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Carg14665 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14665
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNDR1/HIN1-like protein 12
Genome locationCarg_Chr01:9546141..9547669
RNA-Seq ExpressionCarg14665
SyntenyCarg14665
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6586015.1 hypothetical protein SDJN03_18748, partial [Cucurbita argyrosperma subsp. sororia]4.4e-10996.74Show/hide
Query:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELH      YIINGWISK RLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

KAG7037378.1 hypothetical protein SDJN02_01003, partial [Cucurbita argyrosperma subsp. argyrosperma]4.3e-112100Show/hide
Query:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLYIINGWISKRRLMEIYCNRHMLKINGSTP
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLYIINGWISKRRLMEIYCNRHMLKINGSTP
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLYIINGWISKRRLMEIYCNRHMLKINGSTP

Query:  LDNIKCNVDL
        LDNIKCNVDL
Subjt:  LDNIKCNVDL

XP_022937554.1 uncharacterized protein LOC111443928 [Cucurbita moschata]1.3e-10896.28Show/hide
Query:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSSTTNQPDQASSSSST V+PPKR SSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL     YIINGWISKRRLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

XP_022969530.1 uncharacterized protein LOC111468519 [Cucurbita maxima]8.7e-10593.49Show/hide
Query:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSST+ QPDQASSSSSTIV+PPKRASS GQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLH LTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNL VLSPTIPIDFVYPLPRLQEKVKFDGISPEL+L     YIINGW+SK RLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

XP_023537505.1 uncharacterized protein LOC111798522 [Cucurbita pepo subsp. pepo]1.4e-10292.09Show/hide
Query:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSSTTNQPDQ+SSSSSTIV+PPKR SS GQHRTTNRTR+LRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYM MTINEMGR FEMV+ NFSQVPGNL VLSPTIPIDFVYPLPRLQEKVKFDGISPEL L     YIINGWISKRR MEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

TrEMBL top hitse value%identityAlignment
A0A0A0LSV0 Uncharacterized protein6.0e-4348.08Show/hide
Query:  PDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAA
        P   SSSSS      K  S   +H T  RTRVLRI GR++LGLM+LV +A++ CWL+V P+ P   +E G V  HSLTDRKLNA+++F + S+NPNKKA+
Subjt:  PDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAA

Query:  IHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKINGSTPLD
        I +D M M +++MG  F   + +F+Q P N  VL+ TI  +F+YP   ++E +K +GISPEL       YI+  W S+ RL+E+YC+   LK N ST  D
Subjt:  IHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKINGSTPLD

Query:  NIKCNVDL
        N KC VDL
Subjt:  NIKCNVDL

A0A6J1FBI3 uncharacterized protein LOC1114439286.3e-10996.28Show/hide
Query:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSSTTNQPDQASSSSST V+PPKR SSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL     YIINGWISKRRLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

A0A6J1HJ52 uncharacterized protein At1g08160-like1.6e-5654.03Show/hide
Query:  TNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNK
        +N  ++ASSS+++I+  PK +S   QH T  RT+++RIIGRS+L +M LVGLA+V CWLVV PK P   LE G VT HSLTDRKLNAS+SF I+S+NPNK
Subjt:  TNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNK

Query:  KAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKINGST
        +A+IH+D M MT+++MG+ F   +  F+Q PGN   L+PT+ ++F+YP  ++++ +  DG++PELH      YI+  W SKRR +EIYC+R  LKINGST
Subjt:  KAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKINGST

Query:  PLDNIKCNVDL
        P DN KC VDL
Subjt:  PLDNIKCNVDL

A0A6J1I064 uncharacterized protein LOC1114685194.2e-10593.49Show/hide
Query:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF
        MSST+ QPDQASSSSSTIV+PPKRASS GQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLH LTDRKLNASVSFHIRSF
Subjt:  MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSF

Query:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI
        NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNL VLSPTIPIDFVYPLPRLQEKVKFDGISPEL+L     YIINGW+SK RLMEIYCNRHMLKI
Subjt:  NPNKKAAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKI

Query:  NGSTPLDNIKCNVDL
        NGSTPLDNIKCNVDL
Subjt:  NGSTPLDNIKCNVDL

A0A6J1I0B9 uncharacterized protein At1g08160-like1.0e-5553.81Show/hide
Query:  NQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKK
        N   +ASSSS++I+  PK +    QH T  RT+++RIIGRS+L +M LVGLA+V CWLVV PK P   LE G VT HSLTDRKLNAS+SF I+S+NPNK+
Subjt:  NQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKK

Query:  AAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKINGSTP
        A+IH+D M MT+++MG+ F   +  F+Q+PGN   L+PT+ ++F+YP  ++++ +  +G++PELH      YI+  W SKRR +EIYC+R  LKINGSTP
Subjt:  AAIHIDYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHL-----YIINGWISKRRLMEIYCNRHMLKINGSTP

Query:  LDNIKCNVDL
         DN KC VDL
Subjt:  LDNIKCNVDL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G08160.1 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family1.4e-0426.29Show/hide
Query:  IIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSL--TDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEMGRKFEMVMRN---FSQVPG
        I+   +LGL  LVGLA++  +L + PK+ ++++E   V   ++   D  +NA  S+ I+S+NP K  ++   Y  M I+       +  +N   F Q P 
Subjt:  IIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSL--TDRKLNASVSFHIRSFNPNKKAAIHIDYMMMTINEMGRKFEMVMRN---FSQVPG

Query:  N-----LIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLYI-----INGWI--SKRRLMEIYCNRHMLKINGST
        N       ++S  + +          EK K    + E+ +YI        WI  S+RR ++  C   M+ +  S+
Subjt:  N-----LIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLYI-----INGWI--SKRRLMEIYCNRHMLKINGST


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCTCCACTACTAACCAACCAGATCAAGCATCATCATCATCATCCACCATTGTCCGGCCACCAAAACGAGCTAGCTCCTATGGGCAGCATAGGACAACAAACCGGAC
AAGGGTATTGAGAATCATAGGAAGAAGCATGTTGGGCTTAATGGTCCTTGTCGGGCTTGCACTAGTTACTTGTTGGCTTGTTGTGACCCCCAAGAAACCAGTTTTCAGCT
TGGAAAGAGGCGTTGTTACACTCCATAGTTTAACCGACAGGAAGCTCAATGCCTCCGTTTCTTTCCACATTAGAAGCTTCAACCCCAACAAGAAAGCCGCCATCCACATT
GATTATATGATGATGACAATCAATGAGATGGGCAGGAAGTTCGAGATGGTCATGCGCAACTTCTCCCAGGTGCCGGGAAACCTAATCGTCTTGTCCCCGACCATCCCTAT
CGACTTCGTATACCCATTGCCTCGGTTGCAAGAGAAGGTGAAGTTTGATGGGATCAGTCCCGAGCTTCACTTATACATTATTAATGGATGGATATCAAAACGTCGATTGA
TGGAGATCTATTGTAATCGTCACATGCTTAAGATCAATGGTTCGACACCTTTGGATAATATCAAATGCAATGTGGATCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGCTCCACTACTAACCAACCAGATCAAGCATCATCATCATCATCCACCATTGTCCGGCCACCAAAACGAGCTAGCTCCTATGGGCAGCATAGGACAACAAACCGGAC
AAGGGTATTGAGAATCATAGGAAGAAGCATGTTGGGCTTAATGGTCCTTGTCGGGCTTGCACTAGTTACTTGTTGGCTTGTTGTGACCCCCAAGAAACCAGTTTTCAGCT
TGGAAAGAGGCGTTGTTACACTCCATAGTTTAACCGACAGGAAGCTCAATGCCTCCGTTTCTTTCCACATTAGAAGCTTCAACCCCAACAAGAAAGCCGCCATCCACATT
GATTATATGATGATGACAATCAATGAGATGGGCAGGAAGTTCGAGATGGTCATGCGCAACTTCTCCCAGGTGCCGGGAAACCTAATCGTCTTGTCCCCGACCATCCCTAT
CGACTTCGTATACCCATTGCCTCGGTTGCAAGAGAAGGTGAAGTTTGATGGGATCAGTCCCGAGCTTCACTTATACATTATTAATGGATGGATATCAAAACGTCGATTGA
TGGAGATCTATTGTAATCGTCACATGCTTAAGATCAATGGTTCGACACCTTTGGATAATATCAAATGCAATGTGGATCTTTGA
Protein sequenceShow/hide protein sequence
MSSTTNQPDQASSSSSTIVRPPKRASSYGQHRTTNRTRVLRIIGRSMLGLMVLVGLALVTCWLVVTPKKPVFSLERGVVTLHSLTDRKLNASVSFHIRSFNPNKKAAIHI
DYMMMTINEMGRKFEMVMRNFSQVPGNLIVLSPTIPIDFVYPLPRLQEKVKFDGISPELHLYIINGWISKRRLMEIYCNRHMLKINGSTPLDNIKCNVDL