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Carg14660 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14660
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionB-box type zinc finger family protein
Genome locationCarg_Chr18:1913413..1913763
RNA-Seq ExpressionCarg14660
SyntenyCarg14660
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000315 - B-box-type zinc finger


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652697.1 hypothetical protein Csa_014317 [Cucumis sativus]1.4e-3566.67Show/hide
Query:  KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQN--NVADNHQDSSHG--------YRH
        KCELC  RAN YCESD+++LCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTATG KL PT+S+CQ C+  QN  ++   HQD  H           H
Subjt:  KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQN--NVADNHQDSSHG--------YRH

Query:  DDNDDDENQVVPLSPPPVSS
         + DD+ENQVVPLSPPPVSS
Subjt:  DDNDDDENQVVPLSPPPVSS

KAG6573228.1 putative zinc finger protein CONSTANS-LIKE 11, partial [Cucurbita argyrosperma subsp. sororia]3.3e-61100Show/hide
Query:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDE
        MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDE
Subjt:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDE

Query:  NQVVPLSPPPVSSSSK
        NQVVPLSPPPVSSSSK
Subjt:  NQVVPLSPPPVSSSSK

XP_022954438.1 zinc finger protein CONSTANS-LIKE 9-like [Cucurbita moschata]1.5e-5089.66Show/hide
Query:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDE
        MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDS        +DD+E
Subjt:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDE

Query:  NQVVPLSPPPVSSSSK
         QVVPLSP PVSSSSK
Subjt:  NQVVPLSPPPVSSSSK

XP_022994111.1 zinc finger protein CONSTANS-LIKE 9-like [Cucurbita maxima]2.7e-5594.07Show/hide
Query:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRH--DDNDD
        MKKKCELC SRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQS TPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS GYR   DDN+D
Subjt:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRH--DDNDD

Query:  DENQVVPLSPPPVSSSSK
        DENQVVPLSPPPVSSSSK
Subjt:  DENQVVPLSPPPVSSSSK

XP_023542180.1 zinc finger protein CONSTANS-LIKE 9-like [Cucurbita pepo subsp. pepo]2.8e-5796.58Show/hide
Query:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHD-DNDDD
        MK KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS GYR D DNDDD
Subjt:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHD-DNDDD

Query:  ENQVVPLSPPPVSSSSK
        ENQVVPLSPPPVSSSSK
Subjt:  ENQVVPLSPPPVSSSSK

TrEMBL top hitse value%identityAlignment
A0A0A0LS80 B box-type domain-containing protein6.7e-3666.67Show/hide
Query:  KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQN--NVADNHQDSSHG--------YRH
        KCELC  RAN YCESD+++LCWSCDANVHSANFIVEKHSR LLC ICQSPTPWTATG KL PT+S+CQ C+  QN  ++   HQD  H           H
Subjt:  KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQN--NVADNHQDSSHG--------YRH

Query:  DDNDDDENQVVPLSPPPVSS
         + DD+ENQVVPLSPPPVSS
Subjt:  DDNDDDENQVVPLSPPPVSS

A0A1S3B4I3 B-box zinc finger protein 32-like7.4e-3564.23Show/hide
Query:  KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQN--NVADNHQDSSHG----------Y
        KCELC  RAN YCESD+A+LCWSCD+NVHSANFIVEKHSR LLC ICQSPTPWTATG KL PT+S+CQ C+  QN  ++  +HQD  H            
Subjt:  KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQN--NVADNHQDSSHG----------Y

Query:  RHDDNDDDENQVVPLSPPPVSSS
         H   DD+ENQVVPLSPPP  SS
Subjt:  RHDDNDDDENQVVPLSPPPVSSS

A0A5A7UTR2 B-box zinc finger protein 32-like7.4e-3564.23Show/hide
Query:  KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQN--NVADNHQDSSHG----------Y
        KCELC  RAN YCESD+A+LCWSCD+NVHSANFIVEKHSR LLC ICQSPTPWTATG KL PT+S+CQ C+  QN  ++  +HQD  H            
Subjt:  KCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQN--NVADNHQDSSHG----------Y

Query:  RHDDNDDDENQVVPLSPPPVSSS
         H   DD+ENQVVPLSPPP  SS
Subjt:  RHDDNDDDENQVVPLSPPPVSSS

A0A6J1GR34 zinc finger protein CONSTANS-LIKE 9-like7.3e-5189.66Show/hide
Query:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDE
        MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDS        +DD+E
Subjt:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDE

Query:  NQVVPLSPPPVSSSSK
         QVVPLSP PVSSSSK
Subjt:  NQVVPLSPPPVSSSSK

A0A6J1JY69 zinc finger protein CONSTANS-LIKE 9-like1.3e-5594.07Show/hide
Query:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRH--DDNDD
        MKKKCELC SRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQS TPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS GYR   DDN+D
Subjt:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRH--DDNDD

Query:  DENQVVPLSPPPVSSSSK
        DENQVVPLSPPPVSSSSK
Subjt:  DENQVVPLSPPPVSSSSK

SwissProt top hitse value%identityAlignment
O23379 Putative zinc finger protein CONSTANS-LIKE 114.6e-1042.67Show/hide
Query:  MKKKCELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQ-SPTPWTATGRKLSPTISVCQSC
        M+ +C+ C T +A  YC+SD A LC +CD NVHSAN + ++H+R+LLC  C   PT        ++  +S+CQ C
Subjt:  MKKKCELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQ-SPTPWTATGRKLSPTISVCQSC

