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Carg14611 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14611
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein yippee-like
Genome locationCarg_Chr18:2246237..2249680
RNA-Seq ExpressionCarg14611
SyntenyCarg14611
Gene Ontology termsGO:0000151 - ubiquitin ligase complex (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004910 - Yippee/Mis18/Cereblon
IPR034751 - Yippee domain
IPR039058 - Yippee family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146613.1 protein yippee-like At5g53940 isoform X1 [Cucumis sativus]1.9e-6288.19Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLMLSGMH VEDIFCC CG++LGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAYPSSSDMDNP
        ERWRIVEEMMEDLNG+A+P SSDM+NP
Subjt:  ERWRIVEEMMEDLNGEAYPSSSDMDNP

XP_008442812.1 PREDICTED: protein yippee-like At5g53940 [Cucumis melo]2.5e-6287.4Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGR+FLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLMLSGMH VEDIFCC CG++LGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAYPSSSDMDNP
        ERWRIVEEMMEDLNG+A+P SSDM+NP
Subjt:  ERWRIVEEMMEDLNGEAYPSSSDMDNP

XP_022140248.1 protein yippee-like At5g53940 [Momordica charantia]8.5e-6388.19Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNC QGRA+LF++VVNVT+GPKEERLMLSGMHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAYPSSSDMDNP
        ERWRIVEEMMEDLN +A+P SSDM+NP
Subjt:  ERWRIVEEMMEDLNGEAYPSSSDMDNP

XP_022927222.1 protein yippee-like At5g53940 [Cucurbita moschata]2.6e-6489.76Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLMLSGMHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAYPSSSDMDNP
        ERWRIVEEMMEDLNG+A+P SSDM+NP
Subjt:  ERWRIVEEMMEDLNGEAYPSSSDMDNP

XP_022955197.1 protein yippee-like At5g53940 isoform X1 [Cucurbita moschata]2.7e-69100Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAYPSSSDMDNP
        ERWRIVEEMMEDLNGEAYPSSSDMDNP
Subjt:  ERWRIVEEMMEDLNGEAYPSSSDMDNP

TrEMBL top hitse value%identityAlignment
A0A6J1CHK2 Protein yippee-like4.1e-6388.19Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNC QGRA+LF++VVNVT+GPKEERLMLSGMHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAYPSSSDMDNP
        ERWRIVEEMMEDLN +A+P SSDM+NP
Subjt:  ERWRIVEEMMEDLNGEAYPSSSDMDNP

A0A6J1EGK2 Protein yippee-like1.3e-6489.76Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLMLSGMHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAYPSSSDMDNP
        ERWRIVEEMMEDLNG+A+P SSDM+NP
Subjt:  ERWRIVEEMMEDLNGEAYPSSSDMDNP

A0A6J1GSW9 Protein yippee-like1.3e-69100Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAYPSSSDMDNP
        ERWRIVEEMMEDLNGEAYPSSSDMDNP
Subjt:  ERWRIVEEMMEDLNGEAYPSSSDMDNP

A0A6J1K1C3 Protein yippee-like1.3e-69100Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAYPSSSDMDNP
        ERWRIVEEMMEDLNGEAYPSSSDMDNP
Subjt:  ERWRIVEEMMEDLNGEAYPSSSDMDNP

A0A6J1KNK6 Protein yippee-like1.3e-6489.76Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGRVFLVELEGRSY CR+CNNNVALADD+LSRTFNCSQGRA+LF++VVN+TSGPKEERLMLSGMHTVEDIFCCCCG++LGWKYVTTHDKYQKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAYPSSSDMDNP
        ERWRIVEEMMEDLNG+A+P SSDM+NP
Subjt:  ERWRIVEEMMEDLNGEAYPSSSDMDNP

SwissProt top hitse value%identityAlignment
P59234 Protein yippee-like1.2e-3559.05Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGR+F++ LEG+ YSC++C  ++AL+++I+S++F+C  G+A+LF+ VVNVTSG  E R+M++GMHTV DIFC CCG ++GWKY T H+K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER++I
Subjt:  ERWRI

Q9C777 Protein yippee-like At3g112304.3e-3357.14Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGR+FLV LEG+SYSC++C  N+AL DD++S++F    G+A+LF+ VVNV +G KE+R+M++GMHTV DI+C  CG  +GWKY    +K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER+++
Subjt:  ERWRI

Q9FN32 Protein yippee-like At5g539403.5e-4366.1Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGR+F VELEGRSY CR+C  ++AL DD++SR+F+C +G+A+LFN  VN++ GP EERLMLSGMHTV DIFCCCCG+ +GWKY + H+K QKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAY
        ER RIV+E+  DL+ E Y
Subjt:  ERWRIVEEMMEDLNGEAY

Q9LY56 Protein yippee-like At3g558904.0e-3155.24Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGRVF+V+LEG  Y C+ C  +++   DI+S++F C  GRA+LFN+VVNV+ G KE+R+M++G+H V DIFC  CG  +GWKY   H+K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        E ++I
Subjt:  ERWRI

Q9SR97 Protein yippee-like At3g089904.6e-3557.55Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGR+F+++LEG  YSC+YC  + A+ +DI+S++F+C  GRA+LF++VVNVT G KE R+M++G HTV DIFC  CG L+GWKY   +DK QKYKEGKF+L
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIV
        ER++++
Subjt:  ERWRIV

Arabidopsis top hitse value%identityAlignment
AT2G40110.1 Yippee family putative zinc-binding protein3.6e-3558.1Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGR+F+V LEG+ YSC++C  ++A  +DI+S++F+C  G+A+LFN V NV+ G  EERLM++G HTV DIFC  CG ++GWKY T H+K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRI
        ER++I
Subjt:  ERWRI

AT2G40110.2 Yippee family putative zinc-binding protein2.3e-3458.25Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGR+F+V LEG+ YSC++C  ++A  +DI+S++F+C  G+A+LFN V NV+ G  EERLM++G HTV DIFC  CG ++GWKY T H+K QKYKEGK VL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERW
        ER+
Subjt:  ERW

AT3G08990.1 Yippee family putative zinc-binding protein3.2e-3657.55Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGR+F+++LEG  YSC+YC  + A+ +DI+S++F+C  GRA+LF++VVNVT G KE R+M++G HTV DIFC  CG L+GWKY   +DK QKYKEGKF+L
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIV
        ER++++
Subjt:  ERWRIV

AT3G08990.2 Yippee family putative zinc-binding protein3.2e-3657.55Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGR+F+++LEG  YSC+YC  + A+ +DI+S++F+C  GRA+LF++VVNVT G KE R+M++G HTV DIFC  CG L+GWKY   +DK QKYKEGKF+L
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIV
        ER++++
Subjt:  ERWRIV

AT5G53940.1 Yippee family putative zinc-binding protein2.5e-4466.1Show/hide
Query:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL
        MGR+F VELEGRSY CR+C  ++AL DD++SR+F+C +G+A+LFN  VN++ GP EERLMLSGMHTV DIFCCCCG+ +GWKY + H+K QKYKEGKFVL
Subjt:  MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVL

Query:  ERWRIVEEMMEDLNGEAY
        ER RIV+E+  DL+ E Y
Subjt:  ERWRIVEEMMEDLNGEAY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGGTTTTTCTCGTTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAACGTTGCTCTTGCCGATGACATCCTCTCTCGGACTTTCAATTGCAG
CCAAGGGAGGGCGTTCCTTTTCAACAGTGTAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCT
GTTGCGGAGAACTTCTTGGATGGAAATATGTAACTACACACGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATG
GAAGACTTAAATGGAGAGGCTTATCCTAGTTCAAGCGATATGGATAATCCCTAA
mRNA sequenceShow/hide mRNA sequence
CTTGGGATTTTCGGTGGATGAAAGGGGGAAGGAATAATTGAGTATGAGATTGTGAGAGCTTAGGTCTTGAATTTGGGATTTTAGGGTTTAAATGGGTAGGGTTTTTCTCG
TTGAATTGGAAGGCAGGTCTTATAGCTGCCGCTACTGCAATAACAACGTTGCTCTTGCCGATGACATCCTCTCTCGGACTTTCAATTGCAGCCAAGGGAGGGCGTTCCTT
TTCAACAGTGTAGTGAATGTAACATCTGGACCTAAGGAGGAGAGGTTGATGCTTTCTGGTATGCACACCGTGGAGGATATCTTTTGTTGCTGTTGCGGAGAACTTCTTGG
ATGGAAATATGTAACTACACACGACAAATATCAAAAGTACAAGGAAGGGAAGTTTGTTCTTGAGAGATGGAGAATAGTTGAGGAGATGATGGAAGACTTAAATGGAGAGG
CTTATCCTAGTTCAAGCGATATGGATAATCCCTAAAGACCAGTGGGAAACCAAGGCAGCCACTGGAAAAGGAAAAGGCAGGGAAGTAAGTTGTTTGCAGTGCAGTAGAAG
CTCGTGATTAGCTTTTTGGAAGGACAGGAGATGGCCCACCGTATTGACTAATAGAGGATAAAGCAAAGCAGCAAAGGGGCCGCATTGAGGCGTATTGCTTGCTGCTGTTG
CTGCTCGGCTAACCCCGCCGTACACGACGAGTGAGACTGCGGCGGGCTCATTTAAAATGTTATGAATCAGTAAAAGGGGGAATGAAGG
Protein sequenceShow/hide protein sequence
MGRVFLVELEGRSYSCRYCNNNVALADDILSRTFNCSQGRAFLFNSVVNVTSGPKEERLMLSGMHTVEDIFCCCCGELLGWKYVTTHDKYQKYKEGKFVLERWRIVEEMM
EDLNGEAYPSSSDMDNP