; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14549 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14549
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncold-regulated 413 inner membrane protein 1, chloroplastic-like
Genome locationCarg_Chr18:2663721..2665618
RNA-Seq ExpressionCarg14549
SyntenyCarg14549
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008892 - Cold-regulated 413 protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AXF54227.1 COR1 [Cucurbita pepo]2.6e-11097.81Show/hide
Query:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSP L KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS AGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSILLVI
        FRRAFDQNSIVATVAIICVTAVS LLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSILLVI

XP_022955152.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X1 [Cucurbita moschata]3.6e-11298.28Show/hide
Query:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
        MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI    RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
Subjt:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS

Query:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
        VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
Subjt:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS

Query:  RAGSFRRAFDQNSIVATVAIICVTAVSILLVI
        RAGSFRRAFDQNSIVATVAIICVTAVSILLVI
Subjt:  RAGSFRRAFDQNSIVATVAIICVTAVSILLVI

XP_022955155.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita moschata]6.5e-114100Show/hide
Query:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSILLVI
        FRRAFDQNSIVATVAIICVTAVSILLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSILLVI

XP_022994881.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X2 [Cucurbita maxima]1.4e-11198.25Show/hide
Query:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSP L+KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSILLVI
        FRRAFDQNSIVATVAIICVTAVS LLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSILLVI

XP_023542165.1 cold-regulated 413 inner membrane protein 1, chloroplastic-like, partial [Cucurbita pepo subsp. pepo]4.4e-11097.37Show/hide
Query:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        +VCVLSSAISLHSP L KSKLSAPLSLRSSLPNAKLTFNPAAKQ  ICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSILLVI
        FRRAFDQNSIVATVAIICVTAVS LLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSILLVI

TrEMBL top hitse value%identityAlignment
A0A345BTH0 COR11.2e-11097.81Show/hide
Query:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSP L KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS AGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSILLVI
        FRRAFDQNSIVATVAIICVTAVS LLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSILLVI

A0A6J1GT59 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X11.7e-11298.28Show/hide
Query:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
        MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI    RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
Subjt:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS

Query:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
        VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
Subjt:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS

Query:  RAGSFRRAFDQNSIVATVAIICVTAVSILLVI
        RAGSFRRAFDQNSIVATVAIICVTAVSILLVI
Subjt:  RAGSFRRAFDQNSIVATVAIICVTAVSILLVI

A0A6J1GUE0 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X23.1e-114100Show/hide
Query:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSILLVI
        FRRAFDQNSIVATVAIICVTAVSILLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSILLVI

A0A6J1K0I6 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X26.6e-11298.25Show/hide
Query:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
        MVCVLSSAISLHSP L+KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM
Subjt:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILM

Query:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
        LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS
Subjt:  LARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGS

Query:  FRRAFDQNSIVATVAIICVTAVSILLVI
        FRRAFDQNSIVATVAIICVTAVS LLVI
Subjt:  FRRAFDQNSIVATVAIICVTAVSILLVI

A0A6J1K438 cold-regulated 413 inner membrane protein 1, chloroplastic-like isoform X13.6e-11096.55Show/hide
Query:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
        MVCVLSSAISLHSP L+KSKLSAPLSLRSSLPNAKLTFNPAAKQS ICSNPI    RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS
Subjt:  MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPI----RFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISS

Query:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
        VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS
Subjt:  VILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFS

Query:  RAGSFRRAFDQNSIVATVAIICVTAVSILLVI
        RAGSFRRAFDQNSIVATVAIICVTAVS LLVI
Subjt:  RAGSFRRAFDQNSIVATVAIICVTAVSILLVI

SwissProt top hitse value%identityAlignment
F4I1G5 Cold-regulated 413 inner membrane protein 2, chloroplastic1.6e-5965.24Show/hide
Query:  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMP-LSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLAL
        S++C NP+R       ++T++    K+R+RG S VCYA P LS  NLQWISTIS V LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLAL
Subjt:  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMP-LSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLAL

Query:  LVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI
        L RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVAII VT VS L +I
Subjt:  LVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI

O23164 Cold-regulated 413 plasma membrane protein 44.4e-1232.86Show/hide
Query:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT
        LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G 
Subjt:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICV
        +I L+IA YL  +H   +G F+ +F Q N I  T+ I+ +
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICV

