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Carg14873 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14873
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein phosphatase 2C 29-like
Genome locationCarg_Chr14:13781018..13783877
RNA-Seq ExpressionCarg14873
SyntenyCarg14873
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049081.1 hypothetical protein E6C27_scaffold171G003100 [Cucumis melo var. makuwa]7.3e-2682.35Show/hide
Query:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGS
        MDITVPG N PEEVTRESLI+ISYEEPET LSSKR S KLSSEN+NL NGI+HN VEGKEYD  EK+RSELIAISFLES PE GS
Subjt:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGS

KAG6582528.1 hypothetical protein SDJN03_22530, partial [Cucurbita argyrosperma subsp. sororia]2.2e-78100Show/hide
Query:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS
        MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS
Subjt:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS

Query:  SGKLGSENLNLVNEIDHNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKG
        SGKLGSENLNLVNEIDHNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKG
Subjt:  SGKLGSENLNLVNEIDHNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKG

KAG6597232.1 DAR GTPase 2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2266.02Show/hide
Query:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQ
        MDITVPG N  EEVTRESLIAISY EPE+ LSSKR SGKL+S+NL        NLVEGKE+D  EKYRSELI+ISFLESPPEIGS  V +LK  +    +
Subjt:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQ

Query:  SSG
         +G
Subjt:  SSG

KAG7018913.1 hypothetical protein SDJN02_20787, partial [Cucurbita argyrosperma subsp. argyrosperma]8.5e-99100Show/hide
Query:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS
        MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS
Subjt:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQS

Query:  SGKLGSENLNLVNEIDHNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKGQEAVGVIDENKETGLKHAERPIKVFGEQIQLSILRL
        SGKLGSENLNLVNEIDHNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKGQEAVGVIDENKETGLKHAERPIKVFGEQIQLSILRL
Subjt:  SGKLGSENLNLVNEIDHNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKGQEAVGVIDENKETGLKHAERPIKVFGEQIQLSILRL

KGN56651.1 hypothetical protein Csa_009703 [Cucumis sativus]8.1e-2573.91Show/hide
Query:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGSGTVTELK
        MD TVPG N PEEVTRESLI+ISYEEPET LSS + S K+S EN+NL NGI+HN +EGKEYD  EK+RSELIAISFLES PE GS  V ELK
Subjt:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGSGTVTELK

TrEMBL top hitse value%identityAlignment
A0A0A0L967 Uncharacterized protein3.9e-2573.91Show/hide
Query:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGSGTVTELK
        MD TVPG N PEEVTRESLI+ISYEEPET LSS + S K+S EN+NL NGI+HN +EGKEYD  EK+RSELIAISFLES PE GS  V ELK
Subjt:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGSGTVTELK

A0A5A7U641 Uncharacterized protein3.6e-2682.35Show/hide
Query:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGS
        MDITVPG N PEEVTRESLI+ISYEEPET LSSKR S KLSSEN+NL NGI+HN VEGKEYD  EK+RSELIAISFLES PE GS
Subjt:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYD-VEKYRSELIAISFLESPPEIGS

A0A6J1HHB9 uncharacterized protein LOC1114632634.1e-2272.83Show/hide
Query:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELK
        MDITVPG N  EEVTRESLIAISY EPE+ LSSKR SGKL+S+NL        NLVEGKE+D  EKYRSELI+ISFLESPPEIGS  V +LK
Subjt:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELK

A0A6J1IHW2 uncharacterized protein LOC1114738151.8e-2273.91Show/hide
Query:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELK
        MDITVPG N  EEVTRESLIAISY EPE+ LSSKR SGKL+S+NL        NLVEGKE+D  EKYRSELIAISFLESPPEIGS  V +LK
Subjt:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDV-EKYRSELIAISFLESPPEIGSGTVTELK

W9RTT6 Uncharacterized protein2.6e-0855.7Show/hide
Query:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESP
        MD T P    PEEVTRESLI+ISY  PE  L+SK SS KL+ E  NLV GID    +G+    +K+RSELI+IS+ +SP
Subjt:  MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATATAACAGTACCTGGTGGGAATGATCCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATTTCTTACGAGGAACCAGAAACAACTCTCTCTTCCAAGCGATCATC
TGGAAAGCTCAGTAGCGAAAACCTCAATCTGGTCAACGGGATAGACCACAATCTGGTGGAAGGGAAAGAATATGATGTAGAGAAATATAGATCTGAGCTGATAGCTATTT
CCTTTCTTGAGTCACCACCTGAAATTGGAAGTGGAACCGTGACCGAACTCAAGGTAACAATTTTCTCTTCAAAGCAATCATCTGGAAAGCTTGGTAGCGAAAACCTCAAT
CTGGTCAATGAGATAGACCACAATCTGGTGAAAGGGAAAGAATACAATGATGATAAATATAGATCTGAGCTGACAGCTATTTCCTTCCTCGAGTCACCACCTGAAATTGG
AAGTGGAACAGTGGCCGAACACAAGGGTCAGGAGGCAGTGGGCGTCATTGATGAAAACAAAGAAACGGGTTTAAAGCATGCTGAAAGGCCAATCAAAGTGTTTGGAGAAC
AAATTCAGTTAAGTATTCTGAGGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATATAACAGTACCTGGTGGGAATGATCCTGAGGAAGTGACTCGTGAGTCGCTTATCGCCATTTCTTACGAGGAACCAGAAACAACTCTCTCTTCCAAGCGATCATC
TGGAAAGCTCAGTAGCGAAAACCTCAATCTGGTCAACGGGATAGACCACAATCTGGTGGAAGGGAAAGAATATGATGTAGAGAAATATAGATCTGAGCTGATAGCTATTT
CCTTTCTTGAGTCACCACCTGAAATTGGAAGTGGAACCGTGACCGAACTCAAGGTAACAATTTTCTCTTCAAAGCAATCATCTGGAAAGCTTGGTAGCGAAAACCTCAAT
CTGGTCAATGAGATAGACCACAATCTGGTGAAAGGGAAAGAATACAATGATGATAAATATAGATCTGAGCTGACAGCTATTTCCTTCCTCGAGTCACCACCTGAAATTGG
AAGTGGAACAGTGGCCGAACACAAGGGTCAGGAGGCAGTGGGCGTCATTGATGAAAACAAAGAAACGGGTTTAAAGCATGCTGAAAGGCCAATCAAAGTGTTTGGAGAAC
AAATTCAGTTAAGTATTCTGAGGCTGTAAATTTTGTTGGGATTTGGACCAAACAGACACTTGGCTTTCATGATTTTTGCAAATGGGGCTCTGAATAATTTGTGGGGGTTG
CAAAGGCTAAAATGCGGTGAAGAAC
Protein sequenceShow/hide protein sequence
MDITVPGGNDPEEVTRESLIAISYEEPETTLSSKRSSGKLSSENLNLVNGIDHNLVEGKEYDVEKYRSELIAISFLESPPEIGSGTVTELKVTIFSSKQSSGKLGSENLN
LVNEIDHNLVKGKEYNDDKYRSELTAISFLESPPEIGSGTVAEHKGQEAVGVIDENKETGLKHAERPIKVFGEQIQLSILRL