; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14636 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14636
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontrafficking protein particle complex subunit 13-like
Genome locationCarg_Chr18:2096812..2098189
RNA-Seq ExpressionCarg14636
SyntenyCarg14636
Gene Ontology termsGO:1990072 - TRAPPIII protein complex (cellular component)
InterPro domainsIPR010378 - Trafficking protein particle complex subunit 13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573256.1 Trafficking protein particle complex subunit 13, partial [Cucurbita argyrosperma subsp. sororia]7.7e-4296.63Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
        MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLE+ +
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
KAG7012425.1 hypothetical protein SDJN02_25177, partial [Cucurbita argyrosperma subsp. argyrosperma]8.2e-44100Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRILL
        MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRILL
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRILL
XP_022955180.1 trafficking protein particle complex subunit 13-like [Cucurbita moschata]7.7e-4296.63Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
        MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLE+ +
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
XP_022994399.1 trafficking protein particle complex subunit 13-like [Cucurbita maxima]5.0e-4194.38Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
        MRLTTQT+RELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRI GIKVLDTTEKKAYDHPLADLE+ +
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
XP_023001719.1 trafficking protein particle complex subunit 13-like isoform X1 [Cucurbita maxima]2.0e-3788.76Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
        MRLTTQ ERELGPFEVWMSQNGSD+EKVVMVNGLQ MVIPRVEP+GSTDFHLNLIATKPGVQRIAGIKV DT EKK+YDHPL DLE+ I
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
TrEMBL top hitse value%identityAlignment
A0A6J1EI59 trafficking protein particle complex subunit 13-like isoform X11.2e-3787.64Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
        MRLTTQ ERELGPFEVWMSQNGSD+EKVVMVNGLQ MVIPRVEP+GSTDFHLNLIATKPGVQRIAGIKV DT EKK+YDHPL DLE+ +
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
A0A6J1GUG1 trafficking protein particle complex subunit 13-like3.7e-4296.63Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
        MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLE+ +
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
A0A6J1K2R5 trafficking protein particle complex subunit 13-like2.4e-4194.38Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
        MRLTTQT+RELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRI GIKVLDTTEKKAYDHPLADLE+ +
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
A0A6J1KLZ6 trafficking protein particle complex subunit 13-like isoform X22.1e-3789.77Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVR
        MRLTTQ ERELGPFEVWMSQNGSD+EKVVMVNGLQ MVIPRVEP+GSTDFHLNLIATKPGVQRIAGIKV DT EKK+YDHPL DLE R
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVR
A0A6J1KNH1 trafficking protein particle complex subunit 13-like isoform X19.5e-3888.76Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
        MRLTTQ ERELGPFEVWMSQNGSD+EKVVMVNGLQ MVIPRVEP+GSTDFHLNLIATKPGVQRIAGIKV DT EKK+YDHPL DLE+ I
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRI
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G47960.1 unknown protein4.2e-2256.32Show/hide
Query:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEV
        + LT QT+R+LGPFEV +SQ+ +  EK V +NGLQ +++PR+E +GS DF LNLIA+K GVQ+IAGI  LDT EKK Y+  + D+E+
Subjt:  MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGTCTCACTACACAGACTGAGAGGGAATTGGGCCCTTTTGAGGTTTGGATGTCGCAAAATGGTTCAGACGATGAAAAAGTTGTTATGGTTAATGGTCTACAGAAAAT
GGTCATACCAAGAGTTGAGCCATATGGTTCCACAGATTTCCACCTGAACCTCATTGCCACTAAACCTGGAGTTCAGAGAATCGCCGGCATTAAAGTCCTTGACACAACGG
AGAAGAAAGCTTATGATCACCCTTTGGCAGATCTAGAGGTTAGAATTCTCCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGCGTCTCACTACACAGACTGAGAGGGAATTGGGCCCTTTTGAGGTTTGGATGTCGCAAAATGGTTCAGACGATGAAAAAGTTGTTATGGTTAATGGTCTACAGAAAAT
GGTCATACCAAGAGTTGAGCCATATGGTTCCACAGATTTCCACCTGAACCTCATTGCCACTAAACCTGGAGTTCAGAGAATCGCCGGCATTAAAGTCCTTGACACAACGG
AGAAGAAAGCTTATGATCACCCTTTGGCAGATCTAGAGGTTAGAATTCTCCTTTAATTGATAGCAGCATTTTAATTGCCTTGCACGTAAATAAAAGATCTTGTCTAGTCA
CGTTTACAATTTTGATGAATACACTGAATGAATTGGTTATGTCAACTAGGAAGCATGAATACGATTTGACTAGTATCTGTATTGGACATGTGTTATGATTCCTTCTCTTC
TTTTATGCATTGAGTGCTTCTCCTATATAGGAAGACTATGTAACATAAAATTTGGATA
Protein sequenceShow/hide protein sequence
MRLTTQTERELGPFEVWMSQNGSDDEKVVMVNGLQKMVIPRVEPYGSTDFHLNLIATKPGVQRIAGIKVLDTTEKKAYDHPLADLEVRILL