; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14576 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14576
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSAP30-binding protein-like
Genome locationCarg_Chr18:2456209..2457297
RNA-Seq ExpressionCarg14576
SyntenyCarg14576
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0016874 - ligase activity (molecular function)
InterPro domainsIPR012479 - SAP30-binding protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573316.1 SAP30-binding protein, partial [Cucurbita argyrosperma subsp. sororia]5.0e-6598.58Show/hide
Query:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
        Y  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
Subjt:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA

Query:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
        SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
Subjt:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS

KAG7012484.1 hypothetical protein SDJN02_25236, partial [Cucurbita argyrosperma subsp. argyrosperma]5.8e-74100Show/hide
Query:  MRLLSNSNVISEVAYFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDG
        MRLLSNSNVISEVAYFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDG
Subjt:  MRLLSNSNVISEVAYFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDG

Query:  DRRNPVISGGSDAASAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
        DRRNPVISGGSDAASAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
Subjt:  DRRNPVISGGSDAASAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS

XP_022955191.1 DNA ligase 1-like isoform X1 [Cucurbita moschata]5.0e-6598.58Show/hide
Query:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
        Y  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
Subjt:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA

Query:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
        SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
Subjt:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS

XP_022994803.1 DNA ligase 1 isoform X1 [Cucurbita maxima]5.0e-6598.58Show/hide
Query:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
        Y  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
Subjt:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA

Query:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
        SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
Subjt:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS

XP_023541826.1 uncharacterized protein LOC111801864 isoform X1 [Cucurbita pepo subsp. pepo]5.0e-6598.58Show/hide
Query:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
        Y  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
Subjt:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA

Query:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
        SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
Subjt:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS

TrEMBL top hitse value%identityAlignment
A0A1S3B7X1 uncharacterized protein LOC1034869716.1e-6192.91Show/hide
Query:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
        Y  IEADMKREMERKELERKKSPKMEFVSGGTQ GGTVV APK+NIPFSGVSAI  SGLHSAA ASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
Subjt:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA

Query:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
        SAH ALLS+ANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
Subjt:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS

A0A5A7UPK6 SAP30-binding protein-like6.1e-6192.91Show/hide
Query:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
        Y  IEADMKREMERKELERKKSPKMEFVSGGTQ GGTVV APK+NIPFSGVSAI  SGLHSAA ASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
Subjt:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA

Query:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
        SAH ALLS+ANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
Subjt:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS

A0A6J1EGS0 uncharacterized protein LOC111434175 isoform X11.8e-5787.5Show/hide
Query:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
        Y  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVV APK+NIPFSGVSA+ G+GLHS A ASDAI RDGRQNKKSKWDKVDGDR+NPVISGGSDAA
Subjt:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA

Query:  SAHTALLSSANVGSGYMAFAQQRRREAEEK---RSSERKLDRRS
        SAH+ LLS+ANVGSGYMAFAQQRRR AEEK   RSSERKLDRRS
Subjt:  SAHTALLSSANVGSGYMAFAQQRRREAEEK---RSSERKLDRRS

A0A6J1GT35 DNA ligase 1-like isoform X12.4e-6598.58Show/hide
Query:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
        Y  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
Subjt:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA

Query:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
        SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
Subjt:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS

A0A6J1K652 DNA ligase 1 isoform X12.4e-6598.58Show/hide
Query:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
        Y  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA
Subjt:  YFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGSDAA

Query:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
        SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
Subjt:  SAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29220.1 transcriptional regulator family protein8.5e-3156.34Show/hide
Query:  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGS----DA
        IE DMK E ERKE E KK+ K++FVS GTQP G V  A K NIP  G+ A+  SGL S    ++   RDGR NKKSKWDKVDGD +NP ++ G+     +
Subjt:  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGS----DA

Query:  ASAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
          ++ AL+S+ + GSGY AFAQQRRRE E +RSSERKL+RRS
Subjt:  ASAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS

AT1G29220.2 transcriptional regulator family protein8.5e-3156.34Show/hide
Query:  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGS----DA
        IE DMK E ERKE E KK+ K++FVS GTQP G V  A K NIP  G+ A+  SGL S    ++   RDGR NKKSKWDKVDGD +NP ++ G+     +
Subjt:  IEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGGS----DA

Query:  ASAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS
          ++ AL+S+ + GSGY AFAQQRRRE E +RSSERKL+RRS
Subjt:  ASAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGCTTATTATCAAATTCAAATGTTATTTCTGAAGTTGCCTATTTTGTTATAGAGGCTGACATGAAACGTGAGATGGAGAGGAAGGAGCTGGAAAGGAAGAAAAGTCC
GAAGATGGAGTTTGTTTCAGGAGGAACACAACCTGGTGGTACAGTTGTGAATGCTCCTAAATTAAATATACCTTTTTCAGGTGTTTCGGCTATCGTTGGTAGTGGTCTAC
ATTCAGCAGCTTCTGCATCTGATGCCATTCCTAGGGATGGAAGACAAAACAAAAAATCAAAATGGGATAAGGTAGATGGTGATAGAAGAAACCCAGTAATTTCTGGTGGC
TCAGATGCAGCTAGTGCTCATACAGCTTTACTATCTTCTGCTAATGTTGGCTCTGGATACATGGCTTTTGCGCAACAGAGACGGCGAGAGGCTGAAGAAAAAAGATCCAG
TGAGAGAAAGTTGGATAGAAGATCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGCTTATTATCAAATTCAAATGTTATTTCTGAAGTTGCCTATTTTGTTATAGAGGCTGACATGAAACGTGAGATGGAGAGGAAGGAGCTGGAAAGGAAGAAAAGTCC
GAAGATGGAGTTTGTTTCAGGAGGAACACAACCTGGTGGTACAGTTGTGAATGCTCCTAAATTAAATATACCTTTTTCAGGTGTTTCGGCTATCGTTGGTAGTGGTCTAC
ATTCAGCAGCTTCTGCATCTGATGCCATTCCTAGGGATGGAAGACAAAACAAAAAATCAAAATGGGATAAGGTAGATGGTGATAGAAGAAACCCAGTAATTTCTGGTGGC
TCAGATGCAGCTAGTGCTCATACAGCTTTACTATCTTCTGCTAATGTTGGCTCTGGATACATGGCTTTTGCGCAACAGAGACGGCGAGAGGCTGAAGAAAAAAGATCCAG
TGAGAGAAAGTTGGATAGAAGATCCTAAGAGCTATGAATTCTGTTCCATAACATTTAGTTCTAAACCATTTTGAAAGGCTTGGGAAATGGCCACATTGTAGCTTTATATC
TGTGACTCTAACCATATATACGGTCAGAATGAAAATGTAATACGTCAGTTACCGTTAGTTTCTTTTGAAGGTGCAATATTGCTTGAAACTCTCTTTTTTCATCAATCTCC
TTGACTTGTAAAGATTATCCAGGGGCAAACAAATTTCGCCAAACGATGGAGGAAGATATTTTTGTATGAGTTTCATGAGGGGGAAAAATTTGCTGCACATCAAGTACATG
GT
Protein sequenceShow/hide protein sequence
MRLLSNSNVISEVAYFVIEADMKREMERKELERKKSPKMEFVSGGTQPGGTVVNAPKLNIPFSGVSAIVGSGLHSAASASDAIPRDGRQNKKSKWDKVDGDRRNPVISGG
SDAASAHTALLSSANVGSGYMAFAQQRRREAEEKRSSERKLDRRS