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Carg14583 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14583
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionrhoGEF domain-containing protein gxcI-like
Genome locationCarg_Chr18:2413258..2414653
RNA-Seq ExpressionCarg14583
SyntenyCarg14583
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573309.1 hypothetical protein SDJN03_27196, partial [Cucurbita argyrosperma subsp. sororia]6.1e-37100Show/hide
Query:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP
        MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP
Subjt:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP

KAG6583958.1 hypothetical protein SDJN03_19890, partial [Cucurbita argyrosperma subsp. sororia]5.5e-2261.54Show/hide
Query:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVA----------------------TNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSI
        MPLPPN DK RSRSS+ RKKR   NNN   HHSDR+  A                      +NLL+SDQYLSEILSEK STHR RRRGRVGVWRPHL+SI
Subjt:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVA----------------------TNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSI

Query:  CESP
        CESP
Subjt:  CESP

KAG7012477.1 hypothetical protein SDJN02_25229, partial [Cucurbita argyrosperma subsp. argyrosperma]4.5e-64100Show/hide
Query:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESPVRSHVNPLRFGNPTSPLS
        MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESPVRSHVNPLRFGNPTSPLS
Subjt:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESPVRSHVNPLRFGNPTSPLS

Query:  RPQSSRQSATPPPLHRPFSCWAQASD
        RPQSSRQSATPPPLHRPFSCWAQASD
Subjt:  RPQSSRQSATPPPLHRPFSCWAQASD

XP_023519997.1 uncharacterized protein LOC111783307, partial [Cucurbita pepo subsp. pepo]3.2e-2262.75Show/hide
Query:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVA--------------------TNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICE
        MPLPPN DK RSRSS+ RKKR   NNN   HHSDR+  A                    +NLL+SDQYLSEILSEK STHR RRRGRVGVWRPHL+SICE
Subjt:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVA--------------------TNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICE

Query:  SP
        SP
Subjt:  SP

XP_023542170.1 uncharacterized protein LOC111802134 [Cucurbita pepo subsp. pepo]1.1e-3392.68Show/hide
Query:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP
        MPLPPNSDKARSRSSAGRKKRDIANNN  THHSDRSA  TNLLLSDQYLSEILSEKVSTHR RRRGR+GVWRPHLQSICESP
Subjt:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP

TrEMBL top hitse value%identityAlignment
A0A2I4DK90 uncharacterized protein LOC1089809491.5e-1760.98Show/hide
Query:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP
        MP+P N +K RSRSS  +K+R+  +N      ++ +   TNLL+SDQYL+EILSEK+ST R RRRGRVGVWRPHL+SICESP
Subjt:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP

A0A5N6Q9J4 Uncharacterized protein1.8e-1863.1Show/hide
Query:  MPLPPNSDKARSRSSAGRKKRDIA--NNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP
        MP+P   +K RSRSS  +KKR+ A  N N   + S+ ++  TNLL+SD+YLSEILSEK+ST R RRRGRVGVWRPHL+SICESP
Subjt:  MPLPPNSDKARSRSSAGRKKRDIA--NNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP

A0A6J1KLR7 rhoGEF domain-containing protein gxcI-like1.3e-2159.46Show/hide
Query:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVA------------------------TNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQ
        MPLPPN DK RSRSS+ RKKR   NNN   HHSDR+  A                        +NL +SDQYLSEILSEK STHR RRRGRVGVWRPHL+
Subjt:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVA------------------------TNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQ

Query:  SICESPVRSHV
        SICESP  SHV
Subjt:  SICESPVRSHV

B9H2H8 Uncharacterized protein6.8e-1859.78Show/hide
Query:  MPLPPNSDKARSRSSAG----RKKRDIANN-----NGATHH-SDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP
        MP PP  +   SRSS G    +K+R+I+NN     N +THH +D  ++ TNLL+SDQYLSEILSEK+ST R RRRGRVGVWRPHL+SI E+P
Subjt:  MPLPPNSDKARSRSSAG----RKKRDIANN-----NGATHH-SDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP

F6HM99 Uncharacterized protein4.7e-1960.92Show/hide
Query:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHH-----SDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP
        MP+PP  +K RSRSS  +K+RD  +NN  THH     ++ +   TNLL+SD+YLSEILSEK+ST R RRRGRVGVWRPHL+SI E+P
Subjt:  MPLPPNSDKARSRSSAGRKKRDIANNNGATHH-----SDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G29195.1 unknown protein3.0e-1047.95Show/hide
Query:  RSRSSAGRKKRD---IANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICE
        + RS   R+ RD     N   +    D++     L+ SD+YL+EILSEKV+T + RR+GRVGVWRPHL+SI E
Subjt:  RSRSSAGRKKRD---IANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGCTCCCTCCCAACTCAGACAAAGCCCGTTCGCGATCCTCCGCCGGAAGAAAGAAGAGAGATATTGCTAATAACAACGGTGCCACTCATCACTCCGACCGATCCGC
CGTCGCAACCAATCTCCTCCTTTCCGATCAGTACCTCTCGGAAATACTCTCCGAGAAGGTTTCCACCCACCGCGGACGGCGGCGCGGTCGTGTCGGCGTTTGGAGGCCTC
ACTTACAGAGTATTTGCGAGTCGCCCGTGAGATCCCACGTGAACCCTCTCCGTTTCGGAAATCCCACTTCCCCGCTGTCCAGGCCGCAGTCTTCCCGCCAGTCAGCGACC
CCACCCCCCCTTCACCGCCCCTTTTCCTGTTGGGCCCAAGCTTCCGACTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCGCTCCCTCCCAACTCAGACAAAGCCCGTTCGCGATCCTCCGCCGGAAGAAAGAAGAGAGATATTGCTAATAACAACGGTGCCACTCATCACTCCGACCGATCCGC
CGTCGCAACCAATCTCCTCCTTTCCGATCAGTACCTCTCGGAAATACTCTCCGAGAAGGTTTCCACCCACCGCGGACGGCGGCGCGGTCGTGTCGGCGTTTGGAGGCCTC
ACTTACAGAGTATTTGCGAGTCGCCCGTGAGATCCCACGTGAACCCTCTCCGTTTCGGAAATCCCACTTCCCCGCTGTCCAGGCCGCAGTCTTCCCGCCAGTCAGCGACC
CCACCCCCCCTTCACCGCCCCTTTTCCTGTTGGGCCCAAGCTTCCGACTAA
Protein sequenceShow/hide protein sequence
MPLPPNSDKARSRSSAGRKKRDIANNNGATHHSDRSAVATNLLLSDQYLSEILSEKVSTHRGRRRGRVGVWRPHLQSICESPVRSHVNPLRFGNPTSPLSRPQSSRQSAT
PPPLHRPFSCWAQASD