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Carg14839 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14839
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMaturase
Genome locationCarg_Chr14:13943263..13945991
RNA-Seq ExpressionCarg14839
SyntenyCarg14839
Gene Ontology termsGO:0006396 - RNA processing (biological process)
GO:0005622 - intracellular (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABF93189.1 maturase, partial [Chimonanthus grammatus]5.1e-1452.87Show/hide
Query:  NLVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK
        ++V PIEKIMKEA++M+  SIYD  F     F   R   G  +  RR+    G S WF EF+ RKCFHTID+HRL+SI KE+ID+PK
Subjt:  NLVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK

KAG6621676.1 hypothetical protein I3842_Q009200 [Carya illinoinensis]3.0e-1452.33Show/hide
Query:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK
        +V PIEKIMKEA++M++ SIYD  F     F   R   G ++  RR+    G S WF EF+ RKCFHTID+HRL+ I KE+ID+PK
Subjt:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK

KAG7018942.1 hypothetical protein SDJN02_20819, partial [Cucurbita argyrosperma subsp. argyrosperma]7.7e-79100Show/hide
Query:  MTKTPKEKEVKSRLRRGGLCSTGEVLDDESLTSANLVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRVGASCWFFEFNTRKCFHTI
        MTKTPKEKEVKSRLRRGGLCSTGEVLDDESLTSANLVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRVGASCWFFEFNTRKCFHTI
Subjt:  MTKTPKEKEVKSRLRRGGLCSTGEVLDDESLTSANLVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRVGASCWFFEFNTRKCFHTI

Query:  DQHRLVSILKEKIDNPKSAADFRDLSDHDEGSVGVAAGTGSVSASRIFRRVV
        DQHRLVSILKEKIDNPKSAADFRDLSDHDEGSVGVAAGTGSVSASRIFRRVV
Subjt:  DQHRLVSILKEKIDNPKSAADFRDLSDHDEGSVGVAAGTGSVSASRIFRRVV

YP_003587246.1 maturase, partial [Citrullus lanatus]3.5e-1554.65Show/hide
Query:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK
        +VRPIEKIMKEA++M++ SIYD  F     F   R   G  +  RR+    G S WF EF+ RKCFHTID+HRL+SI KE+ID+PK
Subjt:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK

YP_009913627.1 maturase [Luffa acutangula]3.5e-1554.65Show/hide
Query:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK
        +VRPIEKIMKEA++M++ SIYD  F     F   R   G  +  RR+    G S WF EF+ RKCFHTID+HRL+SI KE+ID+PK
Subjt:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK

TrEMBL top hitse value%identityAlignment
A0A7D6C8J7 Maturase1.7e-1554.65Show/hide
Query:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK
        +VRPIEKIMKEA++M++ SIYD  F     F   R   G  +  RR+    G S WF EF+ RKCFHTID+HRL+SI KE+ID+PK
Subjt:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK

A9X5J0 Maturase (Fragment)2.5e-1452.87Show/hide
Query:  NLVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK
        ++V PIEKIMKEA++M+  SIYD  F     F   R   G  +  RR+    G S WF EF+ RKCFHTID+HRL+SI KE+ID+PK
Subjt:  NLVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK

D5I3B6 Maturase (Fragment)1.7e-1554.65Show/hide
Query:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK
        +VRPIEKIMKEA++M++ SIYD  F     F   R   G  +  RR+    G S WF EF+ RKCFHTID+HRL+SI KE+ID+PK
Subjt:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK

Q9T6Y1 Maturase (Fragment)2.5e-1453.49Show/hide
Query:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK
        +V PIEKIMKEA++M+  SIYD  F     F   R   G  +  RR+    G S WFFEF+ RKCFHTID+HRL+S  KE+ID+PK
Subjt:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK

Q9T6Y2 Maturase (Fragment)2.5e-1453.49Show/hide
Query:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK
        +V PIEKIMKEA++M+  SIYD  F     F   R   G  +  RR+    G S WFFEF+ RKCFHTID+HRL+S  KE+ID+PK
Subjt:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
ATMG00520.1 Intron maturase, type II family protein1.1e-1753.49Show/hide
Query:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK
        +V PIEKIMKEA++M++ SIYD  F     F   R   G  +  RR+    G S WF EF+ RKCFHTID+HRL+ ILKE+ID+PK
Subjt:  LVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRV----GASCWFFEFNTRKCFHTIDQHRLVSILKEKIDNPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAAGACTCCAAAAGAAAAAGAAGTCAAGTCTCGATTAAGGAGAGGCGGACTTTGTTCAACGGGGGAGGTGTTGGATGATGAAAGTCTCACATCGGCTAATTTAGT
TCGACCTATAGAAAAGATCATGAAAGAGGCGGTCAAAATGATAATCAATTCCATTTATGATATGAGTTTTCGGACACGTCGCACTTTCACTAAGGCAAGGCCACCACTCG
GCCCTAAGACGGATCAAAGAAGAGTGGGAGCCTCTTGCTGGTTTTTTGAATTCAACACGAGGAAGTGTTTTCACACTATTGACCAACATCGACTCGTCTCAATCTTGAAG
GAAAAGATCGACAATCCCAAGAGCGCAGCTGATTTTCGGGACCTCTCGGATCACGACGAGGGCTCGGTCGGAGTCGCCGCCGGAACCGGCAGCGTTTCGGCTTCGAGAAT
TTTCCGGCGAGTTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAAGACTCCAAAAGAAAAAGAAGTCAAGTCTCGATTAAGGAGAGGCGGACTTTGTTCAACGGGGGAGGTGTTGGATGATGAAAGTCTCACATCGGCTAATTTAGT
TCGACCTATAGAAAAGATCATGAAAGAGGCGGTCAAAATGATAATCAATTCCATTTATGATATGAGTTTTCGGACACGTCGCACTTTCACTAAGGCAAGGCCACCACTCG
GCCCTAAGACGGATCAAAGAAGAGTGGGAGCCTCTTGCTGGTTTTTTGAATTCAACACGAGGAAGTGTTTTCACACTATTGACCAACATCGACTCGTCTCAATCTTGAAG
GAAAAGATCGACAATCCCAAGAGCGCAGCTGATTTTCGGGACCTCTCGGATCACGACGAGGGCTCGGTCGGAGTCGCCGCCGGAACCGGCAGCGTTTCGGCTTCGAGAAT
TTTCCGGCGAGTTGTTTAG
Protein sequenceShow/hide protein sequence
MTKTPKEKEVKSRLRRGGLCSTGEVLDDESLTSANLVRPIEKIMKEAVKMIINSIYDMSFRTRRTFTKARPPLGPKTDQRRVGASCWFFEFNTRKCFHTIDQHRLVSILK
EKIDNPKSAADFRDLSDHDEGSVGVAAGTGSVSASRIFRRVV