Q94AL8 Cold-regulated 413 inner membrane protein 1, chloroplastic1.6e-5962.37Show/hide
Query:  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALL
        S +C NP+R       ++T++  + K+R+RG S VCYA P+SA +LQWISTIS + LMLARGTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+
Subjt:  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALL

Query:  VRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI
         RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG II++ I+ +LAFQHFSRAGS  +A+++ S++ATVAII VT VS+LL++
Subjt:  VRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI

Q9SVL6 Cold-regulated 413 plasma membrane protein 22.8e-1130.87Show/hide
Query:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGT
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  GT
Subjt:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGT

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICVTAVSILLVI
        +ISL I  YL  +H   +G FR +F Q   +  T+ II +    +  +I
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICVTAVSILLVI

Q9XIM7 Cold-regulated 413 plasma membrane protein 19.1e-1033.56Show/hide
Query:  LQWISTISSV-ILMLAR---GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT
        L+W+++I+++ +L+L R    T +  S ++P      P+ +    +GE G W AF+A++V+LFF       LE+P   +LL +VAP  +    R +  G 
Subjt:  LQWISTISSV-ILMLAR---GTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICVTAVSILLVI
         I L I  YL  +H   +G FR AF + N I  TV IIC+    +  +I
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICVTAVSILLVI

Arabidopsis top hitse value%identityAlignment
AT1G29390.1 cold regulated 314 thylakoid membrane 21.2e-6065.24Show/hide
Query:  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMP-LSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLAL
        S++C NP+R       ++T++    K+R+RG S VCYA P LS  NLQWISTIS V LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLAL
Subjt:  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMP-LSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLAL

Query:  LVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI
        L RLFF  P ELE+PFI+LLLVIVAPYQV ++RG QEG I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVAII VT VS L +I
Subjt:  LVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI

AT1G29390.2 cold regulated 314 thylakoid membrane 24.1e-5871.6Show/hide
Query:  KKRRRGLSAVCYAMP-LSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVA
        K+R+RG S VCYA P LS  NLQWISTIS V LM ARGTGI KSF+VPLFALQAP  ++SW+KGEYGIW+AFLALL RLFF  P ELE+PFI+LLLVIVA
Subjt:  KKRRRGLSAVCYAMP-LSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVA

Query:  PYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI
        PYQV ++RG QEG I+SL I+ +LAFQHFSRAG+ ++AFDQNS++ATVAII VT VS L +I
Subjt:  PYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI

AT1G29395.1 COLD REGULATED 314 INNER MEMBRANE 11.2e-6062.37Show/hide
Query:  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALL
        S +C NP+R       ++T++  + K+R+RG S VCYA P+SA +LQWISTIS + LMLARGTGI KS +VPLFAL AP+S+++WIKGEYG+W+AFLAL+
Subjt:  SLICSNPIRFGFGSDVSSTLA--INKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALL

Query:  VRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI
         RLFF  PGELE+PFI+LLLVIVAPYQV N+RG QEG II++ I+ +LAFQHFSRAGS  +A+++ S++ATVAII VT VS+LL++
Subjt:  VRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVTAVSILLVI

AT3G50830.1 cold-regulated 413-plasma membrane 22.0e-1230.87Show/hide
Query:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGT
        L+++++ +++ L++   T     +  S ++P   L  P+ + +++ G+ G W AF+A+++RLFF    P  LE+P   +LL++V+P +   ++RGT  GT
Subjt:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAP-YQVQNLRGTQEGT

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICVTAVSILLVI
        +ISL I  YL  +H   +G FR +F Q   +  T+ II +    +  +I
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICVTAVSILLVI

AT4G37220.1 Cold acclimation protein WCOR413 family3.1e-1332.86Show/hide
Query:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT
        LQW ++I ++ L++   T     +  + +VP      P+ +  +  G++G W A +A++VRLFF    P  LEIP   +L+V+V+P  +   LR +  G 
Subjt:  LQWISTISSVILMLARGTG----IQKSFIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFF--FIPGELEIPFISLLLVIVAPYQVQ-NLRGTQEGT

