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Carg14866 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14866
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionlate embryogenesis abundant protein 6-like
Genome locationCarg_Chr14:13807099..13810321
RNA-Seq ExpressionCarg14866
SyntenyCarg14866
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
InterPro domainsIPR005513 - Late embryogenesis abundant protein, LEA_1 subgroup


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004134355.1 late embryogenesis abundant protein 6 [Cucumis sativus]6.3e-3276.72Show/hide
Query:  QLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTT----NVATAPGVTMVGAPG
        +LHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FV+PG GTTT    +V  APG+TMVGAPG
Subjt:  QLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTT----NVATAPGVTMVGAPG

Query:  TVDMAG-PHTVHKKTL
        TVDMAG P  V+KK L
Subjt:  TVDMAG-PHTVHKKTL

XP_022924652.1 late embryogenesis abundant protein 6-like [Cucurbita moschata]2.1e-4898.21Show/hide
Query:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD
        ++LHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD
Subjt:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD

Query:  MAGPHTVHKKTL
        MAGPHTVHKKTL
Subjt:  MAGPHTVHKKTL

XP_022980446.1 late embryogenesis abundant protein 6-like [Cucurbita maxima]6.3e-4897.32Show/hide
Query:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD
        ++LHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD
Subjt:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD

Query:  MAGPHTVHKKTL
        M GPHTVHKKTL
Subjt:  MAGPHTVHKKTL

XP_023526292.1 late embryogenesis abundant protein 6-like isoform X1 [Cucurbita pepo subsp. pepo]9.0e-4795.54Show/hide
Query:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD
        ++LHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHAN HTNIFVAPGDGTTT VATAPGVTMVGAPGTVD
Subjt:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD

Query:  MAGPHTVHKKTL
        M GPHTVHKKTL
Subjt:  MAGPHTVHKKTL

XP_023526293.1 late embryogenesis abundant protein 6-like isoform X2 [Cucurbita pepo subsp. pepo]9.0e-4795.54Show/hide
Query:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD
        ++LHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHAN HTNIFVAPGDGTTT VATAPGVTMVGAPGTVD
Subjt:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD

Query:  MAGPHTVHKKTL
        M GPHTVHKKTL
Subjt:  MAGPHTVHKKTL

TrEMBL top hitse value%identityAlignment
A0A0A0L6I7 Uncharacterized protein3.0e-3276.72Show/hide
Query:  QLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTT----NVATAPGVTMVGAPG
        +LHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FV+PG GTTT    +V  APG+TMVGAPG
Subjt:  QLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTT----NVATAPGVTMVGAPG

Query:  TVDMAG-PHTVHKKTL
        TVDMAG P  V+KK L
Subjt:  TVDMAG-PHTVHKKTL

A0A1S3AWI7 uncharacterized protein LOC1034833976.8e-3275.42Show/hide
Query:  QLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTT------NVATAPGVTMVGA
        +LHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GT T      NV  APG+TMVGA
Subjt:  QLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTT------NVATAPGVTMVGA

Query:  PGTVDMAG-PHTVHKKTL
        PGTVDMAG P   +KK L
Subjt:  PGTVDMAG-PHTVHKKTL

A0A5A7U624 Late embryogenesis abundant protein6.8e-3275.42Show/hide
Query:  QLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTT------NVATAPGVTMVGA
        +LHD++ MRKAK+EAKAEEKAEKELAKARVEVAHEVRLAREAEAAM LHVAKAG +AEKEMAK+A+ HTN FVAPG GT T      NV  APG+TMVGA
Subjt:  QLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTT------NVATAPGVTMVGA

Query:  PGTVDMAG-PHTVHKKTL
        PGTVDMAG P   +KK L
Subjt:  PGTVDMAG-PHTVHKKTL

A0A6J1ED39 late embryogenesis abundant protein 6-like1.0e-4898.21Show/hide
Query:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD
        ++LHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD
Subjt:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD

