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Carg14858 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14858
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionEF-hand domain-containing protein
Genome locationCarg_Chr14:13856977..13860079
RNA-Seq ExpressionCarg14858
SyntenyCarg14858
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
GO:0048306 - calcium-dependent protein binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582540.1 hypothetical protein SDJN03_22542, partial [Cucurbita argyrosperma subsp. sororia]2.1e-8784.02Show/hide
Query:  MINFDIVAATAEIFIFLCLERRFQLQSGAALR------------------GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAP
        MINFDIVAATAEIFIFLCLERRFQLQSGAALR                  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLL  +         
Subjt:  MINFDIVAATAEIFIFLCLERRFQLQSGAALR------------------GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAP

Query:  EVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYA
             DINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYA
Subjt:  EVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYA

Query:  FLVTLAAFVFQNSQKPMLK
        FLVTLAAFVFQNSQKPMLK
Subjt:  FLVTLAAFVFQNSQKPMLK

KAG7018923.1 hypothetical protein SDJN02_20800, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-104100Show/hide
Query:  MINFDIVAATAEIFIFLCLERRFQLQSGAALRGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDP
        MINFDIVAATAEIFIFLCLERRFQLQSGAALRGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDP
Subjt:  MINFDIVAATAEIFIFLCLERRFQLQSGAALRGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDP

Query:  PTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPML
        PTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPML
Subjt:  PTEERFRELIKENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPML

Query:  K
        K
Subjt:  K

XP_022924303.1 uncharacterized protein LOC111431834 [Cucurbita moschata]8.4e-7389.35Show/hide
Query:  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS
        GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLL  +              DINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS
Subjt:  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS

Query:  LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPV+GSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
Subjt:  LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

XP_022980436.1 uncharacterized protein LOC111479803 [Cucurbita maxima]7.1e-7288.17Show/hide
Query:  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS
        GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLL  +              DINKRLPISHLDPPTEERFR+L+KENDWN+DKKIGRDEFLGFILS
Subjt:  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS

Query:  LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
Subjt:  LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

XP_023528258.1 uncharacterized protein LOC111791228 [Cucurbita pepo subsp. pepo]6.4e-7389.94Show/hide
Query:  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS
        GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLL  +              DINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS
Subjt:  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS

Query:  LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
Subjt:  LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

TrEMBL top hitse value%identityAlignment
A0A0A0L6I0 EF-hand domain-containing protein2.4e-4155.68Show/hide
Query:  QSGAALRGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDE
        Q+   L GKEWR+ QL NIS++IFD  G  K++LSFEDLYIATLL  +              DINK LP  H+DPP ++R +E+++  D NQ+  I R+E
Subjt:  QSGAALRGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDE

Query:  FLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        FL F+  LTS++FIS+S RLI+TLV+APT+AVVTK+STEG+P +G +VQK+PSSAYA LVTLAA +FQNS++ +LK
Subjt:  FLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

A0A5A7U485 EF-hand domain-containing protein7.7e-4055.93Show/hide
Query:  GAALR---GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRD
        G ALR   G++W+++QL  IS++IFD     K+KLSFEDLYIATLL  +              DINK LP  H+DPPT+ER  EL++++D N+++ I RD
Subjt:  GAALR---GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRD

Query:  EFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        EFL FI  LT ++  S+S RLI+TLV+APT+AVVTKRSTEGIP +G +VQK+PSSAYA LVTLAA +FQNS + +LK
Subjt:  EFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

A0A6J1D109 uncharacterized protein LOC1110160242.4e-4159.28Show/hide
Query:  GKEWRDEQLRNISDRIFDMIGDKKDK--LSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFI
        GK+WRD Q+R ISD+IF+ I +  DK  LSFEDLYIATLL  +              +INKRLP  H DPP++ER RELIKE+D N D++I R+EF+ FI
Subjt:  GKEWRDEQLRNISDRIFDMIGDKKDK--LSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFI

Query:  LSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQK
        L LTSD  I++S  L+LTLV+APTVAVVTK+STEG+P VG LVQKLP+S YA L+TLAA  FQN+ +
Subjt:  LSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQK

A0A6J1EC16 uncharacterized protein LOC1114318344.1e-7389.35Show/hide
Query:  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS
        GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLL  +              DINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS
Subjt:  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS

Query:  LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPV+GSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
Subjt:  LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

