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Carg14661 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14661
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCalcium-binding EF-hand family protein
Genome locationCarg_Chr18:1910311..1910646
RNA-Seq ExpressionCarg14661
SyntenyCarg14661
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site
IPR044205 - Calcium-binding protein KIC/PBP1/KRP1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056934.1 calcium-binding protein PBP1 [Cucumis melo var. makuwa]5.2e-3271.43Show/hide
Query:  SRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST
        S NGVV+F+DFFP M+EKLGVKGF++ELR GF LLMDKEKGVITAESLR  M F G  L++EE M MVREGDLDGDGALSEAEF +LM KLSPG M LS+
Subjt:  SRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST

Query:  HLFQQKF--RKF
          F Q    RKF
Subjt:  HLFQQKF--RKF

KAE8652697.1 hypothetical protein Csa_014317 [Cucumis sativus]6.8e-3272.38Show/hide
Query:  SRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST
        S   VVLF+DFFP M+EKLG KGF++ELRYGFRLLMDKEKGVITAESLR  M F G  L++EE M MV+EGDLDGDGALSEAEF +LM KLSPG M LS+
Subjt:  SRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST

Query:  HLFQQ
          F Q
Subjt:  HLFQQ

KAG6573227.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. sororia]3.1e-5399.1Show/hide
Query:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST
        MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKM FLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST
Subjt:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST

Query:  HLFQQKFRKFK
        HLFQQKFRKFK
Subjt:  HLFQQKFRKFK

KAG7012400.1 Calcium-binding protein KIC, partial [Cucurbita argyrosperma subsp. argyrosperma]4.8e-54100Show/hide
Query:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST
        MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST
Subjt:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST

Query:  HLFQQKFRKFK
        HLFQQKFRKFK
Subjt:  HLFQQKFRKFK

XP_022994112.1 calcium-binding protein KIC-like [Cucurbita maxima]3.8e-3595.24Show/hide
Query:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLDEEEAMGMVREGDLDGDGALSEAEF
        MGSRN VVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKM FLGL+EEEAMGMV EGDLDGDGALSEAEF
Subjt:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLDEEEAMGMVREGDLDGDGALSEAEF

TrEMBL top hitse value%identityAlignment
A0A067GJU9 EF-hand domain-containing protein1.3e-2866.04Show/hide
Query:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGL---DEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQ
        M S N  V+F DFFPAMVEKLG +GFM+EL  GFRLLMD++KG+IT ESL+     LGL    +EE M M+REGDLDGDGAL+E EFC LMF+LSPGLM+
Subjt:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGL---DEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQ

Query:  LSTHLF
         ST+LF
Subjt:  LSTHLF

A0A0A0LV00 EF-hand domain-containing protein3.3e-3270.54Show/hide
Query:  SRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST
        S   VVLF+DFFP M+EKLG KGF++ELRYGFRLLMDKEKGVITAESLR  M F G  L++EE M MV+EGDLDGDGALSEAEF +LM KLSPG M LS+
Subjt:  SRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST

Query:  HLFQQKF--RKF
          F Q    RKF
Subjt:  HLFQQKF--RKF

A0A5A7UNY8 Calcium-binding protein PBP12.5e-3271.43Show/hide
Query:  SRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST
        S NGVV+F+DFFP M+EKLGVKGF++ELR GF LLMDKEKGVITAESLR  M F G  L++EE M MVREGDLDGDGALSEAEF +LM KLSPG M LS+
Subjt:  SRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLST

Query:  HLFQQKF--RKF
          F Q    RKF
Subjt:  HLFQQKF--RKF

A0A6J1JUT4 calcium-binding protein KIC-like1.9e-3595.24Show/hide
Query:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLDEEEAMGMVREGDLDGDGALSEAEF
        MGSRN VVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKM FLGL+EEEAMGMV EGDLDGDGALSEAEF
Subjt:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLDEEEAMGMVREGDLDGDGALSEAEF

A0A7N2LV84 EF-hand domain-containing protein1.5e-2967.59Show/hide
Query:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGL---DEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQ
        MGSRNGVV F DFFPAMVEKLG +GFM+EL  GFRLLMD+EKGVIT +SL+     LGL    +EE M M+REGDLDGDGAL+E EFC LMF+LSPGLM+
Subjt:  MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGL---DEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQ

Query:  LSTHLFQQ
         S+ L ++
Subjt:  LSTHLFQQ

SwissProt top hitse value%identityAlignment
O81831 Calcium-binding protein KRP14.4e-1848.11Show/hide
Query:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFL----GLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLS----TH
        F DF P M   LG +G + EL  GF LLMD+EKGVIT ESLR     +     L +E+   M++EGD D DGAL++ EFC+LMF+LSP LM+ S    T 
Subjt:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFL----GLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLS----TH

Query:  LFQQKF
        + +++F
Subjt:  LFQQKF

P0DH95 Calmodulin-12.7e-0738.37Show/hide
Query:  NGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLM
        NG + F +F   M +K+      EEL+  FR+    + G I+A  LR  M  LG  L +EE   M+RE D+DGDG ++  EF  +M
Subjt:  NGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLM

