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Carg14510 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14510
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRibosomal protein S21 family protein
Genome locationCarg_Chr18:8156952..8157272
RNA-Seq ExpressionCarg14510
SyntenyCarg14510
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001911 - Ribosomal protein S21


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573697.1 hypothetical protein SDJN03_27584, partial [Cucurbita argyrosperma subsp. sororia]3.5e-4699.06Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRYL
        KKVR L
Subjt:  KKVRYL

KAG6581566.1 Cycloartenol-C-24-methyltransferase, partial [Cucurbita argyrosperma subsp. sororia]2.4e-3987.96Show/hide
Query:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+H      LH  QQQWRGIRVKVLNGNLERA+TFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI

Query:  LIKKVRYL
        LIKKVR L
Subjt:  LIKKVRYL

KAG7012773.1 hypothetical protein SDJN02_25526, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-47100Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRYL
        KKVRYL
Subjt:  KKVRYL

XP_022945130.1 uncharacterized protein LOC111449463 [Cucurbita moschata]3.5e-4699.06Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRYL
        KKVR L
Subjt:  KKVRYL

XP_022966846.1 uncharacterized protein LOC111466431 [Cucurbita maxima]1.0e-4598.11Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRYL
        KKVR L
Subjt:  KKVRYL

TrEMBL top hitse value%identityAlignment
A0A6J1DEG8 uncharacterized protein LOC1110196991.2e-3985.71Show/hide
Query:  MNSLARNISCSIRSSIHATAS------LHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
        MNSLARN+SC IR SIH T S      LHC QQQWRGIRVKVLNGNLERA+ FLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK
Subjt:  MNSLARNISCSIRSSIHATAS------LHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARK

Query:  LKAILIKKVRYL
        LKAILIKKVR L
Subjt:  LKAILIKKVRYL

A0A6J1F3V2 uncharacterized protein LOC1114419291.2e-3987.96Show/hide
Query:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+H      LH  QQQWRGIRVKVLNGNLERA+TFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI

Query:  LIKKVRYL
        LIKKVR L
Subjt:  LIKKVRYL

A0A6J1G018 uncharacterized protein LOC1114494631.7e-4699.06Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRYL
        KKVR L
Subjt:  KKVRYL

A0A6J1HQF3 uncharacterized protein LOC1114664315.0e-4698.11Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRYL
        KKVR L
Subjt:  KKVRYL

A0A6J1J5L6 uncharacterized protein LOC1114815074.5e-3987.04Show/hide
Query:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
        MNSL+RN+SCSIRSS+H      LH  QQQWRGIRVKVLNGNLERA+TFLQRKM+SSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI
Subjt:  MNSLARNISCSIRSSIHATA--SLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAI

Query:  LIKKVRYL
        LIKKVR L
Subjt:  LIKKVRYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G26360.1 Ribosomal protein S21 family protein3.1e-2459.43Show/hide
Query:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI
        MN++A+ +     + +    SL+   QQ RGIRVKV + +L++A+T LQ+KM+SSG+ERLIK  QTHHIKNSEK+VLARKNLER+I+S D ARKL++ILI
Subjt:  MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILI

Query:  KKVRYL
        KKVR L
Subjt:  KKVRYL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTCGTTGGCGCGGAACATATCGTGCTCCATCAGGTCTTCGATTCACGCCACTGCCTCGCTACATTGCTACCAGCAGCAATGGAGGGGGATCCGAGTGAAGGTACT
GAACGGGAATCTTGAACGGGCAATAACATTCTTGCAAAGGAAGATGCGATCGAGCGGAATCGAGCGGCTGATTAAGCGCGAGCAGACTCACCACATCAAGAACTCAGAGA
AGCGAGTTTTGGCCCGAAAGAATTTGGAGCGCAAAATTAGATCACAGGACCTTGCTCGCAAGCTTAAAGCCATTCTTATCAAGAAAGTCAGGTATTTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACTCGTTGGCGCGGAACATATCGTGCTCCATCAGGTCTTCGATTCACGCCACTGCCTCGCTACATTGCTACCAGCAGCAATGGAGGGGGATCCGAGTGAAGGTACT
GAACGGGAATCTTGAACGGGCAATAACATTCTTGCAAAGGAAGATGCGATCGAGCGGAATCGAGCGGCTGATTAAGCGCGAGCAGACTCACCACATCAAGAACTCAGAGA
AGCGAGTTTTGGCCCGAAAGAATTTGGAGCGCAAAATTAGATCACAGGACCTTGCTCGCAAGCTTAAAGCCATTCTTATCAAGAAAGTCAGGTATTTGTAG
Protein sequenceShow/hide protein sequence
MNSLARNISCSIRSSIHATASLHCYQQQWRGIRVKVLNGNLERAITFLQRKMRSSGIERLIKREQTHHIKNSEKRVLARKNLERKIRSQDLARKLKAILIKKVRYL