; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14517 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14517
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRAB6-interacting golgin
Genome locationCarg_Chr06:2191623..2193514
RNA-Seq ExpressionCarg14517
SyntenyCarg14517
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
InterPro domainsIPR007033 - RAB6-interacting golgin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137876.1 GRB10-interacting GYF protein 2 [Cucumis sativus]1.7e-7497.01Show/hide
Query:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_008442808.1 PREDICTED: uncharacterized protein LOC103486581 [Cucumis melo]7.4e-7597.6Show/hide
Query:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_022144720.1 uncharacterized protein LOC111014340 [Momordica charantia]1.1e-7094.61Show/hide
Query:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQ E  Q QQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYK+ALDAFN+KNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_022945279.1 uncharacterized protein LOC111449572 [Cucurbita moschata]4.7e-77100Show/hide
Query:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

XP_038903091.1 GRB10-interacting GYF protein 2-like [Benincasa hispida]1.4e-7396.41Show/hide
Query:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQ EQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

TrEMBL top hitse value%identityAlignment
A0A0A0LGI7 RAB6-interacting golgin8.0e-7597.01Show/hide
Query:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRK+ID
Subjt:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A1S3B6L6 RAB6-interacting golgin3.6e-7597.6Show/hide
Query:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A5D3DPH8 RAB6-interacting golgin3.6e-7597.6Show/hide
Query:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQL+VQNN GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQ QLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEAL+AFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A6J1G0J9 RAB6-interacting golgin2.3e-77100Show/hide
Query:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

A0A6J1KYK3 RAB6-interacting golgin2.3e-77100Show/hide
Query:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
        MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID
Subjt:  MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRID

Query:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
        AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR
Subjt:  AVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR

SwissProt top hitse value%identityAlignment
B1H222 RAB6-interacting golgin9.3e-0430.33Show/hide
Query:  RAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLM
        R  EE+ +RKK  + + +  +  R + ET +L  I++EL+AL D +  ++  +R RID  + E         + E EY  A      K + K QL   L 
Subjt:  RAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLM

Query:  ELVSESERLRLKKLEELSKNID
         ++ ++E  + +KLEEL + +D
Subjt:  ELVSESERLRLKKLEELSKNID

Arabidopsis top hitse value%identityAlignment
AT2G36410.1 Family of unknown function (DUF662)3.1e-5570.83Show/hide
Query:  QPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA
        QP+  QQ  ++V+  + GSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q QLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRK+ID+
Subjt:  QPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDTI
        VNKELKPLG T QKKE+EYKEALD FN+KN+EKVQLITKLME   LV ESE+LR+ KLEELSK+I+T+
Subjt:  VNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLME---LVSESERLRLKKLEELSKNIDTI

AT2G36410.2 Family of unknown function (DUF662)7.5e-5772.12Show/hide
Query:  QPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA
        QP+  QQ  ++V+  + GSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q QLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRK+ID+
Subjt:  QPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        VNKELKPLG T QKKE+EYKEALD FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Subjt:  VNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT2G36410.3 Family of unknown function (DUF662)1.1e-5571.52Show/hide
Query:  QPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA
        QP+  QQ  ++V+  + GSLSFSSH+S+EDEE++RSALS FRAKE+EIE+++MEVRE++Q QLGRVE+ETKRL+ IREELE++ADPMRKEV+ VRK+ID+
Subjt:  QPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDA

Query:  VNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        VNKELKPLG T QKK  EYKEALD FN+KN+EKVQLITKLMELV ESE+LR+ KLEELSK+I+T+
Subjt:  VNKELKPLGHTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT3G09980.1 Family of unknown function (DUF662)1.6e-5982.43Show/hide
Query:  GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEK
        GS+SFSS +SKEDEE+SR+ALS FRAKEEEIE+KKME+RE+VQ QLGRVEEETKRLA IREELE LADPMRKEVA VRK+ID+VNKELKPLGHT QKKE+
Subjt:  GSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEK

Query:  EYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI
        EYKEAL+AFN+KN+EKVQLIT+LMELV ESE++R+KKLEELSKNID+I
Subjt:  EYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTI

AT3G52920.2 Family of unknown function (DUF662)5.3e-5579.45Show/hide
Query:  SLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKE
        SLSFSS +SKEDEE++RSALS FRAKE+EIE++KMEVRE+V+ QLGRVEEET+RLA IREELE +ADPMRKEV  VRK+ID+VNKELKPLG T QKKE+E
Subjt:  SLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLGHTCQKKEKE

Query:  YKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDT
        YKEALD FN+KN+EKVQLITKLMELV ESE+LRLKKL+ELS++IDT
Subjt:  YKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCCAGAACAAGCTCAACAGCAGCAGCAATTAGTGGTGCAGAACAACCCAGGAAGCTTAAGCTTCAGCAGCCATTTGTCGAAGGAAGATGAAGAGATTTCGAGGTC
GGCTCTGTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGCGGAAGAAGATGGAGGTTAGAGAGAAGGTTCAAGTTCAGTTAGGCCGCGTCGAAGAAGAAACCAAACGCC
TCGCTTGCATTCGTGAGGAACTCGAGGCGCTTGCCGATCCGATGAGGAAGGAAGTGGCACAGGTTCGTAAAAGGATCGACGCGGTGAACAAGGAATTAAAGCCTCTGGGA
CATACCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTCGATGCCTTCAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACCAAATTAATGGAGCTGGTGAGTGA
AAGCGAGCGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGGCATTGTAGTTTTATAAGCGCTTGAAATACCCAGAGGAGAAAAAAGAATAGAAATACAGCACAAACCCCATCATTTCAAAAGCAAAAGCGAAAGAAGAGAGAGAA
AAGGCAACAAACCCAGAAAGAAAGGAGGAGGAAGAACAGAGGAATTTAAGGAAATTCATTGAGGAACAAGAAGAAGAAGAAGAGGAAGCGTTTTGTGGTTGAAAAGATGC
AGCCAGAACAAGCTCAACAGCAGCAGCAATTAGTGGTGCAGAACAACCCAGGAAGCTTAAGCTTCAGCAGCCATTTGTCGAAGGAAGATGAAGAGATTTCGAGGTCGGCT
CTGTCCACTTTCAGAGCCAAAGAAGAGGAGATCGAGCGGAAGAAGATGGAGGTTAGAGAGAAGGTTCAAGTTCAGTTAGGCCGCGTCGAAGAAGAAACCAAACGCCTCGC
TTGCATTCGTGAGGAACTCGAGGCGCTTGCCGATCCGATGAGGAAGGAAGTGGCACAGGTTCGTAAAAGGATCGACGCGGTGAACAAGGAATTAAAGCCTCTGGGACATA
CCTGTCAAAAGAAGGAAAAAGAGTACAAGGAAGCCCTCGATGCCTTCAACGACAAGAACAAGGAAAAAGTTCAGCTCATCACCAAATTAATGGAGCTGGTGAGTGAAAGC
GAGCGGTTGAGGCTGAAGAAGCTGGAGGAGCTGAGTAAGAACATAGATACGATTCGGTAAATGAATTGATTGATTGATTGATTGATTGAAGCGAGGAGGACGGATGACAA
AGCGATAACCCCCTGTTTATTAGGCTTTGGTGTGTGATGTATTTAGTATAAAACAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAA
Protein sequenceShow/hide protein sequence
MQPEQAQQQQQLVVQNNPGSLSFSSHLSKEDEEISRSALSTFRAKEEEIERKKMEVREKVQVQLGRVEEETKRLACIREELEALADPMRKEVAQVRKRIDAVNKELKPLG
HTCQKKEKEYKEALDAFNDKNKEKVQLITKLMELVSESERLRLKKLEELSKNIDTIR