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Carg14527 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14527
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein LITTLE ZIPPER 4
Genome locationCarg_Chr06:2276870..2277082
RNA-Seq ExpressionCarg14527
SyntenyCarg14527
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7028099.1 Protein LITTLE ZIPPER 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-27100Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTKSIPDLNLCSASLTNPSNSSR
        MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTKSIPDLNLCSASLTNPSNSSR
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTKSIPDLNLCSASLTNPSNSSR
XP_006481795.1 protein LITTLE ZIPPER 4-like [Citrus sinensis]9.8e-2180Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK-----SIPDLNLCSASLTNPSNSSR
        MERLNS LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKL+ G +K     +IPDLNLCS+S TNPSNSS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK-----SIPDLNLCSASLTNPSNSSR
XP_021908756.1 protein LITTLE ZIPPER 4 [Carica papaya]1.7e-2078.67Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK-----SIPDLNLCSASLTNPSNSSR
        M+RLNS LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG +K     ++PDLNLCS+S  NPSNSS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK-----SIPDLNLCSASLTNPSNSSR
XP_022144704.1 protein LITTLE ZIPPER 4 [Momordica charantia]5.2e-2285.33Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG------KTKSIPDLNLCSASLTNPSNSS
        MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG       +KSIPDLNL SAS+TNPSNS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG------KTKSIPDLNLCSASLTNPSNSS
XP_024038073.1 protein LITTLE ZIPPER 4 [Citrus clementina]5.8e-2182.19Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK---SIPDLNLCSASLTNPSNSSR
        MERLNS LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKL+ G +K   +IPDLNLCS+S TNPSNSS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK---SIPDLNLCSASLTNPSNSSR
TrEMBL top hitse value%identityAlignment
A0A067F196 Uncharacterized protein2.8e-2182.19Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK---SIPDLNLCSASLTNPSNSSR
        MERLNS LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKL+ G +K   +IPDLNLCS+S TNPSNSS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK---SIPDLNLCSASLTNPSNSSR
A0A6J1ARG7 protein LITTLE ZIPPER 42.4e-2080Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK-----SIPDLNLCSASLTNPSNSSR
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSKG +K     +IPDLNL S+S  NPSNSS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK-----SIPDLNLCSASLTNPSNSSR
A0A6J1CT31 protein LITTLE ZIPPER 42.5e-2285.33Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG------KTKSIPDLNLCSASLTNPSNSS
        MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG       +KSIPDLNL SAS+TNPSNS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKG------KTKSIPDLNLCSASLTNPSNSS
A0A6P6AQP1 protein LITTLE ZIPPER 4-like isoform X21.2e-1978.67Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK-----SIPDLNLCSASLTNPSNSSR
        MERLNS+LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKLSK  +K     +IPDLNL S+S  NPSNSS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK-----SIPDLNLCSASLTNPSNSSR
V4S7L4 Uncharacterized protein2.8e-2182.19Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK---SIPDLNLCSASLTNPSNSSR
        MERLNS LYLQNCYIMKENERLRKKAQ+LNQENQALLSELKQKL+ G +K   +IPDLNLCS+S TNPSNSS+
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTK---SIPDLNLCSASLTNPSNSSR
SwissProt top hitse value%identityAlignment
Q56WL5 Protein LITTLE ZIPPER 43.8e-1586.27Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTKS
        MERLNS LYLQNCYI+KENERLRKKAQILNQENQ LL ELKQKLSK K  S
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTKS
Q9LXI8 Protein LITTLE ZIPPER 33.5e-1374.51Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTKS
        MERLNS L+++NCYIMKENERLRKKA++LNQENQ LL +LKQKLSK K  +
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTKS
Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding1.4e-0451.16Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQK
        ME +N  LY++N  I++ENE+L+KKA +L+QEN+ L S L+ K
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQK
AT3G52770.1 protein binding2.5e-1474.51Show/hide
Query:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTKS
        MERLNS L+++NCYIMKENERLRKKA++LNQENQ LL +LKQKLSK K  +
Subjt:  MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTKS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGGCTAAATTCGGATCTGTACTTGCAGAACTGTTACATAATGAAGGAAAATGAAAGACTGAGGAAGAAAGCACAGATATTGAACCAAGAAAATCAAGCTCTTCT
TTCAGAACTGAAGCAGAAATTGTCGAAAGGGAAAACGAAATCGATCCCTGATCTTAATCTATGCTCTGCTTCGCTTACAAATCCTTCTAATTCTTCACGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAGGCTAAATTCGGATCTGTACTTGCAGAACTGTTACATAATGAAGGAAAATGAAAGACTGAGGAAGAAAGCACAGATATTGAACCAAGAAAATCAAGCTCTTCT
TTCAGAACTGAAGCAGAAATTGTCGAAAGGGAAAACGAAATCGATCCCTGATCTTAATCTATGCTCTGCTTCGCTTACAAATCCTTCTAATTCTTCACGTTGA
Protein sequenceShow/hide protein sequence
MERLNSDLYLQNCYIMKENERLRKKAQILNQENQALLSELKQKLSKGKTKSIPDLNLCSASLTNPSNSSR