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Carg14832 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14832
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:13985802..13986389
RNA-Seq ExpressionCarg14832
SyntenyCarg14832
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN81606.1 hypothetical protein VITISV_008993 [Vitis vinifera]1.6e-0538.89Show/hide
Query:  ELQLILFYLLLKGKDMSNTTKNWLSNTSLCLVAYSYSCVEALVFRNMQKQLRHITSSEHFVHCGKMSRALFRVKVRCKYTLRCTLPPQKL
        E+ L L  L+L+ +D ++   NW+S   + L++     V ALV+    ++LRH+  ++HFVH GK+   L R +V  K+TLR TL P+KL
Subjt:  ELQLILFYLLLKGKDMSNTTKNWLSNTSLCLVAYSYSCVEALVFRNMQKQLRHITSSEHFVHCGKMSRALFRVKVRCKYTLRCTLPPQKL

KAG7018948.1 hypothetical protein SDJN02_20825, partial [Cucurbita argyrosperma subsp. argyrosperma]2.5e-83100Show/hide
Query:  MYGTRISLNFRKPNRYRIELQLILFYLLLKGKDMSNTTKNWLSNTSLCLVAYSYSCVEALVFRNMQKQLRHITSSEHFVHCGKMSRALFRVKVRCKYTLR
        MYGTRISLNFRKPNRYRIELQLILFYLLLKGKDMSNTTKNWLSNTSLCLVAYSYSCVEALVFRNMQKQLRHITSSEHFVHCGKMSRALFRVKVRCKYTLR
Subjt:  MYGTRISLNFRKPNRYRIELQLILFYLLLKGKDMSNTTKNWLSNTSLCLVAYSYSCVEALVFRNMQKQLRHITSSEHFVHCGKMSRALFRVKVRCKYTLR

Query:  CTLPPQKLARPTRSTAAIAATTTIALLATSTAVPRAHLGLAFLPFFHQKLSKAYWKNKTIV
        CTLPPQKLARPTRSTAAIAATTTIALLATSTAVPRAHLGLAFLPFFHQKLSKAYWKNKTIV
Subjt:  CTLPPQKLARPTRSTAAIAATTTIALLATSTAVPRAHLGLAFLPFFHQKLSKAYWKNKTIV

RWW39789.1 hypothetical protein BHE74_00054844 [Ensete ventricosum]8.1e-1045.95Show/hide
Query:  LILF---YLLLKGKDMSNTTKNWLSNTSLCLVAYSYSCVEALVFRNMQKQLRHITSSEHFVHCGKMSRALFRVKVRCKYTLRCTLPPQKLARP------T
        L+LF   +LLL+G+D+SN T + ++   L LVA S   V  LV R++Q++LR +  +EH VH  +  RAL  V+VR +Y  R  LPPQKLARP       
Subjt:  LILF---YLLLKGKDMSNTTKNWLSNTSLCLVAYSYSCVEALVFRNMQKQLRHITSSEHFVHCGKMSRALFRVKVRCKYTLRCTLPPQKLARP------T

Query:  RSTAAIAATTT
         S+AA A+TTT
Subjt:  RSTAAIAATTT

TrEMBL top hitse value%identityAlignment
A5BYK5 Uncharacterized protein7.6e-0638.89Show/hide
Query:  ELQLILFYLLLKGKDMSNTTKNWLSNTSLCLVAYSYSCVEALVFRNMQKQLRHITSSEHFVHCGKMSRALFRVKVRCKYTLRCTLPPQKL
        E+ L L  L+L+ +D ++   NW+S   + L++     V ALV+    ++LRH+  ++HFVH GK+   L R +V  K+TLR TL P+KL
Subjt:  ELQLILFYLLLKGKDMSNTTKNWLSNTSLCLVAYSYSCVEALVFRNMQKQLRHITSSEHFVHCGKMSRALFRVKVRCKYTLRCTLPPQKL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTATGGCACTCGAATTAGTTTAAATTTTCGAAAGCCAAATCGTTATCGAATAGAGCTTCAGCTAATTTTGTTTTACCTGTTGTTGAAGGGCAAAGATATGAGCAACAC
AACCAAAAACTGGCTCTCTAACACGAGCTTGTGCCTCGTAGCATATAGTTATAGCTGCGTCGAGGCGCTTGTGTTCAGGAATATGCAGAAGCAGCTTCGACACATTACTA
GCTCCGAACACTTTGTGCACTGCGGCAAAATGAGTCGTGCCTTGTTCAGAGTCAAAGTAAGGTGCAAATATACACTCCGGTGTACACTTCCTCCGCAGAAACTTGCACGC
CCCACACGGTCCACCGCTGCCATTGCTGCTACTACCACCATTGCCCTCCTTGCAACCTCCACCGCCGTGCCTCGAGCTCATCTCGGCCTTGCTTTCTTGCCTTTCTTTCA
TCAAAAGCTAAGCAAGGCTTACTGGAAGAACAAGACAATTGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTATGGCACTCGAATTAGTTTAAATTTTCGAAAGCCAAATCGTTATCGAATAGAGCTTCAGCTAATTTTGTTTTACCTGTTGTTGAAGGGCAAAGATATGAGCAACAC
AACCAAAAACTGGCTCTCTAACACGAGCTTGTGCCTCGTAGCATATAGTTATAGCTGCGTCGAGGCGCTTGTGTTCAGGAATATGCAGAAGCAGCTTCGACACATTACTA
GCTCCGAACACTTTGTGCACTGCGGCAAAATGAGTCGTGCCTTGTTCAGAGTCAAAGTAAGGTGCAAATATACACTCCGGTGTACACTTCCTCCGCAGAAACTTGCACGC
CCCACACGGTCCACCGCTGCCATTGCTGCTACTACCACCATTGCCCTCCTTGCAACCTCCACCGCCGTGCCTCGAGCTCATCTCGGCCTTGCTTTCTTGCCTTTCTTTCA
TCAAAAGCTAAGCAAGGCTTACTGGAAGAACAAGACAATTGTTTGA
Protein sequenceShow/hide protein sequence
MYGTRISLNFRKPNRYRIELQLILFYLLLKGKDMSNTTKNWLSNTSLCLVAYSYSCVEALVFRNMQKQLRHITSSEHFVHCGKMSRALFRVKVRCKYTLRCTLPPQKLAR
PTRSTAAIAATTTIALLATSTAVPRAHLGLAFLPFFHQKLSKAYWKNKTIV