CuGenDBv2

Gene ID	Carg14671
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	ARM repeat superfamily protein
Genome location	Carg_Chr01:9602365..9603098
RNA-Seq Expression	Carg14671
Synteny	Carg14671
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6603255.1 hypothetical protein SDJN03_03864, partial [Cucurbita argyrosperma subsp. sororia]

2.5e-83

84.97

Show/hide

Query:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV
        MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASL                             DSLDQSLWFLHKYV
Subjt:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV

Query:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
        RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
Subjt:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG

KAG7037383.1 hypothetical protein SDJN02_01008, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.9e-119

100

Show/hide

Query:  PSIVRPSFSISAVCSALLGIPMEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTL
        PSIVRPSFSISAVCSALLGIPMEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTL
Subjt:  PSIVRPSFSISAVCSALLGIPMEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTL

Query:  MYCTGSTDSLDQSLWFLHKYVRDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSL
        MYCTGSTDSLDQSLWFLHKYVRDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSL
Subjt:  MYCTGSTDSLDQSLWFLHKYVRDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSL

Query:  VEFESVPTELSLNGAD
        VEFESVPTELSLNGAD
Subjt:  VEFESVPTELSLNGAD

XP_023543533.1 uncharacterized protein LOC111803391 isoform X1 [Cucurbita pepo subsp. pepo]

4.3e-83

83.94

Show/hide

Query:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV
        MEDDEGELLLWKSDSAPQSMVS+TVGRVMATLLAARPKKLHDAVSGLSPDHRHGASL                             DSLDQSLWFLHKYV
Subjt:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV

Query:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
        RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLAD+IVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
Subjt:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG

XP_023543534.1 uncharacterized protein LOC111803391 isoform X2 [Cucurbita pepo subsp. pepo]

4.3e-83

83.94

Show/hide

Query:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV
        MEDDEGELLLWKSDSAPQSMVS+TVGRVMATLLAARPKKLHDAVSGLSPDHRHGASL                             DSLDQSLWFLHKYV
Subjt:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV

Query:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
        RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLAD+IVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
Subjt:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG

XP_023543535.1 uncharacterized protein LOC111803391 isoform X3 [Cucurbita pepo subsp. pepo]

4.3e-83

83.94

Show/hide

Query:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV
        MEDDEGELLLWKSDSAPQSMVS+TVGRVMATLLAARPKKLHDAVSGLSPDHRHGASL                             DSLDQSLWFLHKYV
Subjt:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV

Query:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
        RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLAD+IVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
Subjt:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DUA0 uncharacterized protein LOC103486160 isoform X5

3.0e-74

74.61

Show/hide

Query:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV
        ME+DEGELLLWKSD AP+SMVSVTVGRVMATLL ARPKKLH+AVSGLSPDHR GAS                            S DS+ QSLWFLH+YV
Subjt:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV

Query:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
        +DAVQNH SLDEIL+PMIEH LR KDKNWKRGGQV+VLLNWLFLDELTFQ+LIKN+AD+IVRKDDRYVALGWCILVRSLVEFESVP EL LNG
Subjt:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG

A0A1S4DUA6 uncharacterized protein LOC103486160 isoform X10

3.0e-74

74.61

Show/hide

Query:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV
        ME+DEGELLLWKSD AP+SMVSVTVGRVMATLL ARPKKLH+AVSGLSPDHR GAS                            S DS+ QSLWFLH+YV
Subjt:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV

Query:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
        +DAVQNH SLDEIL+PMIEH LR KDKNWKRGGQV+VLLNWLFLDELTFQ+LIKN+AD+IVRKDDRYVALGWCILVRSLVEFESVP EL LNG
Subjt:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG

A0A5A7UYA3 Putative ARM repeat superfamily protein

3.0e-74

74.61

Show/hide

Query:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV
        ME+DEGELLLWKSD AP+SMVSVTVGRVMATLL ARPKKLH+AVSGLSPDHR GAS                            S DS+ QSLWFLH+YV
Subjt:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV

Query:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
        +DAVQNH SLDEIL+PMIEH LR KDKNWKRGGQV+VLLNWLFLDELTFQ+LIKN+AD+IVRKDDRYVALGWCILVRSLVEFESVP EL LNG
Subjt:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG

A0A6J1EPJ3 uncharacterized protein LOC111435467

6.1e-83

83.94

Show/hide

Query:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV
        MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASL                             DSLDQSLWFLHKYV
Subjt:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV

Query:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
        RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLAD+IVRKDDRYVALGWCILVRSLVEFESVP ELSLNG
Subjt:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG

A0A6J1HVT8 uncharacterized protein LOC111467138

9.1e-79

80.83

Show/hide

Query:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV
        ME DE ELLLWKSDS+PQSMVSVTVGRVMATLLAARPKKLHDAV GLSP+HRHGASL                             DSLDQSLWFLHKYV
Subjt:  MEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYV

Query:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG
        RDAVQNHASLDEILV MIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLAD+IVRKDDRYVALGWCILVRSLVEFESVP+ELSLNG
Subjt:  RDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNG

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G57570.1 ARM repeat superfamily protein

1.0e-37

46.75

Show/hide

Query:  SAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYVRDAVQNHASLDEIL
        S P+S+VSVTV R M+TLL+ARPKKL +++S L+PD + G S                               S+D++LWFL K V DA +   ++ EIL
Subjt:  SAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYVRDAVQNHASLDEIL

Query:  VPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFE
        VP+IEHTLRFKD   K G   M+LLNWLF DE+ FQ++ +NL+++I+R +DR++ALGWC+L+R LVE E
Subjt:  VPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFE

AT3G57570.2 ARM repeat superfamily protein

1.0e-37

46.75

Show/hide

Query:  SAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYVRDAVQNHASLDEIL
        S P+S+VSVTV R M+TLL+ARPKKL +++S L+PD + G S                               S+D++LWFL K V DA +   ++ EIL
Subjt:  SAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSLDQSLWFLHKYVRDAVQNHASLDEIL

Query:  VPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFE
        VP+IEHTLRFKD   K G   M+LLNWLF DE+ FQ++ +NL+++I+R +DR++ALGWC+L+R LVE E
Subjt:  VPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFE

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

CCTTCAATTGTCCGGCCTTCATTTTCCATTTCCGCAGTCTGTTCTGCTCTGCTTGGTATTCCAATGGAAGACGACGAAGGGGAACTTCTCCTATGGAAGTCGGATTCAGC
ACCTCAATCCATGGTCTCAGTCACCGTCGGCAGAGTTATGGCCACCTTACTCGCGGCTCGCCCAAAGAAGCTTCACGACGCCGTTTCCGGTCTCTCACCCGACCACCGCC
ACGGAGCTTCACTAGGTTCTTCTCTCATTTCACTCGCGAATTGTATTCCTCTTCATTTGTTTCATTTTCAGTATACTTTAATGTATTGCACCGGTTCTACAGATTCTTTG
GATCAATCTCTCTGGTTTCTGCATAAGTATGTCAGGGACGCTGTTCAAAACCATGCTTCTTTAGATGAAATCCTCGTTCCAATGATTGAACATACGTTGAGATTCAAGGA
TAAGAACTGGAAGCGAGGGGGCCAAGTTATGGTGCTTCTTAACTGGCTGTTCCTTGACGAGCTTACTTTTCAATCGCTTATCAAAAATCTTGCTGATGTTATTGTGAGAA
AGGATGATCGCTATGTCGCCCTTGGCTGGTGTATCCTTGTTCGCAGTCTTGTGGAGTTCGAGTCTGTCCCTACTGAACTTTCATTGAACGGTGCGGATTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

PSIVRPSFSISAVCSALLGIPMEDDEGELLLWKSDSAPQSMVSVTVGRVMATLLAARPKKLHDAVSGLSPDHRHGASLGSSLISLANCIPLHLFHFQYTLMYCTGSTDSL
DQSLWFLHKYVRDAVQNHASLDEILVPMIEHTLRFKDKNWKRGGQVMVLLNWLFLDELTFQSLIKNLADVIVRKDDRYVALGWCILVRSLVEFESVPTELSLNGAD

Carg14671 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome