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Carg14934 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg14934
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionMADS-box protein FBP24-like isoform X2
Genome locationCarg_Chr07:144064..144596
RNA-Seq ExpressionCarg14934
SyntenyCarg14934
Gene Ontology termsGO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0048316 - seed development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000977 - RNA polymerase II regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594387.1 MADS-box protein FBP24, partial [Cucurbita argyrosperma subsp. sororia]7.0e-7296.69Show/hide
Query:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH
        MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDH HQHQHLH   +HHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH
Subjt:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH

Query:  PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP
        PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP
Subjt:  PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP

KAG7026392.1 hypothetical protein SDJN02_10392, partial [Cucurbita argyrosperma subsp. argyrosperma]1.6e-76100Show/hide
Query:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH
        MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH
Subjt:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH

Query:  PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP
        PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP
Subjt:  PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP

XP_022926519.1 MADS-box protein FBP24-like isoform X1 [Cucurbita moschata]1.4e-6484.52Show/hide
Query:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ-------------HLHLHQNHHHHHH-------HHGV-EDQAVVS
        MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ             H H HQNHHHHHH       HHGV +DQAVV 
Subjt:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ-------------HLHLHQNHHHHHH-------HHGV-EDQAVVS

Query:  MEGDDDDHGDAFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT
        MEGDDDDHG+AFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT
Subjt:  MEGDDDDHGDAFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT

XP_022926520.1 MADS-box protein FBP24-like isoform X2 [Cucurbita moschata]1.4e-6484.52Show/hide
Query:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ-------------HLHLHQNHHHHHH-------HHGV-EDQAVVS
        MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ             H H HQNHHHHHH       HHGV +DQAVV 
Subjt:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ-------------HLHLHQNHHHHHH-------HHGV-EDQAVVS

Query:  MEGDDDDHGDAFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT
        MEGDDDDHG+AFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT
Subjt:  MEGDDDDHGDAFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT

XP_023003624.1 MADS-box protein FBP24-like isoform X2 [Cucurbita maxima]7.0e-6489.4Show/hide
Query:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH
        MLEDENEQIYHLIKEQQMAME+QQ VAAAMMMQKRRSEEEEMRIRRP DH  Q Q    HQ  HHHHHHHGVED+AVV MEGDD DHGDAFGFSNPHIIH
Subjt:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH

Query:  PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP
        PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTY TP
Subjt:  PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP

TrEMBL top hitse value%identityAlignment
A0A6J1EF55 MADS-box protein FBP24-like isoform X34.4e-6492.57Show/hide
Query:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGV-EDQAVVSMEGDDDDHGDAFGFSNPHII
        MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ+ H H +H HHH HHGV +DQAVV MEGDDDDHG+AFGFSNPHII
Subjt:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGV-EDQAVVSMEGDDDDHGDAFGFSNPHII

Query:  HPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT
        HPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT
Subjt:  HPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT

A0A6J1EFC0 MADS-box protein FBP24-like isoform X16.8e-6584.52Show/hide
Query:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ-------------HLHLHQNHHHHHH-------HHGV-EDQAVVS
        MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ             H H HQNHHHHHH       HHGV +DQAVV 
Subjt:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ-------------HLHLHQNHHHHHH-------HHGV-EDQAVVS

Query:  MEGDDDDHGDAFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT
        MEGDDDDHG+AFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT
Subjt:  MEGDDDDHGDAFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT

A0A6J1ELC6 MADS-box protein FBP24-like isoform X26.8e-6584.52Show/hide
Query:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ-------------HLHLHQNHHHHHH-------HHGV-EDQAVVS
        MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ             H H HQNHHHHHH       HHGV +DQAVV 
Subjt:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQ-------------HLHLHQNHHHHHH-------HHGV-EDQAVVS

Query:  MEGDDDDHGDAFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT
        MEGDDDDHG+AFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT
Subjt:  MEGDDDDHGDAFGFSNPHIIHPHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTT

A0A6J1KTV0 MADS-box protein FBP24-like isoform X23.4e-6489.4Show/hide
Query:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH
        MLEDENEQIYHLIKEQQMAME+QQ VAAAMMMQKRRSEEEEMRIRRP DH  Q Q    HQ  HHHHHHHGVED+AVV MEGDD DHGDAFGFSNPHIIH
Subjt:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH

Query:  PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP
        PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTY TP
Subjt:  PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP

A0A6J1KX33 MADS-box protein FBP24-like isoform X13.4e-6489.4Show/hide
Query:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH
        MLEDENEQIYHLIKEQQMAME+QQ VAAAMMMQKRRSEEEEMRIRRP DH  Q Q    HQ  HHHHHHHGVED+AVV MEGDD DHGDAFGFSNPHIIH
Subjt:  MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIH

Query:  PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP
        PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTY TP
Subjt:  PHLQLQLHPHEPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGAGGATGAAAATGAACAAATCTACCATTTGATAAAAGAGCAGCAGATGGCGATGGAGCAGCAGCAGGATGTAGCGGCGGCGATGATGATGCAGAAACGAAGAAG
CGAAGAGGAAGAGATGAGAATTAGGAGGCCGGAAGATCATCAGCATCAGCATCAGCATCTGCATCTGCATCAGAATCATCATCATCATCATCATCACCATGGCGTTGAAG
ATCAGGCAGTTGTAAGTATGGAAGGCGATGATGATGATCATGGCGATGCTTTCGGGTTCAGTAATCCTCACATTATCCATCCCCACCTGCAACTTCAGCTTCATCCTCAT
GAGCCCAACAGCGTTCTTCAGCTGGGCGGCCCACTCCCTCCTCCTCCGCCGCCCTTCCTCCACCCCTACCGCCTTCAGCCCTTCCAGCCCAACCTCCATTCCTCCACTAC
TTACCCTACCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGGAGGATGAAAATGAACAAATCTACCATTTGATAAAAGAGCAGCAGATGGCGATGGAGCAGCAGCAGGATGTAGCGGCGGCGATGATGATGCAGAAACGAAGAAG
CGAAGAGGAAGAGATGAGAATTAGGAGGCCGGAAGATCATCAGCATCAGCATCAGCATCTGCATCTGCATCAGAATCATCATCATCATCATCATCACCATGGCGTTGAAG
ATCAGGCAGTTGTAAGTATGGAAGGCGATGATGATGATCATGGCGATGCTTTCGGGTTCAGTAATCCTCACATTATCCATCCCCACCTGCAACTTCAGCTTCATCCTCAT
GAGCCCAACAGCGTTCTTCAGCTGGGCGGCCCACTCCCTCCTCCTCCGCCGCCCTTCCTCCACCCCTACCGCCTTCAGCCCTTCCAGCCCAACCTCCATTCCTCCACTAC
TTACCCTACCCCTTGA
Protein sequenceShow/hide protein sequence
MLEDENEQIYHLIKEQQMAMEQQQDVAAAMMMQKRRSEEEEMRIRRPEDHQHQHQHLHLHQNHHHHHHHHGVEDQAVVSMEGDDDDHGDAFGFSNPHIIHPHLQLQLHPH
EPNSVLQLGGPLPPPPPPFLHPYRLQPFQPNLHSSTTYPTP