Query:  MAGPHTVHKKTL
        MAGPHTVHKKTL
Subjt:  MAGPHTVHKKTL

A0A6J1IRE5 late embryogenesis abundant protein 6-like3.0e-4897.32Show/hide
Query:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD
        ++LHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD
Subjt:  NQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVD

Query:  MAGPHTVHKKTL
        M GPHTVHKKTL
Subjt:  MAGPHTVHKKTL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G32560.1 Late embryogenesis abundant protein, group 1 protein2.0e-0442.47Show/hide
Query:  QLHDITAMRKAK---SEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAH
        ++ D+ +  K K    +AKA+EKAE+ +A  K   E+AH+ R A+EAEA M +H+AKA    +K MAK ++ H
Subjt:  QLHDITAMRKAK---SEAKAEEKAEKELA--KARVEVAHEVRLAREAEAAMSLHVAKAGKRAEKEMAKHANAH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTGATTCGGCTGTTGAGTGAGGCATACACCGACTGTAGAGAAGAGCTAGTGATCGGCAGCAATAACGACGGCGTCGGAGTGCGATTTTGGAGAGGAAGGGTGTC
GGGCGTGCTGTGGAAGCTCCGAATTCGCCGGAGAAATGGTATCCGCTTCGCCTTTTTTCTCCTTGGAACAAGCTGCAGGGTCAATCAGCTACACGACATCACTGCCATGC
GGAAGGCCAAGTCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAGGCAAGAGTGGAGGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCA
ATGAGTCTTCATGTTGCCAAAGCTGGAAAGAGGGCTGAGAAAGAAATGGCTAAGCATGCCAATGCTCACACCAATATCTTTGTGGCTCCTGGCGACGGCACCACCACCAA
CGTGGCCACCGCTCCAGGCGTGACTATGGTCGGAGCCCCTGGCACCGTCGACATGGCTGGACCTCATACCGTTCATAAGAAGACACTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTGATTCGGCTGTTGAGTGAGGCATACACCGACTGTAGAGAAGAGCTAGTGATCGGCAGCAATAACGACGGCGTCGGAGTGCGATTTTGGAGAGGAAGGGTGTC
GGGCGTGCTGTGGAAGCTCCGAATTCGCCGGAGAAATGGTATCCGCTTCGCCTTTTTTCTCCTTGGAACAAGCTGCAGGGTCAATCAGCTACACGACATCACTGCCATGC
GGAAGGCCAAGTCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAGGCAAGAGTGGAGGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCA
ATGAGTCTTCATGTTGCCAAAGCTGGAAAGAGGGCTGAGAAAGAAATGGCTAAGCATGCCAATGCTCACACCAATATCTTTGTGGCTCCTGGCGACGGCACCACCACCAA
CGTGGCCACCGCTCCAGGCGTGACTATGGTCGGAGCCCCTGGCACCGTCGACATGGCTGGACCTCATACCGTTCATAAGAAGACACTGTAACTCTTGTAACGCCATCAAA
AAGCTGGTCATCTTTCATTTGCAAGTAATTACCTTTGTGTTTGATTTGTTTTTCTACAAGTTCTACCACATCTTTAGATGTTGTGTAGTATACATACAAAAGAATGTAAC
ATTGTATTCCGAGACCGTTCATAACAAGAAATCGAAGTATTTAAAGATATTAATCTGTCACTAACTTCTGAGACTTATGAGAGTGATCCGCTGAAATCCCACATTAACTA
TATTTTCATTGTATGAAGACTTTGGTATGAATCTAGAATATGTAATTGAGCTCAATTGTCTCCTTTGTAACAGCTCAAGCCCGTCGC
Protein sequenceShow/hide protein sequence
MNLIRLLSEAYTDCREELVIGSNNDGVGVRFWRGRVSGVLWKLRIRRRNGIRFAFFLLGTSCRVNQLHDITAMRKAKSEAKAEEKAEKELAKARVEVAHEVRLAREAEAA
MSLHVAKAGKRAEKEMAKHANAHTNIFVAPGDGTTTNVATAPGVTMVGAPGTVDMAGPHTVHKKTL