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Carg14899 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14899
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr14:13630832..13633144
RNA-Seq ExpressionCarg14899
SyntenyCarg14899
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAH91849.1 Os02g0691901 [Oryza sativa Japonica Group]2.2e-0537.27Show/hide
Query:  CDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGSSSVP------AIFGDDGVVAYHNEGASQDSNDGDDERRE-ISGGIAIAA---IAKRWR
        CD +D+ ++   R+R + +L+    +  +        S G   SVP      A+ G DGVVA   EGA +  +DGDDERRE  +GG+  A    +  R R
Subjt:  CDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGSSSVP------AIFGDDGVVAYHNEGASQDSNDGDDERRE-ISGGIAIAA---IAKRWR

Query:  WWKDDVAPLR
        W +D+VAPLR
Subjt:  WWKDDVAPLR

KAG7018889.1 hypothetical protein SDJN02_20762, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-89100Show/hide
Query:  MIKGKGLDMEFLHFTSISISKINKYSSMDQNSGESDGRISSGPFSAKFPKSFSKLRSSFQNSNIANQDCDGLDESMIQACRRRRSLQLVFMADLGKIFFI
        MIKGKGLDMEFLHFTSISISKINKYSSMDQNSGESDGRISSGPFSAKFPKSFSKLRSSFQNSNIANQDCDGLDESMIQACRRRRSLQLVFMADLGKIFFI
Subjt:  MIKGKGLDMEFLHFTSISISKINKYSSMDQNSGESDGRISSGPFSAKFPKSFSKLRSSFQNSNIANQDCDGLDESMIQACRRRRSLQLVFMADLGKIFFI

Query:  IHFHDSVGGSSSVPAIFGDDGVVAYHNEGASQDSNDGDDERREISGGIAIAAIAKRWRWWKDDVAPLRT
        IHFHDSVGGSSSVPAIFGDDGVVAYHNEGASQDSNDGDDERREISGGIAIAAIAKRWRWWKDDVAPLRT
Subjt:  IHFHDSVGGSSSVPAIFGDDGVVAYHNEGASQDSNDGDDERREISGGIAIAAIAKRWRWWKDDVAPLRT

KAG7028734.1 hypothetical protein SDJN02_09915, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-0558.18Show/hide
Query:  HFTSISISKINKYSSMDQNSGESDGRISSGPFSAKFPKSFSKLRSSFQNSNIANQ
        +F  +S   IN   +  QNSG++DGRI SGPFSAKFP+SFSKLR  FQ++++ANQ
Subjt:  HFTSISISKINKYSSMDQNSGESDGRISSGPFSAKFPKSFSKLRSSFQNSNIANQ

VVA96343.1 unnamed protein product [Arabis nemorensis]3.1e-0451.79Show/hide
Query:  AIFGDDGVVAYHNEGASQDSNDGDDERREISGGIAIAAI-AKRWRWWKDDVAPLRT
        A+FGD+ VVA  +EG S+DS++ D+ERREI GG  +  +  +R R W+D V PLRT
Subjt:  AIFGDDGVVAYHNEGASQDSNDGDDERREISGGIAIAAI-AKRWRWWKDDVAPLRT

TrEMBL top hitse value%identityAlignment
A0A0D3F962 Uncharacterized protein1.0e-0537.27Show/hide
Query:  CDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGSSSVP------AIFGDDGVVAYHNEGASQDSNDGDDERRE-ISGGIAIAA---IAKRWR
        CD +D+ ++   R+R + +L+    +  +        S G   SVP      A+ G DGVVA   EGA +  +DGDDERRE  +GG+  A    +  R R
Subjt:  CDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGSSSVP------AIFGDDGVVAYHNEGASQDSNDGDDERRE-ISGGIAIAA---IAKRWR

Query:  WWKDDVAPLR
        W +D+VAPLR
Subjt:  WWKDDVAPLR

A0A0D9YWQ7 Uncharacterized protein1.0e-0537.27Show/hide
Query:  CDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGSSSVP------AIFGDDGVVAYHNEGASQDSNDGDDERRE-ISGGIAIAA---IAKRWR
        CD +D+ ++   R+R + +L+    +  +        S G   SVP      A+ G DGVVA   EGA +  +DGDDERRE  +GG+  A    +  R R
Subjt:  CDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGSSSVP------AIFGDDGVVAYHNEGASQDSNDGDDERRE-ISGGIAIAA---IAKRWR

