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Carg14912 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14912
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein RALF-like 24
Genome locationCarg_Chr14:13581184..13581564
RNA-Seq ExpressionCarg14912
SyntenyCarg14912
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582492.1 Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia]1.6e-66100Show/hide
Query:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
Subjt:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
        PGPANSYDRGCEVITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

XP_008438316.1 PREDICTED: protein RALF-like 24 isoform X1 [Cucumis melo]1.3e-6095Show/hide
Query:  FFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANS
        FFLFSI+ PLVFLQTHFSFCDAILDLRS KGSE+DVMAKGVCNQKIGECLT+PEMESE+SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANS
Subjt:  FFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANS

Query:  YDRGCEVITRCARDVHDINT
        YDRGCEVITRCARDVHDINT
Subjt:  YDRGCEVITRCARDVHDINT

XP_022974738.1 protein RALF-like 24 [Cucurbita maxima]1.8e-6088.89Show/hide
Query:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        M  PTLFFL SILLPL+FLQTHF FCDA+LDLRSLKG++ID+M KGVCNQKIGECLTEP+MESE+SRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECH
Subjt:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
        PGPANSYDRGCEVITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

XP_023526933.1 protein RALF-like 24 [Cucurbita pepo subsp. pepo]1.6e-66100Show/hide
Query:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
Subjt:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
        PGPANSYDRGCEVITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

XP_038875978.1 protein RALF-like 24 [Benincasa hispida]4.9e-6393.65Show/hide
Query:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        M NP LFF FSILLPLVFLQTHFSFCDAILDLRS KGSE+D+MAKGVCNQKIGECLTEPEMESE+SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
Subjt:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
        PGPANSYDRGCE+ITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

TrEMBL top hitse value%identityAlignment
A0A0A0L7V8 Uncharacterized protein8.5e-6194.21Show/hide
Query:  LFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPAN
        LFFLFSI+ PLVFLQTHFSFCDAILDLRS KGSE++VMAKGVCNQKIGECLT+PEMESE+SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPAN
Subjt:  LFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPAN

Query:  SYDRGCEVITRCARDVHDINT
        SYDRGCEVITRCARDVHDINT
Subjt:  SYDRGCEVITRCARDVHDINT

A0A1S3AWQ1 protein RALF-like 24 isoform X16.5e-6195Show/hide
Query:  FFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANS
        FFLFSI+ PLVFLQTHFSFCDAILDLRS KGSE+DVMAKGVCNQKIGECLT+PEMESE+SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANS
Subjt:  FFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANS

Query:  YDRGCEVITRCARDVHDINT
        YDRGCEVITRCARDVHDINT
Subjt:  YDRGCEVITRCARDVHDINT

A0A5D3CZU4 Protein RALF-like 24 isoform X16.5e-6195Show/hide
Query:  FFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANS
        FFLFSI+ PLVFLQTHFSFCDAILDLRS KGSE+DVMAKGVCNQKIGECLT+PEMESE+SRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANS
Subjt:  FFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANS

Query:  YDRGCEVITRCARDVHDINT
        YDRGCEVITRCARDVHDINT
Subjt:  YDRGCEVITRCARDVHDINT

A0A6J1D019 protein RALF-like 24 isoform X13.3e-5787.3Show/hide
Query:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        M  P+L +L  ILL +VF  THFSFCDAILDLRSLKGS+IDVMAKGVCNQKIGECLTEPEMESE SRRVLMMQKKYISYDTL+RDMVPC+RPGVSYYECH
Subjt:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
         GPANSYDRGCEVITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

A0A6J1IH73 protein RALF-like 248.5e-6188.89Show/hide
Query:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        M  PTLFFL SILLPL+FLQTHF FCDA+LDLRSLKG++ID+M KGVCNQKIGECLTEP+MESE+SRRVLMMQK+YISY+TLRRDMVPCSRPGVSYYECH
Subjt:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
        PGPANSYDRGCEVITRCARDVHDINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

SwissProt top hitse value%identityAlignment
Q2HIM9 Protein RALF-like 312.7e-2453.17Show/hide
Query:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        M N T   +F+IL  L+         DA   + S  G EID M   + N  IGE   E  M +E+SRRVLM QK+YI Y+TLRRDMVPC +PG SYY+C 
Subjt:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
         G ANSY RGC+ ITRCARD +DINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

Q8L9P8 Protein RALF-like 331.5e-1444.74Show/hide
Query:  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECL-----TEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PAN
        + + +  L  HF F  A+    S  G  + + +K  CN  I EC       E EM+SE++RR+L    KYISY  LRR+ VPCSR G SYY C  G  AN
Subjt:  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECL-----TEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PAN

Query:  SYDRGCEVITRCAR
         Y RGC  ITRC R
Subjt:  SYDRGCEVITRCAR

Q945T0 Rapid alkalinization factor2.3e-1555.26Show/hide
Query:  GVCNQKIGECLTEP---EMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC
        G C   IGEC+ E    E++SE +RR+L   KKYISY  L+++ VPCSR G SYY C PG  AN Y RGC  ITRC
Subjt:  GVCNQKIGECLTEP---EMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC

