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Carg14722 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14722
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionActin cytoskeleton-regulatory complex protein pan1, putative isoform 1
Genome locationCarg_Chr01:9941012..9941990
RNA-Seq ExpressionCarg14722
SyntenyCarg14722
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR040356 - SPEAR family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607903.1 hypothetical protein SDJN03_01245, partial [Cucurbita argyrosperma subsp. sororia]1.1e-4696.33Show/hide
Query:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
        MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKN    GAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
Subjt:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS

Query:  NRSSSSSSF
        NRSSSSSSF
Subjt:  NRSSSSSSF

KAG7037432.1 hypothetical protein SDJN02_01058, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-82100Show/hide
Query:  MNWVVKLAWPRAFLGTKIQFFRESKSRRRNPSCFVKWITELGWKMIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERI
        MNWVVKLAWPRAFLGTKIQFFRESKSRRRNPSCFVKWITELGWKMIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERI
Subjt:  MNWVVKLAWPRAFLGTKIQFFRESKSRRRNPSCFVKWITELGWKMIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERI

Query:  RLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQSNRSSSSSSFSRFLQ
        RLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQSNRSSSSSSFSRFLQ
Subjt:  RLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQSNRSSSSSSFSRFLQ

XP_022941283.1 uncharacterized protein LOC111446628 isoform X1 [Cucurbita moschata]2.1e-50100Show/hide
Query:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
        MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
Subjt:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS

Query:  NRSSSSSSF
        NRSSSSSSF
Subjt:  NRSSSSSSF

XP_022941284.1 uncharacterized protein LOC111446628 isoform X2 [Cucurbita moschata]2.1e-50100Show/hide
Query:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
        MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
Subjt:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS

Query:  NRSSSSSSF
        NRSSSSSSF
Subjt:  NRSSSSSSF

XP_022981261.1 uncharacterized protein LOC111480450 isoform X2 [Cucurbita maxima]1.4e-4696.36Show/hide
Query:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
        MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKN  GAGAGAAIFSSPSPLSPTKSSSYMSLPIP FRQS
Subjt:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS

Query:  NRSSSSSSFS
        NRSSSSSS S
Subjt:  NRSSSSSSFS

TrEMBL top hitse value%identityAlignment
A0A5A7VEH8 Actin cytoskeleton-regulatory complex protein pan1, putative isoform 11.0e-3985.32Show/hide
Query:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
        MIGM EEEQK+RC+N+RFGSFGTIGGISGRSSSKKLKPKP+KVPQRGLGVAQLE+IRLEEQQKN     A AAIFSS SPLSPTKSSSY+SLPIP F QS
Subjt:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS

Query:  NRSSSSSSF
        NRSSSSSSF
Subjt:  NRSSSSSSF

A0A6J1FMW9 uncharacterized protein LOC111446628 isoform X21.0e-50100Show/hide
Query:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
        MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
Subjt:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS

Query:  NRSSSSSSF
        NRSSSSSSF
Subjt:  NRSSSSSSF

A0A6J1FRP1 uncharacterized protein LOC111446628 isoform X11.0e-50100Show/hide
Query:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
        MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
Subjt:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS

Query:  NRSSSSSSF
        NRSSSSSSF
Subjt:  NRSSSSSSF

A0A6J1IW23 uncharacterized protein LOC111480450 isoform X26.7e-4796.36Show/hide
Query:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
        MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKN  GAGAGAAIFSSPSPLSPTKSSSYMSLPIP FRQS
Subjt:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS

Query:  NRSSSSSSFS
        NRSSSSSS S
Subjt:  NRSSSSSSFS

A0A6J1IZ00 uncharacterized protein LOC111480450 isoform X16.7e-4796.36Show/hide
Query:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS
        MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKN  GAGAGAAIFSSPSPLSPTKSSSYMSLPIP FRQS
Subjt:  MIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGAGAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQS

Query:  NRSSSSSSFS
        NRSSSSSS S
Subjt:  NRSSSSSSFS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTGGGTTGTAAAGTTGGCTTGGCCTCGAGCTTTTCTTGGAACTAAAATCCAATTTTTCAGAGAGAGCAAATCTCGGAGACGGAATCCTTCATGCTTTGTGAAGTG
GATTACAGAGCTAGGATGGAAGATGATAGGAATGGGCGAAGAAGAGCAAAAACGGAGGTGTTTTAATCATAGATTTGGGAGTTTTGGGACAATTGGTGGTATTAGTGGTA
GATCTTCTTCTAAGAAACTAAAGCCGAAGCCTAGGAAAGTTCCTCAAAGAGGGCTTGGTGTTGCACAGCTTGAGAGGATTAGGTTAGAAGAACAGCAGAAGAATGGTGCT
GGTGCTGGTGCTGGTGCTGCTATTTTTTCATCTCCTTCTCCATTGTCACCAACTAAATCCTCCTCTTATATGTCGTTACCGATCCCCGGTTTTCGCCAATCCAATCGTTC
TTCGTCTTCGTCTTCGTTCTCTCGCTTCCTCCAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAATTGGGTTGTAAAGTTGGCTTGGCCTCGAGCTTTTCTTGGAACTAAAATCCAATTTTTCAGAGAGAGCAAATCTCGGAGACGGAATCCTTCATGCTTTGTGAAGTG
GATTACAGAGCTAGGATGGAAGATGATAGGAATGGGCGAAGAAGAGCAAAAACGGAGGTGTTTTAATCATAGATTTGGGAGTTTTGGGACAATTGGTGGTATTAGTGGTA
GATCTTCTTCTAAGAAACTAAAGCCGAAGCCTAGGAAAGTTCCTCAAAGAGGGCTTGGTGTTGCACAGCTTGAGAGGATTAGGTTAGAAGAACAGCAGAAGAATGGTGCT
GGTGCTGGTGCTGGTGCTGCTATTTTTTCATCTCCTTCTCCATTGTCACCAACTAAATCCTCCTCTTATATGTCGTTACCGATCCCCGGTTTTCGCCAATCCAATCGTTC
TTCGTCTTCGTCTTCGTTCTCTCGCTTCCTCCAGTGA
Protein sequenceShow/hide protein sequence
MNWVVKLAWPRAFLGTKIQFFRESKSRRRNPSCFVKWITELGWKMIGMGEEEQKRRCFNHRFGSFGTIGGISGRSSSKKLKPKPRKVPQRGLGVAQLERIRLEEQQKNGA
GAGAGAAIFSSPSPLSPTKSSSYMSLPIPGFRQSNRSSSSSSFSRFLQ