; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14681 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14681
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNAC domain protein
Genome locationCarg_Chr01:9697674..9697967
RNA-Seq ExpressionCarg14681
SyntenyCarg14681
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036871.1 uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa]2.7e-2470.41Show/hide
Query:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA
        MPTIFQSQ  P   PS AG  RE GR+R++RS CRSLSFGG+ RGGRN+ A  GD+ RR QG RE+LRRAL PP+RRPTLRW+NFR TPSRLS MSMA
Subjt:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA

KAG6607862.1 hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sororia]5.1e-44100Show/hide
Query:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTAAGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA
        MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTAAGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA
Subjt:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTAAGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA

KAG7024857.1 hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-2473Show/hide
Query:  MPTIFQSQQQPASRPSHAGAVREGGR--SRSLRSNCRSLSFGGVGRGGRNV-TAAGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA
        MPTIFQSQ QP  RPS A A    GR  SRS+RS CRS SF G+ R GRNV TA GDK RR QGRRE+LRRAL PP R+PTLRWLNFR TPSRLSNMSMA
Subjt:  MPTIFQSQQQPASRPSHAGAVREGGR--SRSLRSNCRSLSFGGVGRGGRNV-TAAGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA

KGN60027.2 hypothetical protein Csa_001878 [Cucumis sativus]1.7e-2369.39Show/hide
Query:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA
        MPTIFQSQ  P   PS AG  RE GR+R++RS CRS SFGG+ RGGRN+ A  GD+ RR QG RE+LRRAL PP+RRPTLRW+NFR TPSRLS MSMA
Subjt:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA

XP_011652880.1 uncharacterized protein LOC105435142 [Cucumis sativus]1.7e-2369.39Show/hide
Query:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA
        MPTIFQSQ  P   PS AG  RE GR+R++RS CRS SFGG+ RGGRN+ A  GD+ RR QG RE+LRRAL PP+RRPTLRW+NFR TPSRLS MSMA
Subjt:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA

TrEMBL top hitse value%identityAlignment
A0A068UC67 Uncharacterized protein3.8e-0876.74Show/hide
Query:  DKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSM
        DK RR Q ++E+LRRALTPP RRPTLRWL+FR TPSRL NMSM
Subjt:  DKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSM

A0A0A0LD23 Uncharacterized protein8.3e-2469.39Show/hide
Query:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA
        MPTIFQSQ  P   PS AG  RE GR+R++RS CRS SFGG+ RGGRN+ A  GD+ RR QG RE+LRRAL PP+RRPTLRW+NFR TPSRLS MSMA
Subjt:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA

A0A2C9W6J8 Uncharacterized protein4.9e-0851.85Show/hide
Query:  AGAVREGGRSRSLRSNCRSLSFGGVGRGGRN-VTAAGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA
        A  VR   R  + R  C   +  G  R  R+     GDKL+R Q  +E++RRALTPPNR+ TLRW NFR TPSRLSNMS A
Subjt:  AGAVREGGRSRSLRSNCRSLSFGGVGRGGRN-VTAAGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA

A0A5A7T5L7 Uncharacterized protein1.3e-2470.41Show/hide
Query:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA
        MPTIFQSQ  P   PS AG  RE GR+R++RS CRSLSFGG+ RGGRN+ A  GD+ RR QG RE+LRRAL PP+RRPTLRW+NFR TPSRLS MSMA
Subjt:  MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTA-AGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA

A0A6N2L815 Uncharacterized protein2.9e-0877.27Show/hide
Query:  DKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA
        D+LRR Q  RE+LRRAL PPNRR TLRW NF+ TPSRLSNMSMA
Subjt:  DKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15518.1 unknown protein2.0e-0646.15Show/hide
Query:  REGGRSRSLRSNCRSLSFGGVGRGGRN--VTAAGDKLRR--LQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMS
        R  G    +R  C      G  +  R+  V  + ++L R    G RE+LRRALTPP RR  LRWLNFR TPSRL  MS
Subjt:  REGGRSRSLRSNCRSLSFGGVGRGGRN--VTAAGDKLRR--LQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACAATTTTCCAGTCCCAACAGCAGCCTGCTTCCAGGCCGTCGCACGCCGGCGCCGTAAGGGAAGGTGGCCGAAGCCGGAGCCTTAGATCGAATTGCAGGAGCTT
GAGTTTTGGGGGAGTGGGTAGAGGTGGCCGTAATGTGACGGCAGCCGGAGATAAGCTCCGGCGGCTTCAGGGCAGAAGAGAGATGTTGAGAAGGGCGTTGACGCCGCCCA
ACCGGAGACCCACTCTCCGGTGGTTGAATTTCCGAGCAACTCCCAGTCGGCTCTCGAATATGTCTATGGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTACAATTTTCCAGTCCCAACAGCAGCCTGCTTCCAGGCCGTCGCACGCCGGCGCCGTAAGGGAAGGTGGCCGAAGCCGGAGCCTTAGATCGAATTGCAGGAGCTT
GAGTTTTGGGGGAGTGGGTAGAGGTGGCCGTAATGTGACGGCAGCCGGAGATAAGCTCCGGCGGCTTCAGGGCAGAAGAGAGATGTTGAGAAGGGCGTTGACGCCGCCCA
ACCGGAGACCCACTCTCCGGTGGTTGAATTTCCGAGCAACTCCCAGTCGGCTCTCGAATATGTCTATGGCTTGA
Protein sequenceShow/hide protein sequence
MPTIFQSQQQPASRPSHAGAVREGGRSRSLRSNCRSLSFGGVGRGGRNVTAAGDKLRRLQGRREMLRRALTPPNRRPTLRWLNFRATPSRLSNMSMA