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Carg14624 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14624
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionBHLH domain-containing protein
Genome locationCarg_Chr18:2163117..2163956
RNA-Seq ExpressionCarg14624
SyntenyCarg14624
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process)
GO:0090575 - RNA polymerase II transcription factor complex (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR015660 - Achaete-scute transcription factor-related


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573271.1 Transcription factor basic helix-loop-helix 162, partial [Cucurbita argyrosperma subsp. sororia]1.4e-5099.1Show/hide
Query:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF
        MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADR FHKIIAQMVGEGTTSEGAKGERICETVKKF
Subjt:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF

Query:  VSEYKDDQYTV
        VSEYKDDQYTV
Subjt:  VSEYKDDQYTV

KAG7012437.1 hypothetical protein SDJN02_25189 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-51100Show/hide
Query:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF
        MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF
Subjt:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF

Query:  VSEYKDDQYTV
        VSEYKDDQYTV
Subjt:  VSEYKDDQYTV

XP_022994108.1 transcription factor bHLH162-like [Cucurbita maxima]2.6e-4490.09Show/hide
Query:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF
        MGLGEKSTITSENKAR+IVQVEAH VGS LEILLTTGS Y LVLRQIIQLLQENGTEIVDINQSTVA+R FHKIIAQM GEGTT EGAKGERICE VKKF
Subjt:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF

Query:  VSEYKDDQYTV
        VS YKDDQYTV
Subjt:  VSEYKDDQYTV

XP_023542172.1 transcription factor bHLH167-like [Cucurbita pepo subsp. pepo]3.6e-4186.49Show/hide
Query:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF
        MGLGEKSTITSENKARLI+QVEAHRVGS LEILLTTGSVY LVLRQIIQLLQENGTEIVDINQSTVADR FHKIIAQ+       +GA+GERICETVKKF
Subjt:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF

Query:  VSEYKDDQYTV
        VS+YKDDQYTV
Subjt:  VSEYKDDQYTV

XP_023542777.1 uncharacterized protein LOC111802586 [Cucurbita pepo subsp. pepo]7.7e-3676.58Show/hide
Query:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF
        M LGE+S   SE KARL+VQVEAH+VGS LE LLTTGS Y LVL+QI+QLLQENGT+IV IN STV DR FHKIIA+MVGEGTTSE  +GERICETVKKF
Subjt:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF

Query:  VSEYKDDQYTV
        VS+YKD QY V
Subjt:  VSEYKDDQYTV

TrEMBL top hitse value%identityAlignment
A0A6J1GT92 uncharacterized protein LOC1114572294.1e-3574.77Show/hide
Query:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF
        M LGE+S  +SE KARL+VQVEAH+VGS LE LLTT S Y LVL+Q++QLLQENGT+IV IN STV DR FHKIIA+MVGEGTTSE  +GERICETVKKF
Subjt:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF

Query:  VSEYKDDQYTV
        VS+YKD QY V
Subjt:  VSEYKDDQYTV

A0A6J1GVE3 transcription factor bHLH162-like3.5e-2667.59Show/hide
Query:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF
        M LGE+ST         +VQVEA  VGS LE LLTT   Y  +LRQI+QLLQENGTEIV IN+STV DR FHKII QMVGEG  SE A+GERICE VKKF
Subjt:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF

Query:  VSEYKDDQ
        VS+YKD Q
Subjt:  VSEYKDDQ

A0A6J1JZ96 transcription factor bHLH167-like8.1e-3175.79Show/hide
Query:  ENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKFVSEYKD
        E KARL+VQVEAH+VGS LE+LLTTGS Y LVL QI+QLLQENGT+I+ IN ST+ +R FHKI+AQMVGEG +SEG  GERICETVKKFVS+YKD
Subjt:  ENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKFVSEYKD

A0A6J1K2Y3 transcription factor bHLH167-like6.0e-3479Show/hide
Query:  ENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKFVSEYKDDQYTV
        E KARL+VQVEAH+VGS LE+LLTTGS Y  VL QI+QLLQENGT+IV IN STV DR FHKIIA+MVGEGTTSE  KGERICETVKKFVS+YKD QY V
Subjt:  ENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKFVSEYKDDQYTV

A0A6J1K483 transcription factor bHLH162-like1.3e-4490.09Show/hide
Query:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF
        MGLGEKSTITSENKAR+IVQVEAH VGS LEILLTTGS Y LVLRQIIQLLQENGTEIVDINQSTVA+R FHKIIAQM GEGTT EGAKGERICE VKKF
Subjt:  MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKF

Query:  VSEYKDDQYTV
        VS YKDDQYTV
Subjt:  VSEYKDDQYTV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTGGGAGAAAAAAGTACCATCACTAGTGAAAATAAAGCAAGATTAATTGTGCAAGTTGAAGCTCATCGAGTGGGTTCTTTGTTGGAAATTCTTTTGACTACTGG
TTCTGTTTATTCCTTGGTTTTAAGACAAATCATTCAACTCCTTCAAGAAAATGGAACTGAGATTGTCGATATTAACCAATCAACGGTCGCAGATCGAACTTTTCACAAGA
TAATAGCTCAGATGGTGGGAGAAGGGACGACCTCTGAAGGCGCTAAAGGTGAAAGGATTTGTGAGACAGTGAAGAAGTTTGTCTCAGAGTACAAAGATGATCAATACACT
GTTTAA
mRNA sequenceShow/hide mRNA sequence
AGAGATGAAAAGGGCCTTTGTAGTCGAGCTATCATCTCTCGTCACCCAACCACCTATAAGAATCTCAAATCTGCCTGTTTTCGTATCCATACAGCTAGAAAATGCTACAA
ATTAAAACAAGAAGCGTGTGAGAAATTAAAAGAGAGAAACTAATGGGATTGGGAGAAAAAAGTACCATCACTAGTGAAAATAAAGCAAGATTAATTGTGCAAGTTGAAGC
TCATCGAGTGGGTTCTTTGTTGGAAATTCTTTTGACTACTGGTTCTGTTTATTCCTTGGTTTTAAGACAAATCATTCAACTCCTTCAAGAAAATGGAACTGAGATTGTCG
ATATTAACCAATCAACGGTCGCAGATCGAACTTTTCACAAGATAATAGCTCAGATGGTGGGAGAAGGGACGACCTCTGAAGGCGCTAAAGGTGAAAGGATTTGTGAGACA
GTGAAGAAGTTTGTCTCAGAGTACAAAGATGATCAATACACTGTTTAATGTTTTGTCTAAAACATCGATTGATCTTGAAGATTTATGAGGTCGGTCTCTTTTGATTCAAT
GCTTCAAAATCTTAGTATTCAAAACTTTATTTAGTTTGCATTGTAATGTGACGTTTTAGGTTTCAACTCTGTGTTTTCTCTTTTCAACAAATCAGGTCTTTATTTTGATT
TAAACAAGAATTACCATTTAATTTAGATTGAATGAGAGCCAATTCAAATTTCTAA
Protein sequenceShow/hide protein sequence
MGLGEKSTITSENKARLIVQVEAHRVGSLLEILLTTGSVYSLVLRQIIQLLQENGTEIVDINQSTVADRTFHKIIAQMVGEGTTSEGAKGERICETVKKFVSEYKDDQYT
V