Q9LK37 Protein RALF-like 247.7e-2756.52Show/hide
Query:  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGC
        + L L+ LQTH S     + + S+ G EID M     N  IGE   E  M SE+SRRV+MM+K+YISY+TLRRDMVPC +PG SYY C  G AN+Y+RGC
Subjt:  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGC

Query:  EVITRCARDVHDINT
         VITRCARD +DI T
Subjt:  EVITRCARDVHDINT

Q9MA62 Protein RALF-like 221.8e-1555.26Show/hide
Query:  CNQKIGECLTEP---EMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR
        C   I EC+ E    E +S++SRR+L  QKKYISY  +RR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  CNQKIGECLTEP---EMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 19.1e-1553.42Show/hide
Query:  CNQKIGECL--TEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC
        C+  I EC+   E EM+SE++RR+L    KYISY +L+R+ VPCSR G SYY C  G  AN Y RGC  I RC
Subjt:  CNQKIGECL--TEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRC

AT3G05490.1 ralf-like 221.3e-1655.26Show/hide
Query:  CNQKIGECLTEP---EMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR
        C   I EC+ E    E +S++SRR+L  QKKYISY  +RR+ VPCSR G SYY C  G  AN Y RGC  ITRC R
Subjt:  CNQKIGECLTEP---EMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PANSYDRGCEVITRCAR

AT3G23805.1 ralf-like 245.5e-2856.52Show/hide
Query:  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGC
        + L L+ LQTH S     + + S+ G EID M     N  IGE   E  M SE+SRRV+MM+K+YISY+TLRRDMVPC +PG SYY C  G AN+Y+RGC
Subjt:  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRGC

Query:  EVITRCARDVHDINT
         VITRCARD +DI T
Subjt:  EVITRCARDVHDINT

AT4G13950.1 ralf-like 312.0e-2553.17Show/hide
Query:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH
        M N T   +F+IL  L+         DA   + S  G EID M   + N  IGE   E  M +E+SRRVLM QK+YI Y+TLRRDMVPC +PG SYY+C 
Subjt:  MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECH

Query:  PGPANSYDRGCEVITRCARDVHDINT
         G ANSY RGC+ ITRCARD +DINT
Subjt:  PGPANSYDRGCEVITRCARDVHDINT

AT4G15800.1 ralf-like 331.1e-1544.74Show/hide
Query:  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECL-----TEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PAN
        + + +  L  HF F  A+    S  G  + + +K  CN  I EC       E EM+SE++RR+L    KYISY  LRR+ VPCSR G SYY C  G  AN
Subjt:  ILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECL-----TEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPG-PAN

Query:  SYDRGCEVITRCAR
         Y RGC  ITRC R
Subjt:  SYDRGCEVITRCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAATCCCACTCTCTTCTTCCTTTTTTCCATCCTTCTTCCACTTGTTTTCCTGCAAACCCATTTCTCATTCTGTGATGCGATTCTTGATCTTAGATCTTTGAAGGG
CAGTGAAATCGATGTTATGGCAAAAGGGGTTTGCAATCAGAAGATCGGGGAGTGCCTGACTGAGCCAGAAATGGAATCAGAAGTCAGTAGGAGAGTTCTGATGATGCAGA
AGAAGTATATAAGCTATGACACCCTTAGGAGGGACATGGTTCCTTGTTCAAGACCAGGCGTTTCATATTATGAATGCCATCCTGGTCCAGCAAATTCTTATGACAGAGGC
TGCGAGGTCATTACCAGATGTGCTAGAGATGTGCACGACATAAACACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCAAATCCCACTCTCTTCTTCCTTTTTTCCATCCTTCTTCCACTTGTTTTCCTGCAAACCCATTTCTCATTCTGTGATGCGATTCTTGATCTTAGATCTTTGAAGGG
CAGTGAAATCGATGTTATGGCAAAAGGGGTTTGCAATCAGAAGATCGGGGAGTGCCTGACTGAGCCAGAAATGGAATCAGAAGTCAGTAGGAGAGTTCTGATGATGCAGA
AGAAGTATATAAGCTATGACACCCTTAGGAGGGACATGGTTCCTTGTTCAAGACCAGGCGTTTCATATTATGAATGCCATCCTGGTCCAGCAAATTCTTATGACAGAGGC
TGCGAGGTCATTACCAGATGTGCTAGAGATGTGCACGACATAAACACTTGA
Protein sequenceShow/hide protein sequence
MPNPTLFFLFSILLPLVFLQTHFSFCDAILDLRSLKGSEIDVMAKGVCNQKIGECLTEPEMESEVSRRVLMMQKKYISYDTLRRDMVPCSRPGVSYYECHPGPANSYDRG
CEVITRCARDVHDINT