P41208 Centrin-25.4e-0839.33Show/hide
Query:  GVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLS
        G + F DF   M +K+  K   EE+   F+L  D E G I+ ++L+   + LG  L +EE   M+ E D DGDG +SE EF  +M K S
Subjt:  GVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLS

Q9LSQ6 Calcium-binding protein PBP18.1e-2050Show/hide
Query:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLR----TKMEFLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLS----TH
        F+DFFP M  KLG +G +EE+  GF LLMDK+KGVIT ESLR    T +    L +++   M+ EGD D DGAL++ EFC+LMF+LSP LM+ S    T 
Subjt:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLR----TKMEFLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLS----TH

Query:  LFQQKF
        + +++F
Subjt:  LFQQKF

Q9ZPX9 Calcium-binding protein KIC1.1e-1953.85Show/hide
Query:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLD---EEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQ
        + D  P M EK+ V+ F+ EL  GF LL D E+ +ITAESLR     LG++   +E+A GMVREGDLDGDGAL++ EFC+LM +LSP +M+
Subjt:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLD---EEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQ

Arabidopsis top hitse value%identityAlignment
AT1G66410.1 calmodulin 41.9e-0838.37Show/hide
Query:  NGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLM
        NG + F +F   M +K+      EEL+  FR+    + G I+A  LR  M  LG  L +EE   M+RE D+DGDG ++  EF  +M
Subjt:  NGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLM

AT1G66410.2 calmodulin 41.9e-0838.37Show/hide
Query:  NGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLM
        NG + F +F   M +K+      EEL+  FR+    + G I+A  LR  M  LG  L +EE   M+RE D+DGDG ++  EF  +M
Subjt:  NGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLG--LDEEEAMGMVREGDLDGDGALSEAEFCMLM

AT2G46600.1 Calcium-binding EF-hand family protein7.5e-2153.85Show/hide
Query:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLD---EEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQ
        + D  P M EK+ V+ F+ EL  GF LL D E+ +ITAESLR     LG++   +E+A GMVREGDLDGDGAL++ EFC+LM +LSP +M+
Subjt:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLD---EEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQ

AT4G27280.1 Calcium-binding EF-hand family protein3.1e-1948.11Show/hide
Query:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFL----GLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLS----TH
        F DF P M   LG +G + EL  GF LLMD+EKGVIT ESLR     +     L +E+   M++EGD D DGAL++ EFC+LMF+LSP LM+ S    T 
Subjt:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFL----GLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLS----TH

Query:  LFQQKF
        + +++F
Subjt:  LFQQKF

AT5G54490.1 pinoid-binding protein 15.7e-2150Show/hide
Query:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLR----TKMEFLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLS----TH
        F+DFFP M  KLG +G +EE+  GF LLMDK+KGVIT ESLR    T +    L +++   M+ EGD D DGAL++ EFC+LMF+LSP LM+ S    T 
Subjt:  FRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLR----TKMEFLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLS----TH

Query:  LFQQKF
        + +++F
Subjt:  LFQQKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGTCAAGAAACGGGGTCGTTTTGTTCAGAGATTTCTTCCCTGCAATGGTGGAGAAACTTGGAGTAAAAGGGTTTATGGAGGAACTGAGATATGGGTTTCGTTTGCT
TATGGATAAAGAAAAAGGGGTTATAACGGCAGAGAGCTTAAGAACAAAGATGGAGTTTTTGGGATTGGATGAGGAAGAAGCTATGGGGATGGTGAGAGAAGGAGATTTGG
ATGGAGATGGTGCATTGAGTGAGGCTGAATTTTGTATGCTCATGTTCAAACTTAGCCCTGGATTGATGCAACTCTCTACACATTTATTTCAGCAAAAGTTTAGGAAATTT
AAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGGGTCAAGAAACGGGGTCGTTTTGTTCAGAGATTTCTTCCCTGCAATGGTGGAGAAACTTGGAGTAAAAGGGTTTATGGAGGAACTGAGATATGGGTTTCGTTTGCT
TATGGATAAAGAAAAAGGGGTTATAACGGCAGAGAGCTTAAGAACAAAGATGGAGTTTTTGGGATTGGATGAGGAAGAAGCTATGGGGATGGTGAGAGAAGGAGATTTGG
ATGGAGATGGTGCATTGAGTGAGGCTGAATTTTGTATGCTCATGTTCAAACTTAGCCCTGGATTGATGCAACTCTCTACACATTTATTTCAGCAAAAGTTTAGGAAATTT
AAATAG
Protein sequenceShow/hide protein sequence
MGSRNGVVLFRDFFPAMVEKLGVKGFMEELRYGFRLLMDKEKGVITAESLRTKMEFLGLDEEEAMGMVREGDLDGDGALSEAEFCMLMFKLSPGLMQLSTHLFQQKFRKF
K