Q39057 Zinc finger protein CONSTANS7.4e-0837.65Show/hide
Query:  KKCELCTSRANT-YCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQ-SPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQ
        + C+ C S A T YC +D A LC SCDA VHSAN +  +H R  +C  C+ +P  +       S   + C S +++ N +A  HQ
Subjt:  KKCELCTSRANT-YCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQ-SPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQ

Q9LJ44 Zinc finger protein CONSTANS-LIKE 121.8e-0942.17Show/hide
Query:  MKKKCELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVAD
        M+ KC+ C TS+A  YC+SD A LC +CD +VHSAN +  +H R+L+C  C S     A  R L   +S CQ C   ++N ++
Subjt:  MKKKCELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVAD

Q9LUA9 Zinc finger protein CONSTANS-LIKE 101.1e-0839.78Show/hide
Query:  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDN
        C+ C   R+  YC SD A LC SCD NVHSAN + ++HSRTL+C  C +     A+ R     +S+CQ+C +   +   N   +SH  R   N
Subjt:  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDN

Q9SSE5 Zinc finger protein CONSTANS-LIKE 91.2e-1042.35Show/hide
Query:  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS
        C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +   +S+CQ+C  + +N ++N+  SS
Subjt:  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS

Arabidopsis top hitse value%identityAlignment
AT3G07650.1 CONSTANS-like 98.7e-1242.35Show/hide
Query:  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS
        C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +   +S+CQ+C  + +N ++N+  SS
Subjt:  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS

AT3G07650.2 CONSTANS-like 98.7e-1242.35Show/hide
Query:  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS
        C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +   +S+CQ+C  + +N ++N+  SS
Subjt:  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS

AT3G07650.3 CONSTANS-like 98.7e-1242.35Show/hide
Query:  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS
        C+ C   R+  YC SD A LC SCD +VHSAN + ++HSRTL+C  C +     AT R +   +S+CQ+C  + +N ++N+  SS
Subjt:  CELC-TSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSS

AT4G27310.1 B-box type zinc finger family protein5.2e-2540.24Show/hide
Query:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCL--------------------------
        M KKC+LC   A  YCESDQA+LCW CD  VH ANF+V KH+R LLC  CQS TPW ATG +L PT SVC+SC+                          
Subjt:  MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCL--------------------------

Query:  ---------------NAQNNVADNHQDSSHGYRHDDNDDD---------ENQVVPLSP----PPVSSSS
                       +A++   D  +D    Y  D+++DD         ENQVVP S     PPV SSS
Subjt:  ---------------NAQNNVADNHQDSSHGYRHDDNDDD---------ENQVVPLSP----PPVSSSS

AT5G54470.1 B-box type zinc finger family protein3.6e-2647.48Show/hide
Query:  KKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCL----NAQNNVADNHQ------------
        KKKCELC   A  YCESDQA+LCW CD  VH ANF+V KH R LLC  CQS TPW A+G  L PT+S+C+SCL    N  +++A   Q            
Subjt:  KKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCL----NAQNNVADNHQ------------

Query:  DSSHGYRHDDNDDD-----ENQVVPLSP----PPVSSSS
        D +  Y  + ++D+     ENQVVP +     P VSSSS
Subjt:  DSSHGYRHDDNDDD-----ENQVVPLSP----PPVSSSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGAAGTGTGAGCTTTGCACTTCAAGAGCCAATACATATTGTGAATCCGACCAAGCCAATTTGTGTTGGAGTTGCGACGCCAATGTTCATTCAGCCAACTTCAT
CGTCGAGAAGCACTCCCGCACGTTGCTATGCCATATTTGCCAATCCCCCACGCCTTGGACTGCCACTGGCCGCAAGCTTTCCCCTACCATCTCCGTTTGTCAATCTTGTC
TTAATGCCCAAAATAACGTCGCCGACAACCATCAAGATTCCAGCCATGGATATCGTCATGACGACAACGACGACGACGAGAATCAAGTGGTTCCATTGTCGCCGCCACCG
GTTTCAAGCTCGTCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGAAGTGTGAGCTTTGCACTTCAAGAGCCAATACATATTGTGAATCCGACCAAGCCAATTTGTGTTGGAGTTGCGACGCCAATGTTCATTCAGCCAACTTCAT
CGTCGAGAAGCACTCCCGCACGTTGCTATGCCATATTTGCCAATCCCCCACGCCTTGGACTGCCACTGGCCGCAAGCTTTCCCCTACCATCTCCGTTTGTCAATCTTGTC
TTAATGCCCAAAATAACGTCGCCGACAACCATCAAGATTCCAGCCATGGATATCGTCATGACGACAACGACGACGACGAGAATCAAGTGGTTCCATTGTCGCCGCCACCG
GTTTCAAGCTCGTCAAAATGA
Protein sequenceShow/hide protein sequence
MKKKCELCTSRANTYCESDQANLCWSCDANVHSANFIVEKHSRTLLCHICQSPTPWTATGRKLSPTISVCQSCLNAQNNVADNHQDSSHGYRHDDNDDDENQVVPLSPPP
VSSSSK