Query:  WWKDDVAPLR
        W +D+VAPLR
Subjt:  WWKDDVAPLR

A0A0N7KFW9 Os02g0691901 protein1.0e-0537.27Show/hide
Query:  CDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGSSSVP------AIFGDDGVVAYHNEGASQDSNDGDDERRE-ISGGIAIAA---IAKRWR
        CD +D+ ++   R+R + +L+    +  +        S G   SVP      A+ G DGVVA   EGA +  +DGDDERRE  +GG+  A    +  R R
Subjt:  CDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGSSSVP------AIFGDDGVVAYHNEGASQDSNDGDDERRE-ISGGIAIAA---IAKRWR

Query:  WWKDDVAPLR
        W +D+VAPLR
Subjt:  WWKDDVAPLR

A0A565B4R3 Uncharacterized protein1.5e-0451.79Show/hide
Query:  AIFGDDGVVAYHNEGASQDSNDGDDERREISGGIAIAAI-AKRWRWWKDDVAPLRT
        A+FGD+ VVA  +EG S+DS++ D+ERREI GG  +  +  +R R W+D V PLRT
Subjt:  AIFGDDGVVAYHNEGASQDSNDGDDERREISGGIAIAAI-AKRWRWWKDDVAPLRT

C7IZ11 Os02g0691900 protein1.0e-0537.27Show/hide
Query:  CDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGSSSVP------AIFGDDGVVAYHNEGASQDSNDGDDERRE-ISGGIAIAA---IAKRWR
        CD +D+ ++   R+R + +L+    +  +        S G   SVP      A+ G DGVVA   EGA +  +DGDDERRE  +GG+  A    +  R R
Subjt:  CDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGSSSVP------AIFGDDGVVAYHNEGASQDSNDGDDERRE-ISGGIAIAA---IAKRWR

Query:  WWKDDVAPLR
        W +D+VAPLR
Subjt:  WWKDDVAPLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAAAAGGAAAAGGCTTAGACATGGAGTTCTTACATTTTACCTCCATTAGTATTTCAAAAATCAATAAATATTCAAGCATGGACCAGAATTCAGGTGAAAGTGATGG
AAGGATATCTAGTGGTCCATTTTCCGCAAAATTCCCAAAGTCTTTTTCGAAGTTGAGAAGTAGCTTTCAGAACTCCAATATAGCGAACCAAGACTGTGATGGACTCGATG
AGAGCATGATCCAGGCCTGTAGGAGGAGGAGGAGCTTGCAGCTGGTTTTCATGGCGGATTTGGGTAAGATTTTCTTCATCATCCATTTCCATGACAGCGTTGGTGGTAGC
AGCTCTGTTCCTGCAATATTTGGAGATGATGGTGTAGTAGCTTACCATAATGAAGGCGCTAGCCAAGATTCCAATGATGGCGATGATGAGAGGAGAGAAATCAGTGGCGG
AATCGCCATTGCTGCCATAGCCAAAAGGTGGAGGTGGTGGAAAGATGATGTAGCACCACTGAGGACA
mRNA sequenceShow/hide mRNA sequence
AATGGAGATAGTATTCCCCACTTATAAACCCATGATCTTTCTCTAAATTAACCAATGTGGGACTCACTTCCAACAATCCTCAACAAGCACTTCATTGAGATATCCGTGAT
ATCAAGGGTAAGTGCCTCTATCTTATTGGTTATTTTCTTAAATAATCATCTCTCACTTCAATGAGAAAAGAGAACTACAATGATAAAAGGAAAAGGCTTAGACATGGAGT
TCTTACATTTTACCTCCATTAGTATTTCAAAAATCAATAAATATTCAAGCATGGACCAGAATTCAGGTGAAAGTGATGGAAGGATATCTAGTGGTCCATTTTCCGCAAAA
TTCCCAAAGTCTTTTTCGAAGTTGAGAAGTAGCTTTCAGAACTCCAATATAGCGAACCAAGACTGTGATGGACTCGATGAGAGCATGATCCAGGCCTGTAGGAGGAGGAG
GAGCTTGCAGCTGGTTTTCATGGCGGATTTGGGTAAGATTTTCTTCATCATCCATTTCCATGACAGCGTTGGTGGTAGCAGCTCTGTTCCTGCAATATTTGGAGATGATG
GTGTAGTAGCTTACCATAATGAAGGCGCTAGCCAAGATTCCAATGATGGCGATGATGAGAGGAGAGAAATCAGTGGCGGAATCGCCATTGCTGCCATAGCCAAAAGGTGG
AGGTGGTGGAAAGATGATGTAGCACCACTGAGGACA
Protein sequenceShow/hide protein sequence
MIKGKGLDMEFLHFTSISISKINKYSSMDQNSGESDGRISSGPFSAKFPKSFSKLRSSFQNSNIANQDCDGLDESMIQACRRRRSLQLVFMADLGKIFFIIHFHDSVGGS
SSVPAIFGDDGVVAYHNEGASQDSNDGDDERREISGGIAIAAIAKRWRWWKDDVAPLRT