; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14552 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14552
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S ribosomal protein L32, putative
Genome locationCarg_Chr18:2648635..2651020
RNA-Seq ExpressionCarg14552
SyntenyCarg14552
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR001515 - Ribosomal protein L32e
IPR036351 - Ribosomal protein L32e superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573344.1 60S ribosomal protein L32-1, partial [Cucurbita argyrosperma subsp. sororia]3.8e-6699.25Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRTTKFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_022140193.1 60S ribosomal protein L32-1 [Momordica charantia]7.3e-6597.74Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKR  KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_022955208.1 60S ribosomal protein L32-1-like [Cucurbita moschata]1.0e-66100Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_023542869.1 60S ribosomal protein L32-1 [Cucurbita pepo subsp. pepo]5.0e-6698.5Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKRTTKFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

XP_038894346.1 60S ribosomal protein L32-1 [Benincasa hispida]7.3e-6596.99Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKRT KFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

TrEMBL top hitse value%identityAlignment
A0A6J1CF23 60S ribosomal protein L32-13.5e-6597.74Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKR  KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1EP15 60S ribosomal protein L32-17.8e-6596.24Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKRT KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1GUI9 60S ribosomal protein L32-1-like4.9e-67100Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1K6F1 60S ribosomal protein L32-1-like4.9e-67100Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

A0A6J1KGP3 60S ribosomal protein L32-17.8e-6596.24Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLL+KKIVKKRT KFKRPQSDRKISVKE+WRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELE+LMMHNRTYCAEIAHD
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRKEIVERAAQLDVVVTNKLARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

SwissProt top hitse value%identityAlignment
E2RKA8 60S ribosomal protein L323.9e-4569.23Show/hide
Query:  PLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST
        PL+  KIVKKRT KF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELEVL+M N++YCAEIAH+VS+
Subjt:  PLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

P49211 60S ribosomal protein L32-18.6e-6186.47Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKFVVHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRK IVERA+QLDVVVTN+LARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

P62910 60S ribosomal protein L323.9e-4569.23Show/hide
Query:  PLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST
        PL+  KIVKKRT KF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELEVL+M N++YCAEIAH+VS+
Subjt:  PLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

Q76KA3 60S ribosomal protein L323.9e-4569.23Show/hide
Query:  PLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST
        PL+  KIVKKRT KF R QSDR + +K NWR+P+GID+RVRR+FKG  LMPNIGYG++KKT+H LP+GF+KF+VHNVKELEVL+M N++YCAEIAH+VS+
Subjt:  PLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVST

Query:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE
        + RK IVERAAQL + VTN  ARLRS+E+E
Subjt:  RKRKEIVERAAQLDVVVTNKLARLRSQEDE

Q9FHG2 60S ribosomal protein L32-25.6e-6084.21Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

Arabidopsis top hitse value%identityAlignment
AT4G18100.1 Ribosomal protein L32e6.1e-6286.47Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKFVVHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        VST+KRK IVERA+QLDVVVTN+LARLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

AT5G46430.1 Ribosomal protein L32e4.0e-6184.21Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE

AT5G46430.2 Ribosomal protein L32e4.0e-6184.21Show/hide
Query:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD
        MAVPLLTKK+VKKR+ KF RPQSDR+I+VKE+WRRPKGIDSRVRRKFKG TLMPN+GYG+DKKTRHYLPNGFKKF+VHN  ELE+LMMHNRTYCAEIAH+
Subjt:  MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHD

Query:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE
        +ST+KRK IVERA+QLDVVV+NKL RLRSQEDE
Subjt:  VSTRKRKEIVERAAQLDVVVTNKLARLRSQEDE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTCCTTTGCTGACGAAGAAGATCGTGAAGAAGAGGACCACCAAGTTTAAGAGGCCACAGAGTGATCGAAAGATCTCCGTTAAGGAAAATTGGAGAAGGCCAAA
GGGTATCGATTCCAGAGTAAGGAGAAAGTTCAAGGGATGTACTCTGATGCCAAACATTGGCTACGGGACTGACAAAAAGACCCGCCACTACCTTCCTAATGGGTTCAAGA
AGTTCGTTGTTCACAATGTCAAGGAGCTTGAAGTTCTGATGATGCACAACAGGACTTACTGTGCCGAAATCGCCCATGACGTTTCCACAAGGAAGAGGAAAGAGATTGTT
GAGAGGGCAGCTCAACTTGATGTGGTAGTTACCAACAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGA
mRNA sequenceShow/hide mRNA sequence
AACCCTAGTTCTGTAAGTTCTTCTCTTTGATCCGCCGCTAGGGTTTATTGGCTTATTCTCGTATTTCAAATCTGTTTCATTGTCTTTAGGTTGAGGAGATTTCGTTGTGT
TGCTACTATCTTTCTCAATCGTTTTGGTTAATTCTGTTTTTCCCCTAGCGTGCCCACAATTTGTTGTTTTTTTTTTTTATTTTTTATTTTGTTCATTTAGGGTTGATTTG
AAGTTTTCTAGGATATGATACCTTTGAGATGATTAATAATCGTACTTGTTATGAAATCTGTAGATATAAGTGAAAATGGCGGTTCCTTTGCTGACGAAGAAGATCGTGAA
GAAGAGGACCACCAAGTTTAAGAGGCCACAGAGTGATCGAAAGATCTCCGTTAAGGAAAATTGGAGAAGGCCAAAGGGTATCGATTCCAGAGTAAGGAGAAAGTTCAAGG
GATGTACTCTGATGCCAAACATTGGCTACGGGACTGACAAAAAGACCCGCCACTACCTTCCTAATGGGTTCAAGAAGTTCGTTGTTCACAATGTCAAGGAGCTTGAAGTT
CTGATGATGCACAACAGGACTTACTGTGCCGAAATCGCCCATGACGTTTCCACAAGGAAGAGGAAAGAGATTGTTGAGAGGGCAGCTCAACTTGATGTGGTAGTTACCAA
CAAGCTTGCTAGGTTGCGCAGCCAAGAGGATGAATGAACCATTTAGATCCACTTTTCATCATGTTTTGTAGTGAGATTTCGTTAATATATACAATTTTTGTTGGATTTAT
GAGATTTTGACATTAATGAGTTATGAATTCACAACCATCTCTTTGACAATATATTTTTTATACTTCAAATTATGACGTTTATCTTCATGAGCTTTTTGGTTCTCTCCGTT
TCTTCTTGTTTTAATCGGATGTTTCCTTTGGCAGCATTTTCTTCTTCTGTGTCCAAATCTTTAGAACATTTTAGTGTTCTTGAGTAGTCAGAGGGTGACATGGC
Protein sequenceShow/hide protein sequence
MAVPLLTKKIVKKRTTKFKRPQSDRKISVKENWRRPKGIDSRVRRKFKGCTLMPNIGYGTDKKTRHYLPNGFKKFVVHNVKELEVLMMHNRTYCAEIAHDVSTRKRKEIV
ERAAQLDVVVTNKLARLRSQEDE