Query:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICV
        +I L+IA YL  +H   +G F+ +F Q N I  T+ I+ +
Subjt:  IISLLIAAYLAFQHFSRAGSFRRAFDQ-NSIVATVAIICV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTGTGTATTATCTTCTGCTATTTCACTTCACAGTCCTGTTCTATACAAATCCAAGCTATCCGCTCCTCTCTCTCTAAGATCCTCTCTGCCGAATGCAAAGCTCAC
GTTTAATCCTGCCGCTAAACAGAGTTTGATATGTTCTAATCCGATCAGGTTTGGTTTCGGTAGCGACGTGAGTTCGACGTTGGCGATTAACAAGAAGAGGAGGCGTGGTT
TGAGTGCTGTATGTTACGCGATGCCTCTTTCTGCTCGCAATCTTCAGTGGATCTCCACTATTTCTTCTGTGATTTTAATGCTCGCAAGGGGGACTGGGATCCAGAAGTCA
TTTATCGTTCCGCTATTTGCTCTTCAGGCTCCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATCTGGAGCGCATTTTTGGCACTTCTTGTTCGTCTGTTTTT
CTTCATCCCTGGTGAACTCGAGATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAAAACTTAAGGGGAACTCAAGAAGGGACCATCATCTCAC
TACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAATTCAATTGTTGCAACAGTGGCAATCATTTGTGTAACG
GCTGTCTCAATCCTGCTCGTGATCTGA
mRNA sequenceShow/hide mRNA sequence
CAAAATGAAAAACTTTGGTAATATTTTTGCTATCCATTATAAATAGAATAAACTGAAATTAAGATTGACGTGTTCGAGTTGAACGACAATTGGCCCAATCACTCCACTTC
GGTAAGGCGGCTCTGGATTCTTCGTGTTCATCAGTCAGGCAAGCGACGATTTGCTTGTTGAATCAAAACTAGAGAATCGAAAGCATCGTTTACAGTCCAAATCTGAGAGA
AGATAGAAGCTGAACCAGGCAACGGAAGAAAGGGGAAATGGTTTGTGTATTATCTTCTGCTATTTCACTTCACAGTCCTGTTCTATACAAATCCAAGCTATCCGCTCCTC
TCTCTCTAAGATCCTCTCTGCCGAATGCAAAGCTCACGTTTAATCCTGCCGCTAAACAGAGTTTGATATGTTCTAATCCGATCAGGTTTGGTTTCGGTAGCGACGTGAGT
TCGACGTTGGCGATTAACAAGAAGAGGAGGCGTGGTTTGAGTGCTGTATGTTACGCGATGCCTCTTTCTGCTCGCAATCTTCAGTGGATCTCCACTATTTCTTCTGTGAT
TTTAATGCTCGCAAGGGGGACTGGGATCCAGAAGTCATTTATCGTTCCGCTATTTGCTCTTCAGGCTCCTGCAAGTGTTATCTCGTGGATTAAAGGAGAATATGGCATCT
GGAGCGCATTTTTGGCACTTCTTGTTCGTCTGTTTTTCTTCATCCCTGGTGAACTCGAGATACCATTCATATCATTACTTTTGGTGATTGTGGCCCCATATCAAGTCCAA
AACTTAAGGGGAACTCAAGAAGGGACCATCATCTCACTACTGATTGCAGCATATTTGGCTTTCCAGCATTTCTCTCGAGCTGGCAGCTTTCGGAGAGCTTTTGATCAGAA
TTCAATTGTTGCAACAGTGGCAATCATTTGTGTAACGGCTGTCTCAATCCTGCTCGTGATCTGA
Protein sequenceShow/hide protein sequence
MVCVLSSAISLHSPVLYKSKLSAPLSLRSSLPNAKLTFNPAAKQSLICSNPIRFGFGSDVSSTLAINKKRRRGLSAVCYAMPLSARNLQWISTISSVILMLARGTGIQKS
FIVPLFALQAPASVISWIKGEYGIWSAFLALLVRLFFFIPGELEIPFISLLLVIVAPYQVQNLRGTQEGTIISLLIAAYLAFQHFSRAGSFRRAFDQNSIVATVAIICVT
AVSILLVI