A0A6J1ITL1 uncharacterized protein LOC1114798033.4e-7288.17Show/hide
Query:  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS
        GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLL  +              DINKRLPISHLDPPTEERFR+L+KENDWN+DKKIGRDEFLGFILS
Subjt:  GKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLGFILS

Query:  LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
        LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK
Subjt:  LTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64850.1 Calcium-binding EF hand family protein8.5e-3145.62Show/hide
Query:  LRGKEWRDEQLRNISDRIFD--MIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLG
        LRGKEWR +Q++ I DR+FD   +   +  L+FE+LYIA LL  +              DINKRLP  H DPP+++    ++ + D N D ++ R+EF+ 
Subjt:  LRGKEWRDEQLRNISDRIFD--MIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELIKENDWNQDKKIGRDEFLG

Query:  FILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLA
        FI  +T++ F  +S  LI+ L++APTVA+ TK++TEG+P VG +VQKLP+S YA LVTLA
Subjt:  FILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAATTTCGATATCGTTGCTGCTACGGCGGAGATCTTCATCTTCCTTTGCCTGGAGCGCCGATTTCAATTACAGTCGGGGGCTGCTTTGCGAGGCAAAGAATGGAG
GGACGAGCAATTGAGGAATATATCAGATAGAATATTTGATATGATTGGAGATAAGAAGGATAAGCTGTCGTTTGAAGATCTGTACATTGCTACGTTACTTACACCGAGCG
GTGTGCCAGCGAGGACGCCGGCTCCCGAGGTGGGTGGATTTGATATTAACAAGCGGTTGCCTATCTCTCATCTTGATCCGCCCACAGAGGAACGTTTCAGAGAGCTCATA
AAGGAGAACGACTGGAACCAGGATAAAAAAATTGGGCGTGACGAATTCTTGGGTTTTATACTGAGCTTGACATCTGACGCGTTCATATCACTGAGCCACAGATTGATCCT
CACTTTGGTGATAGCACCAACAGTCGCAGTGGTCACAAAGAGAAGTACTGAAGGCATCCCAGTCGTTGGAAGCCTGGTCCAAAAACTGCCCTCTTCAGCTTATGCTTTCC
TCGTCACCCTTGCTGCTTTCGTGTTTCAAAACTCTCAGAAGCCGATGCTTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATAAATTTCGATATCGTTGCTGCTACGGCGGAGATCTTCATCTTCCTTTGCCTGGAGCGCCGATTTCAATTACAGTCGGGGGCTGCTTTGCGAGGCAAAGAATGGAG
GGACGAGCAATTGAGGAATATATCAGATAGAATATTTGATATGATTGGAGATAAGAAGGATAAGCTGTCGTTTGAAGATCTGTACATTGCTACGTTACTTACACCGAGCG
GTGTGCCAGCGAGGACGCCGGCTCCCGAGGTGGGTGGATTTGATATTAACAAGCGGTTGCCTATCTCTCATCTTGATCCGCCCACAGAGGAACGTTTCAGAGAGCTCATA
AAGGAGAACGACTGGAACCAGGATAAAAAAATTGGGCGTGACGAATTCTTGGGTTTTATACTGAGCTTGACATCTGACGCGTTCATATCACTGAGCCACAGATTGATCCT
CACTTTGGTGATAGCACCAACAGTCGCAGTGGTCACAAAGAGAAGTACTGAAGGCATCCCAGTCGTTGGAAGCCTGGTCCAAAAACTGCCCTCTTCAGCTTATGCTTTCC
TCGTCACCCTTGCTGCTTTCGTGTTTCAAAACTCTCAGAAGCCGATGCTTAAATGATAAGTTCATACTCACTCTCTTTCATTCATTCCATTTGTTGTATATTCCTTTCCT
ATTTACATACATGTGATTGTGAACAAATTACAACACTTTTACATTGAATTCACTATTTCAAGCCTTGTTTGTAATTTGTTTCTTGGCTCTTCACCCTTTTCGTTCCGTTC
ATGAAGATCCCGCCCACGATG
Protein sequenceShow/hide protein sequence
MINFDIVAATAEIFIFLCLERRFQLQSGAALRGKEWRDEQLRNISDRIFDMIGDKKDKLSFEDLYIATLLTPSGVPARTPAPEVGGFDINKRLPISHLDPPTEERFRELI
KENDWNQDKKIGRDEFLGFILSLTSDAFISLSHRLILTLVIAPTVAVVTKRSTEGIPVVGSLVQKLPSSAYAFLVTLAAFVFQNSQKPMLK