCGCTCT
GTGTTGGAACTCATATGGCAAATCTCAGGCCCCGCTTGTTCCTTCAAGCATAGACTATTGCTTGAGAAGGGGCAGTGGCGCTGTAAGGAGAATTGCTAGGTCCCATGATC
ATGCCTGCTACTAA
Protein sequenceShow/hide protein sequence
MNKGSKILTLFLVSLLVSSSVVPLEARKHHHNKKSKHQKQKGGGKGSGSSPAPAPLPDYNQTQSTIFNILSFGAKGNGVFDDSKALIAAWKAACKIPGATLQIPSDYKFL
IKPITLNGPCMPQLVLQIDGDVLAPPKVSSWSKSSLFQWLNFKWLHNFTIGGSGTVDGQGFNWWTVSTLYNNKVPIMIDQYYCDKYRCKNQTGAVAISGIKYDQIIGSYT
VQPIHLACSSQIPCIDVDLIGIQLNPSSGSRGFQSALCWNSYGKSQAPLVPSSIDYCLRRGSGAVRRIARSHDHACY