; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg14825 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14825
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein LITTLE ZIPPER 1-like
Genome locationCarg_Chr14:14017339..14017749
RNA-Seq ExpressionCarg14825
SyntenyCarg14825
Gene Ontology termsNA
InterPro domainsIPR039312 - Protein LITTLE ZIPPER


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN56585.1 hypothetical protein Csa_011002 [Cucumis sativus]9.4e-3180.95Show/hide
Query:  MCDSSRLNLTRSFLDSR-HRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPS
        MC SS   LT S+L  R  RRRP+RVY LLRRMRF KEEAN+AGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K P  S
Subjt:  MCDSSRLNLTRSFLDSR-HRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPS

Query:  SNLSA
        S+LSA
Subjt:  SNLSA

XP_022924351.1 protein LITTLE ZIPPER 1-like [Cucurbita moschata]1.0e-48100Show/hide
Query:  MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN
        MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN
Subjt:  MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN

Query:  LSAWLEN
        LSAWLEN
Subjt:  LSAWLEN

XP_022980450.1 protein LITTLE ZIPPER 1-like [Cucurbita maxima]2.9e-4899.07Show/hide
Query:  MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN
        MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQP SN
Subjt:  MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN

Query:  LSAWLEN
        LSAWLEN
Subjt:  LSAWLEN

XP_023527864.1 protein LITTLE ZIPPER 2-like isoform X1 [Cucurbita pepo subsp. pepo]1.9e-3196.25Show/hide
Query:  LLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSNLSAWLEN
        + RRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKP PSSNLSAWLEN
Subjt:  LLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSNLSAWLEN

XP_023527865.1 protein LITTLE ZIPPER 1-like isoform X2 [Cucurbita pepo subsp. pepo]6.5e-4899.07Show/hide
Query:  MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN
        MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKP PSSN
Subjt:  MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN

Query:  LSAWLEN
        LSAWLEN
Subjt:  LSAWLEN

TrEMBL top hitse value%identityAlignment
A0A0A0L3S0 Uncharacterized protein4.6e-3180.95Show/hide
Query:  MCDSSRLNLTRSFLDSR-HRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPS
        MC SS   LT S+L  R  RRRP+RVY LLRRMRF KEEAN+AGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFS  K P  S
Subjt:  MCDSSRLNLTRSFLDSR-HRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQK-PQPS

Query:  SNLSA
        S+LSA
Subjt:  SNLSA

A0A6J1CZF0 protein LITTLE ZIPPER 2-like1.6e-2875.49Show/hide
Query:  MCDSSRL---NLTRSFLD--SRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKP
        MCDSSRL   + TRS L    RHRR P+RV+RL+RRMR  KEEA   GV+VEMEIKNLKL+MENQSIIEENERLRK+AFLLHKENQVLLSQ+Q+FS QKP
Subjt:  MCDSSRL---NLTRSFLD--SRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKP

Query:  QP
        QP
Subjt:  QP

A0A6J1E9A8 protein LITTLE ZIPPER 1-like4.8e-49100Show/hide
Query:  MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN
        MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN
Subjt:  MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN

Query:  LSAWLEN
        LSAWLEN
Subjt:  LSAWLEN

A0A6J1IF90 protein LITTLE ZIPPER 3-like3.3e-2976.19Show/hide
Query:  MCDSSR---LNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQP
        MCDSSR   L+ TRS L  RHRRRPIR+YRL RRM+F K+     GVK EMEI+NLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ FSK+K QP
Subjt:  MCDSSR---LNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQP

Query:  SSNLS
        +S+LS
Subjt:  SSNLS

A0A6J1IWC5 protein LITTLE ZIPPER 1-like1.4e-4899.07Show/hide
Query:  MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN
        MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQP SN
Subjt:  MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSN

Query:  LSAWLEN
        LSAWLEN
Subjt:  LSAWLEN

SwissProt top hitse value%identityAlignment
F4IG60 Protein LITTLE ZIPPER 11.4e-0854.55Show/hide
Query:  IRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        +R+ RL RR R  +EE        +ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S LQ
Subjt:  IRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

Q56WL5 Protein LITTLE ZIPPER 47.1e-0557.41Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSKQKPQPSSN
        ME  N KLY++N  II+ENERLRKKA +L++ENQ LL +L Q  SK K    SN
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSKQKPQPSSN

Q9LXI8 Protein LITTLE ZIPPER 32.7e-0462.5Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSKQK
        ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL Q  SK K
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSKQK

Q9LZX5 Protein LITTLE ZIPPER 21.2e-0752.31Show/hide
Query:  IRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL
        +R+  L RR R  KE+        EME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Subjt:  IRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL

Arabidopsis top hitse value%identityAlignment
AT2G45450.1 protein binding9.8e-1054.55Show/hide
Query:  IRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ
        +R+ RL RR R  +EE        +ME+ NLKLY+ENQ+II ENE+L+KKA LLH+EN+ L S LQ
Subjt:  IRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQ

AT3G52770.1 protein binding1.9e-0562.5Show/hide
Query:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSKQK
        ME  N KL++EN  I++ENERLRKKA LL++ENQ LL QL Q  SK K
Subjt:  MEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL-QNFSKQK

AT3G60890.1 protein binding8.3e-0952.31Show/hide
Query:  IRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL
        +R+  L RR R  KE+        EME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Subjt:  IRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL

AT3G60890.2 protein binding1.2e-0755.17Show/hide
Query:  RRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL
        RR R  KE+        EME++NLKL++ENQSII ENE L+KKA LLH EN  L + L
Subjt:  RRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCGATTCTTCTCGATTGAACCTCACTCGTTCGTTTTTAGATTCTCGCCATCGCCGCCGGCCGATTCGAGTTTACAGGCTTTTGAGGAGGATGAGATTCAAGAAGGA
AGAGGCGAATACGGCGGGCGTTAAGGTAGAGATGGAGATCAAGAATTTGAAACTGTACATGGAGAATCAGAGCATTATTGAGGAGAACGAGAGGCTGAGGAAGAAAGCGT
TTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAAGCAAAAACCACAGCCTAGCTCCAATTTGAGCGCCTGGCTCGAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCGATTCTTCTCGATTGAACCTCACTCGTTCGTTTTTAGATTCTCGCCATCGCCGCCGGCCGATTCGAGTTTACAGGCTTTTGAGGAGGATGAGATTCAAGAAGGA
AGAGGCGAATACGGCGGGCGTTAAGGTAGAGATGGAGATCAAGAATTTGAAACTGTACATGGAGAATCAGAGCATTATTGAGGAGAACGAGAGGCTGAGGAAGAAAGCGT
TTCTTCTTCACAAAGAGAATCAGGTTTTGTTATCTCAACTCCAGAATTTCTCCAAGCAAAAACCACAGCCTAGCTCCAATTTGAGCGCCTGGCTCGAAAATTGA
Protein sequenceShow/hide protein sequence
MCDSSRLNLTRSFLDSRHRRRPIRVYRLLRRMRFKKEEANTAGVKVEMEIKNLKLYMENQSIIEENERLRKKAFLLHKENQVLLSQLQNFSKQKPQPSSNLSAWLEN